RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 NRXN2Q9P2S2 1712 aa15.53■□□□□ 0.08
CLN8-207ENST00000524258 MAP3K15Q6ZN16 1313 aa15.52■□□□□ 0.08
CLN8-207ENST00000524258 ELL2O00472 640 aaPredicted RBP15.52■□□□□ 0.08
CLN8-207ENST00000524258 SERPINB2P05120 415 aa15.52■□□□□ 0.08
CLN8-207ENST00000524258 KIF13BQ9NQT8 1826 aa15.52■□□□□ 0.07
CLN8-207ENST00000524258 KIAA1551Q9HCM1 1747 aa15.51■□□□□ 0.07
CLN8-207ENST00000524258 UTRNP46939 3433 aa15.51■□□□□ 0.07
CLN8-207ENST00000524258 KCNA3P22001 575 aa15.51■□□□□ 0.07
CLN8-207ENST00000524258 PXDNLA1KZ92 1463 aa15.51■□□□□ 0.07
CLN8-207ENST00000524258 BICDL1Q6ZP65 573 aa15.5■□□□□ 0.07
CLN8-207ENST00000524258 COPS6Q7L5N1 327 aa15.5■□□□□ 0.07
CLN8-207ENST00000524258 XAGE3Q8WTP9 111 aa15.5■□□□□ 0.07
CLN8-207ENST00000524258 DBF4Q9UBU7 674 aaPredicted RBP15.5■□□□□ 0.07
CLN8-207ENST00000524258 CARMIL3Q8ND23 1372 aa15.49■□□□□ 0.07
CLN8-207ENST00000524258 VAMP4O75379 141 aa15.49■□□□□ 0.07
CLN8-207ENST00000524258 TGFB2P61812 414 aa15.49■□□□□ 0.07
CLN8-207ENST00000524258 GIGYF2Q6Y7W6 1299 aaKnown RBP15.49■□□□□ 0.07
CLN8-207ENST00000524258 ZNF34Q8IZ26 560 aa15.49■□□□□ 0.07
CLN8-207ENST00000524258 TRMT2AQ8IZ69 625 aaKnown RBP15.49■□□□□ 0.07
CLN8-207ENST00000524258 KLHL34Q8N239 644 aa15.49■□□□□ 0.07
CLN8-207ENST00000524258 AFDNP55196 1824 aaKnown RBP15.49■□□□□ 0.07
CLN8-207ENST00000524258 ATP10DQ9P241 1426 aa15.49■□□□□ 0.07
CLN8-207ENST00000524258 EXOSC9Q06265 439 aaKnown RBP15.48■□□□□ 0.07
CLN8-207ENST00000524258 PRR5LQ6MZQ0 368 aa15.48■□□□□ 0.07
CLN8-207ENST00000524258 NPM2Q86SE8 214 aaKnown RBP15.48■□□□□ 0.07
CLN8-207ENST00000524258 SETDB2Q96T68 719 aa15.48■□□□□ 0.07
CLN8-207ENST00000524258 ZBTB3Q9H5J0 574 aa15.48■□□□□ 0.07
CLN8-207ENST00000524258 UBN2Q6ZU65 1347 aa15.47■□□□□ 0.07
CLN8-207ENST00000524258 A0A0G2JLW4 131 aa15.47■□□□□ 0.07
CLN8-207ENST00000524258 DPEP1P16444 411 aa15.47■□□□□ 0.07
CLN8-207ENST00000524258 YBX3P16989 372 aaKnown RBP eCLIP15.47■□□□□ 0.07
CLN8-207ENST00000524258 SLFN5Q08AF3 891 aa15.47■□□□□ 0.07
CLN8-207ENST00000524258 TWISTNBQ3B726 338 aaPredicted RBP15.47■□□□□ 0.07
CLN8-207ENST00000524258 PHAXQ9H814 394 aaKnown RBP15.47■□□□□ 0.07
CLN8-207ENST00000524258 HYPKQ9NX55 129 aa15.47■□□□□ 0.07
CLN8-207ENST00000524258 ZNF652Q9Y2D9 606 aa15.47■□□□□ 0.07
CLN8-207ENST00000524258 GOLGA2Q08379 1002 aa15.46■□□□□ 0.07
CLN8-207ENST00000524258 KIF6Q6ZMV9 814 aa15.46■□□□□ 0.07
CLN8-207ENST00000524258 CDCA7LQ96GN5 454 aa15.46■□□□□ 0.07
CLN8-207ENST00000524258 NIP7Q9Y221 180 aaKnown RBP eCLIP15.46■□□□□ 0.07
CLN8-207ENST00000524258 AIMP1Q12904 312 aaKnown RBP15.45■□□□□ 0.06
CLN8-207ENST00000524258 CCDC30Q5VVM6 783 aa15.45■□□□□ 0.06
CLN8-207ENST00000524258 CCDC24Q8N4L8 307 aa15.45■□□□□ 0.06
CLN8-207ENST00000524258 MYH16Q9H6N6 1097 aa15.45■□□□□ 0.06
CLN8-207ENST00000524258 NUP98P52948 1817 aa15.45■□□□□ 0.06
CLN8-207ENST00000524258 KLRG2A4D1S0 409 aaPredicted RBP15.44■□□□□ 0.06
CLN8-207ENST00000524258 CHRNA5P30532 468 aa15.44■□□□□ 0.06
CLN8-207ENST00000524258 ANKRD13DQ6ZTN6 518 aa15.44■□□□□ 0.06
CLN8-207ENST00000524258 PLBD2Q8NHP8 589 aa15.44■□□□□ 0.06
CLN8-207ENST00000524258 BRIP1Q9BX63 1249 aa15.44■□□□□ 0.06
CLN8-207ENST00000524258 E9PSI1 815 aa15.43■□□□□ 0.06
CLN8-207ENST00000524258 TCERG1O14776 1098 aaKnown RBP15.43■□□□□ 0.06
CLN8-207ENST00000524258 TCIRG1Q13488 830 aa15.43■□□□□ 0.06
CLN8-207ENST00000524258 SUSD4Q5VX71 490 aa15.43■□□□□ 0.06
CLN8-207ENST00000524258 G2E3Q7L622 706 aa15.43■□□□□ 0.06
CLN8-207ENST00000524258 ISCA1Q9BUE6 129 aa15.43■□□□□ 0.06
CLN8-207ENST00000524258 ANKRD31Q8N7Z5 1873 aa15.42■□□□□ 0.06
CLN8-207ENST00000524258 IBTKQ9P2D0 1353 aaPredicted RBP15.42■□□□□ 0.06
CLN8-207ENST00000524258 NTSR2O95665 410 aa15.42■□□□□ 0.06
CLN8-207ENST00000524258 GPTP24298 496 aa15.42■□□□□ 0.06
CLN8-207ENST00000524258 NBPF5PQ86XG9 351 aaPredicted RBP15.42■□□□□ 0.06
CLN8-207ENST00000524258 CNBD1Q8NA66 436 aa15.42■□□□□ 0.06
CLN8-207ENST00000524258 N4BP2Q86UW6 1770 aaPredicted RBP15.41■□□□□ 0.06
CLN8-207ENST00000524258 TRIM28Q13263 835 aaKnown RBP15.41■□□□□ 0.06
CLN8-207ENST00000524258 TPTE2Q6XPS3 522 aa15.41■□□□□ 0.06
CLN8-207ENST00000524258 NLRP10Q86W26 655 aa15.41■□□□□ 0.06
CLN8-207ENST00000524258 CHMP4AQ9BY43 222 aa15.41■□□□□ 0.06
CLN8-207ENST00000524258 BRCA1P38398 1863 aaKnown RBP15.4■□□□□ 0.06
CLN8-207ENST00000524258 ABCC12Q96J65 1359 aa15.4■□□□□ 0.06
CLN8-207ENST00000524258 SLC4A2P04920 1241 aa15.4■□□□□ 0.06
CLN8-207ENST00000524258 GPR162Q16538 588 aa15.4■□□□□ 0.06
CLN8-207ENST00000524258 PARP10Q53GL7 1025 aa15.4■□□□□ 0.06
CLN8-207ENST00000524258 WWC3Q9ULE0 1092 aa15.4■□□□□ 0.06
CLN8-207ENST00000524258 ADCY9O60503 1353 aa15.39■□□□□ 0.05
CLN8-207ENST00000524258 FAM177BA6PVY3 158 aa15.39■□□□□ 0.05
CLN8-207ENST00000524258 ERFEQ4G0M1 354 aa15.39■□□□□ 0.05
CLN8-207ENST00000524258 HSP90AB3PQ58FF7 597 aa15.39■□□□□ 0.05
CLN8-207ENST00000524258 SLC10A5Q5PT55 438 aa15.39■□□□□ 0.05
CLN8-207ENST00000524258 NUTM1Q86Y26 1132 aa15.39■□□□□ 0.05
CLN8-207ENST00000524258 SYNE4Q8N205 404 aa15.39■□□□□ 0.05
CLN8-207ENST00000524258 RIC1Q4ADV7 1423 aa15.39■□□□□ 0.05
CLN8-207ENST00000524258 SRGNP10124 158 aa15.38■□□□□ 0.05
CLN8-207ENST00000524258 PDE6BP35913 854 aa15.38■□□□□ 0.05
CLN8-207ENST00000524258 C2CD5Q86YS7 1000 aa15.38■□□□□ 0.05
CLN8-207ENST00000524258 PIM2Q9P1W9 311 aa15.38■□□□□ 0.05
CLN8-207ENST00000524258 ATP5J2-PTCD1G3V325 749 aa15.37■□□□□ 0.05
CLN8-207ENST00000524258 ST5P78524 1137 aa15.37■□□□□ 0.05
CLN8-207ENST00000524258 CRY2Q49AN0 593 aa15.37■□□□□ 0.05
CLN8-207ENST00000524258 KSR2Q6VAB6 950 aa15.37■□□□□ 0.05
CLN8-207ENST00000524258 C3orf67Q6ZVT6 689 aa15.37■□□□□ 0.05
CLN8-207ENST00000524258 METTL22Q9BUU2 404 aaPredicted RBP15.37■□□□□ 0.05
CLN8-207ENST00000524258 STK31Q9BXU1 1019 aa15.37■□□□□ 0.05
CLN8-207ENST00000524258 NYXQ9GZU5 481 aa15.37■□□□□ 0.05
CLN8-207ENST00000524258 PDZRN3Q9UPQ7 1066 aa15.37■□□□□ 0.05
CLN8-207ENST00000524258 PI4KAP2A4QPH2 592 aa15.36■□□□□ 0.05
CLN8-207ENST00000524258 H0YIN7 160 aa15.36■□□□□ 0.05
CLN8-207ENST00000524258 GRIN3BO60391 1043 aa15.36■□□□□ 0.05
CLN8-207ENST00000524258 IGKV5-2P06315 115 aa15.36■□□□□ 0.05
CLN8-207ENST00000524258 FLIIQ13045 1269 aa15.36■□□□□ 0.05
CLN8-207ENST00000524258 PELP1Q8IZL8 1130 aaKnown RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms