RNA–Protein interactions for RNA: ENST00000523777.5

TRAPPC9-214, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-214ENST00000523777 CHPF2Q9P2E5 772 aa20.83■□□□□ 0.93
TRAPPC9-214ENST00000523777 STK31Q9BXU1 1019 aa20.82■□□□□ 0.92
TRAPPC9-214ENST00000523777 CACNA1FO60840 1977 aa20.81■□□□□ 0.92
TRAPPC9-214ENST00000523777 DCAF8L1A6NGE4 600 aa20.81■□□□□ 0.92
TRAPPC9-214ENST00000523777 POLRMTO00411 1230 aaKnown RBP20.81■□□□□ 0.92
TRAPPC9-214ENST00000523777 LRP10Q7Z4F1 713 aa20.81■□□□□ 0.92
TRAPPC9-214ENST00000523777 KLHL34Q8N239 644 aa20.81■□□□□ 0.92
TRAPPC9-214ENST00000523777 CARMIL3Q8ND23 1372 aa20.81■□□□□ 0.92
TRAPPC9-214ENST00000523777 TBC1D9BQ66K14 1250 aa20.8■□□□□ 0.92
TRAPPC9-214ENST00000523777 COPS6Q7L5N1 327 aa20.8■□□□□ 0.92
TRAPPC9-214ENST00000523777 TSPYL6Q8N831 410 aa20.8■□□□□ 0.92
TRAPPC9-214ENST00000523777 NUP98P52948 1817 aa20.79■□□□□ 0.92
TRAPPC9-214ENST00000523777 SERPINB2P05120 415 aa20.79■□□□□ 0.92
TRAPPC9-214ENST00000523777 EXOSC9Q06265 439 aaKnown RBP20.79■□□□□ 0.92
TRAPPC9-214ENST00000523777 DDR1Q08345 913 aa20.79■□□□□ 0.92
TRAPPC9-214ENST00000523777 PROSER3Q2NL68 480 aa20.79■□□□□ 0.92
TRAPPC9-214ENST00000523777 HSP90AB3PQ58FF7 597 aa20.79■□□□□ 0.92
TRAPPC9-214ENST00000523777 GIGYF2Q6Y7W6 1299 aaKnown RBP20.79■□□□□ 0.92
TRAPPC9-214ENST00000523777 TTLL7Q6ZT98 887 aa20.79■□□□□ 0.92
TRAPPC9-214ENST00000523777 SPINK5Q9NQ38 1064 aaPredicted RBP20.79■□□□□ 0.92
TRAPPC9-214ENST00000523777 KIF13BQ9NQT8 1826 aa20.78■□□□□ 0.92
TRAPPC9-214ENST00000523777 TGFB2P61812 414 aa20.78■□□□□ 0.92
TRAPPC9-214ENST00000523777 SLFN5Q08AF3 891 aa20.78■□□□□ 0.92
TRAPPC9-214ENST00000523777 BICDL1Q6ZP65 573 aa20.78■□□□□ 0.92
TRAPPC9-214ENST00000523777 XAGE3Q8WTP9 111 aa20.78■□□□□ 0.92
TRAPPC9-214ENST00000523777 VAMP4O75379 141 aa20.77■□□□□ 0.92
TRAPPC9-214ENST00000523777 ANXA1P04083 346 aa20.77■□□□□ 0.92
TRAPPC9-214ENST00000523777 HNRNPUQ00839 825 aaKnown RBP eCLIP20.77■□□□□ 0.92
TRAPPC9-214ENST00000523777 AIMP1Q12904 312 aaKnown RBP20.77■□□□□ 0.92
TRAPPC9-214ENST00000523777 ZBTB3Q9H5J0 574 aa20.77■□□□□ 0.92
TRAPPC9-214ENST00000523777 NIP7Q9Y221 180 aaKnown RBP eCLIP20.77■□□□□ 0.92
TRAPPC9-214ENST00000523777 NRXN2Q9P2S2 1712 aa20.77■□□□□ 0.92
TRAPPC9-214ENST00000523777 C10orf71Q711Q0 1435 aa20.77■□□□□ 0.91
TRAPPC9-214ENST00000523777 ATP10DQ9P241 1426 aa20.77■□□□□ 0.91
TRAPPC9-214ENST00000523777 AFDNP55196 1824 aaKnown RBP20.76■□□□□ 0.91
TRAPPC9-214ENST00000523777 NPHP1O15259 732 aa20.76■□□□□ 0.91
TRAPPC9-214ENST00000523777 DDX58O95786 925 aaKnown RBP20.76■□□□□ 0.91
TRAPPC9-214ENST00000523777 HLFQ16534 295 aa20.76■□□□□ 0.91
TRAPPC9-214ENST00000523777 PLBD2Q8NHP8 589 aa20.76■□□□□ 0.91
TRAPPC9-214ENST00000523777 TPTE2Q6XPS3 522 aa20.75■□□□□ 0.91
TRAPPC9-214ENST00000523777 ANKRD13DQ6ZTN6 518 aa20.75■□□□□ 0.91
TRAPPC9-214ENST00000523777 ZNF428Q96B54 188 aa20.75■□□□□ 0.91
TRAPPC9-214ENST00000523777 NYXQ9GZU5 481 aa20.75■□□□□ 0.91
TRAPPC9-214ENST00000523777 PDZRN3Q9UPQ7 1066 aa20.75■□□□□ 0.91
TRAPPC9-214ENST00000523777 PARP10Q53GL7 1025 aa20.74■□□□□ 0.91
TRAPPC9-214ENST00000523777 CNBD1Q8NA66 436 aa20.74■□□□□ 0.91
TRAPPC9-214ENST00000523777 CT47B1P0C2W7 299 aaPredicted RBP20.73■□□□□ 0.91
TRAPPC9-214ENST00000523777 ST5P78524 1137 aa20.73■□□□□ 0.91
TRAPPC9-214ENST00000523777 NBPF5PQ86XG9 351 aaPredicted RBP20.73■□□□□ 0.91
TRAPPC9-214ENST00000523777 TRMT2AQ8IZ69 625 aaKnown RBP20.73■□□□□ 0.91
TRAPPC9-214ENST00000523777 SLC4A2P04920 1241 aa20.72■□□□□ 0.91
TRAPPC9-214ENST00000523777 PPP1R42Q7Z4L9 355 aa20.72■□□□□ 0.91
TRAPPC9-214ENST00000523777 IBTKQ9P2D0 1353 aaPredicted RBP20.72■□□□□ 0.91
TRAPPC9-214ENST00000523777 TCIRG1Q13488 830 aa20.71■□□□□ 0.91
TRAPPC9-214ENST00000523777 RIC3Q7Z5B4 369 aa20.71■□□□□ 0.91
TRAPPC9-214ENST00000523777 ZNF34Q8IZ26 560 aa20.71■□□□□ 0.91
TRAPPC9-214ENST00000523777 BRIP1Q9BX63 1249 aa20.71■□□□□ 0.91
TRAPPC9-214ENST00000523777 ANKRD36CQ5JPF3 1778 aa20.7■□□□□ 0.9
TRAPPC9-214ENST00000523777 GTF2E1P29083 439 aaPredicted RBP20.7■□□□□ 0.9
TRAPPC9-214ENST00000523777 PDE6BP35913 854 aa20.7■□□□□ 0.9
TRAPPC9-214ENST00000523777 PRR5LQ6MZQ0 368 aa20.7■□□□□ 0.9
TRAPPC9-214ENST00000523777 NLGN2Q8NFZ4 835 aa20.7■□□□□ 0.9
TRAPPC9-214ENST00000523777 CDCA7LQ96GN5 454 aa20.7■□□□□ 0.9
TRAPPC9-214ENST00000523777 PHAXQ9H814 394 aaKnown RBP20.7■□□□□ 0.9
TRAPPC9-214ENST00000523777 RNF123Q5XPI4 1314 aa20.7■□□□□ 0.9
TRAPPC9-214ENST00000523777 ZBED9Q6R2W3 1325 aa20.69■□□□□ 0.9
TRAPPC9-214ENST00000523777 GPTP24298 496 aa20.68■□□□□ 0.9
TRAPPC9-214ENST00000523777 TRIM28Q13263 835 aaKnown RBP20.67■□□□□ 0.9
TRAPPC9-214ENST00000523777 KSR2Q6VAB6 950 aa20.67■□□□□ 0.9
TRAPPC9-214ENST00000523777 PXDNLA1KZ92 1463 aa20.67■□□□□ 0.9
TRAPPC9-214ENST00000523777 ARFGEF2Q9Y6D5 1785 aa20.67■□□□□ 0.9
TRAPPC9-214ENST00000523777 H0YIN7 160 aa20.66■□□□□ 0.9
TRAPPC9-214ENST00000523777 FLIIQ13045 1269 aa20.66■□□□□ 0.9
TRAPPC9-214ENST00000523777 GPR162Q16538 588 aa20.66■□□□□ 0.9
TRAPPC9-214ENST00000523777 UTP14AQ9BVJ6 771 aaKnown RBP20.66■□□□□ 0.9
TRAPPC9-214ENST00000523777 UBN2Q6ZU65 1347 aa20.65■□□□□ 0.9
TRAPPC9-214ENST00000523777 GRIN3BO60391 1043 aa20.65■□□□□ 0.9
TRAPPC9-214ENST00000523777 DPEP1P16444 411 aa20.65■□□□□ 0.9
TRAPPC9-214ENST00000523777 NEXNQ0ZGT2 675 aa20.65■□□□□ 0.9
TRAPPC9-214ENST00000523777 ALDH1L2Q3SY69 923 aa20.65■□□□□ 0.9
TRAPPC9-214ENST00000523777 PIM2Q9P1W9 311 aa20.65■□□□□ 0.9
TRAPPC9-214ENST00000523777 N4BP2Q86UW6 1770 aaPredicted RBP20.64■□□□□ 0.9
TRAPPC9-214ENST00000523777 A0A0G2JLW4 131 aa20.64■□□□□ 0.89
TRAPPC9-214ENST00000523777 TCERG1O14776 1098 aaKnown RBP20.64■□□□□ 0.89
TRAPPC9-214ENST00000523777 FKBP5Q13451 457 aaPredicted RBP20.64■□□□□ 0.89
TRAPPC9-214ENST00000523777 SUSD4Q5VX71 490 aa20.64■□□□□ 0.89
TRAPPC9-214ENST00000523777 NLRP10Q86W26 655 aa20.64■□□□□ 0.89
TRAPPC9-214ENST00000523777 ISCA1Q9BUE6 129 aa20.64■□□□□ 0.89
TRAPPC9-214ENST00000523777 METTL22Q9BUU2 404 aaPredicted RBP20.64■□□□□ 0.89
TRAPPC9-214ENST00000523777 KIAA1551Q9HCM1 1747 aa20.64■□□□□ 0.89
TRAPPC9-214ENST00000523777 RIC1Q4ADV7 1423 aa20.63■□□□□ 0.89
TRAPPC9-214ENST00000523777 PI4KAP2A4QPH2 592 aa20.63■□□□□ 0.89
TRAPPC9-214ENST00000523777 FAM177BA6PVY3 158 aa20.63■□□□□ 0.89
TRAPPC9-214ENST00000523777 HSP90B1P14625 803 aaKnown RBP20.63■□□□□ 0.89
TRAPPC9-214ENST00000523777 C2CD5Q86YS7 1000 aa20.63■□□□□ 0.89
TRAPPC9-214ENST00000523777 PI4KAP1Q8N8J0 262 aa20.63■□□□□ 0.89
TRAPPC9-214ENST00000523777 MAP3K2Q9Y2U5 619 aa20.63■□□□□ 0.89
TRAPPC9-214ENST00000523777 ANKRD31Q8N7Z5 1873 aa20.62■□□□□ 0.89
TRAPPC9-214ENST00000523777 NTSR2O95665 410 aa20.62■□□□□ 0.89
TRAPPC9-214ENST00000523777 PELP1Q8IZL8 1130 aaKnown RBP20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms