RNA–Protein interactions for RNA: ENST00000523573.5

TVP23C-207, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 5

Gene TVP23C, Length 764 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-207ENST00000523573 NEUROD4Q9HD90 331 aa10□□□□□ -0.81
TVP23C-207ENST00000523573 SCHIP1Q9P0W5 487 aaPredicted RBP10□□□□□ -0.81
TVP23C-207ENST00000523573 STARD13Q9Y3M8 1113 aa10□□□□□ -0.81
TVP23C-207ENST00000523573 PCDHGA11Q9Y5H2 935 aa10□□□□□ -0.81
TVP23C-207ENST00000523573 ALBP02768 609 aa9.99□□□□□ -0.81
TVP23C-207ENST00000523573 NBPF11Q86T75 865 aa9.99□□□□□ -0.81
TVP23C-207ENST00000523573 MICALL1Q8N3F8 863 aa9.99□□□□□ -0.81
TVP23C-207ENST00000523573 L3MBTL2Q969R5 705 aa9.99□□□□□ -0.81
TVP23C-207ENST00000523573 BRPF1P55201 1214 aaPredicted RBP9.98□□□□□ -0.81
TVP23C-207ENST00000523573 SEMA3FQ13275 785 aa9.98□□□□□ -0.81
TVP23C-207ENST00000523573 WASHC4Q2M389 1173 aa9.98□□□□□ -0.81
TVP23C-207ENST00000523573 ZDHHC1Q8WTX9 485 aa9.98□□□□□ -0.81
TVP23C-207ENST00000523573 GPC6Q9Y625 555 aaPredicted RBP9.98□□□□□ -0.81
TVP23C-207ENST00000523573 EML1O00423 815 aa9.97□□□□□ -0.81
TVP23C-207ENST00000523573 NEUROD1Q13562 356 aa9.97□□□□□ -0.81
TVP23C-207ENST00000523573 TEAD4Q15561 434 aa9.97□□□□□ -0.81
TVP23C-207ENST00000523573 GRIK4Q16099 956 aa9.97□□□□□ -0.81
TVP23C-207ENST00000523573 C8orf86Q6ZUL3 223 aa9.97□□□□□ -0.81
TVP23C-207ENST00000523573 SLC30A3Q99726 388 aa9.97□□□□□ -0.81
TVP23C-207ENST00000523573 NID1P14543 1247 aa9.96□□□□□ -0.82
TVP23C-207ENST00000523573 SOX11P35716 441 aa9.96□□□□□ -0.82
TVP23C-207ENST00000523573 ADH7P40394 386 aa9.96□□□□□ -0.82
TVP23C-207ENST00000523573 SFSWAPQ12872 951 aaKnown RBP9.96□□□□□ -0.82
TVP23C-207ENST00000523573 NOS2P35228 1153 aa9.95□□□□□ -0.82
TVP23C-207ENST00000523573 ABL2P42684 1182 aa9.95□□□□□ -0.82
TVP23C-207ENST00000523573 SPEM2Q0P670 501 aa9.95□□□□□ -0.82
TVP23C-207ENST00000523573 GDPD2Q9HCC8 539 aa9.95□□□□□ -0.82
TVP23C-207ENST00000523573 ZNF232Q9UNY5 417 aa9.95□□□□□ -0.82
TVP23C-207ENST00000523573 C9orf172C9J069 976 aa9.94□□□□□ -0.82
TVP23C-207ENST00000523573 H2AFB1P0C5Y9 115 aa9.94□□□□□ -0.82
TVP23C-207ENST00000523573 H2AFB2P0C5Z0 115 aa9.94□□□□□ -0.82
TVP23C-207ENST00000523573 EML3Q32P44 896 aa9.94□□□□□ -0.82
TVP23C-207ENST00000523573 ZNF358Q9NW07 568 aa9.94□□□□□ -0.82
TVP23C-207ENST00000523573 PSME1Q06323 249 aa9.93□□□□□ -0.82
TVP23C-207ENST00000523573 LCE3BQ5TA77 95 aa9.93□□□□□ -0.82
TVP23C-207ENST00000523573 C7orf43Q8WVR3 580 aa9.93□□□□□ -0.82
TVP23C-207ENST00000523573 NOD1Q9Y239 953 aa9.93□□□□□ -0.82
TVP23C-207ENST00000523573 GTF2IP78347 998 aa9.92□□□□□ -0.82
TVP23C-207ENST00000523573 LRP8Q14114 963 aa9.92□□□□□ -0.82
TVP23C-207ENST00000523573 ADGRE1Q14246 886 aa9.92□□□□□ -0.82
TVP23C-207ENST00000523573 TRAPPC3LQ5T215 181 aa9.92□□□□□ -0.82
TVP23C-207ENST00000523573 C20orf204Q6ZNR8 217 aa9.92□□□□□ -0.82
TVP23C-207ENST00000523573 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.92□□□□□ -0.82
TVP23C-207ENST00000523573 KRTAP4-12Q9BQ66 201 aa9.92□□□□□ -0.82
TVP23C-207ENST00000523573 PIK3CDO00329 1044 aa9.91□□□□□ -0.82
TVP23C-207ENST00000523573 EPHA4P54764 986 aa9.91□□□□□ -0.82
TVP23C-207ENST00000523573 MBTPS1Q14703 1052 aa9.91□□□□□ -0.82
TVP23C-207ENST00000523573 RAB44Q7Z6P3 723 aaPredicted RBP9.91□□□□□ -0.82
TVP23C-207ENST00000523573 SLC9A9Q8IVB4 645 aa9.91□□□□□ -0.82
TVP23C-207ENST00000523573 RHPN1Q8TCX5 695 aa9.91□□□□□ -0.82
TVP23C-207ENST00000523573 SERTM1A2A2V5 107 aa9.9□□□□□ -0.82
TVP23C-207ENST00000523573 LILRB5O75023 590 aa9.9□□□□□ -0.82
TVP23C-207ENST00000523573 ELNP15502 786 aa9.9□□□□□ -0.82
TVP23C-207ENST00000523573 LZTS3O60299 673 aaPredicted RBP9.89□□□□□ -0.83
TVP23C-207ENST00000523573 TBCELQ5QJ74 424 aa9.89□□□□□ -0.83
TVP23C-207ENST00000523573 TXNRD3Q86VQ6 643 aa9.89□□□□□ -0.83
TVP23C-207ENST00000523573 BRD7Q9NPI1 651 aa9.89□□□□□ -0.83
TVP23C-207ENST00000523573 SKIP12755 728 aa9.88□□□□□ -0.83
TVP23C-207ENST00000523573 SELPP16109 830 aa9.88□□□□□ -0.83
TVP23C-207ENST00000523573 RAC1P63000 192 aa9.88□□□□□ -0.83
TVP23C-207ENST00000523573 NRG1Q02297 640 aaPredicted RBP9.88□□□□□ -0.83
TVP23C-207ENST00000523573 TNS4Q8IZW8 715 aa9.88□□□□□ -0.83
TVP23C-207ENST00000523573 CEP63Q96MT8 703 aa9.88□□□□□ -0.83
TVP23C-207ENST00000523573 A0A0A0MRY4 1105 aa9.87□□□□□ -0.83
TVP23C-207ENST00000523573 KCNQ4P56696 695 aa9.87□□□□□ -0.83
TVP23C-207ENST00000523573 SH3PXD2AQ5TCZ1 1133 aa9.87□□□□□ -0.83
TVP23C-207ENST00000523573 LENG1Q96BZ8 264 aaPredicted RBP9.87□□□□□ -0.83
TVP23C-207ENST00000523573 ANKIB1Q9P2G1 1089 aa9.87□□□□□ -0.83
TVP23C-207ENST00000523573 KCNH4Q9UQ05 1017 aa9.87□□□□□ -0.83
TVP23C-207ENST00000523573 C1orf53Q5VUE5 145 aa9.86□□□□□ -0.83
TVP23C-207ENST00000523573 HYAL3O43820 417 aaPredicted RBP9.85□□□□□ -0.83
TVP23C-207ENST00000523573 NCOA4Q13772 614 aa9.85□□□□□ -0.83
TVP23C-207ENST00000523573 NFATC2IPQ8NCF5 419 aa9.85□□□□□ -0.83
TVP23C-207ENST00000523573 HSH2DQ96JZ2 352 aa9.85□□□□□ -0.83
TVP23C-207ENST00000523573 BHMTQ93088 406 aa9.84□□□□□ -0.83
TVP23C-207ENST00000523573 TP53INP1Q96A56 240 aa9.84□□□□□ -0.83
TVP23C-207ENST00000523573 SFI1A8K8P3 1242 aa9.83□□□□□ -0.84
TVP23C-207ENST00000523573 PSMA6P60900 246 aaKnown RBP9.83□□□□□ -0.84
TVP23C-207ENST00000523573 TYRO3Q06418 890 aa9.83□□□□□ -0.84
TVP23C-207ENST00000523573 TBC1D8BQ0IIM8 1120 aa9.83□□□□□ -0.84
TVP23C-207ENST00000523573 SHISA2Q6UWI4 295 aa9.83□□□□□ -0.84
TVP23C-207ENST00000523573 UBE2OQ9C0C9 1292 aaKnown RBP9.83□□□□□ -0.84
TVP23C-207ENST00000523573 JPH1Q9HDC5 661 aaPredicted RBP9.83□□□□□ -0.84
TVP23C-207ENST00000523573 CHMP3Q9Y3E7 222 aa9.83□□□□□ -0.84
TVP23C-207ENST00000523573 HIRAP54198 1017 aaPredicted RBP9.82□□□□□ -0.84
TVP23C-207ENST00000523573 SLC6A14Q9UN76 642 aa9.82□□□□□ -0.84
TVP23C-207ENST00000523573 PHACTR1Q9C0D0 580 aa9.81□□□□□ -0.84
TVP23C-207ENST00000523573 USP21Q9UK80 565 aa9.81□□□□□ -0.84
TVP23C-207ENST00000523573 HCN4Q9Y3Q4 1203 aa9.81□□□□□ -0.84
TVP23C-207ENST00000523573 TRIM50Q86XT4 487 aa9.8□□□□□ -0.84
TVP23C-207ENST00000523573 ZNF280CQ8ND82 737 aa9.8□□□□□ -0.84
TVP23C-207ENST00000523573 NUDT8Q8WV74 236 aa9.8□□□□□ -0.84
TVP23C-207ENST00000523573 SUSD3Q96L08 255 aa9.8□□□□□ -0.84
TVP23C-207ENST00000523573 IGFLR1Q9H665 355 aa9.8□□□□□ -0.84
TVP23C-207ENST00000523573 USP17L5A8MUK1 530 aa9.79□□□□□ -0.84
TVP23C-207ENST00000523573 TPRNQ4KMQ1 711 aa9.79□□□□□ -0.84
TVP23C-207ENST00000523573 POTEAQ6S8J7 498 aa9.79□□□□□ -0.84
TVP23C-207ENST00000523573 FMR1NBQ8N0W7 255 aaPredicted RBP9.79□□□□□ -0.84
TVP23C-207ENST00000523573 DEPDC4Q8N2C3 294 aa9.79□□□□□ -0.84
TVP23C-207ENST00000523573 TPCN2Q8NHX9 752 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms