RNA–Protein interactions for RNA: ENST00000523406.1

LINC00534-203, long intergenic non-protein coding RNA 534, humanhuman

TSL 3 BASIC

Gene LINC00534, Length 812 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-203ENST00000523406 FOXK2Q01167 660 aa9.27□□□□□ -0.93
LINC00534-203ENST00000523406 ABCC10Q5T3U5 1492 aa9.27□□□□□ -0.93
LINC00534-203ENST00000523406 FAM187AA6NFU0 413 aa9.26□□□□□ -0.93
LINC00534-203ENST00000523406 A6NJY4 79 aa9.26□□□□□ -0.93
LINC00534-203ENST00000523406 RELBQ01201 579 aa9.26□□□□□ -0.93
LINC00534-203ENST00000523406 TAS1R3Q7RTX0 852 aa9.26□□□□□ -0.93
LINC00534-203ENST00000523406 TXNDC2Q86VQ3 553 aa9.26□□□□□ -0.93
LINC00534-203ENST00000523406 FHDC1Q9C0D6 1143 aaPredicted RBP9.26□□□□□ -0.93
LINC00534-203ENST00000523406 ZNF395Q9H8N7 513 aaPredicted RBP9.26□□□□□ -0.93
LINC00534-203ENST00000523406 GNEQ9Y223 722 aaKnown RBP9.26□□□□□ -0.93
LINC00534-203ENST00000523406 C21orf2O43822 256 aa9.25□□□□□ -0.93
LINC00534-203ENST00000523406 IGFBP4P22692 258 aa9.25□□□□□ -0.93
LINC00534-203ENST00000523406 SIN3AQ96ST3 1273 aa9.25□□□□□ -0.93
LINC00534-203ENST00000523406 TSPAN10Q9H1Z9 355 aaPredicted RBP9.25□□□□□ -0.93
LINC00534-203ENST00000523406 SCHIP1Q9P0W5 487 aaPredicted RBP9.25□□□□□ -0.93
LINC00534-203ENST00000523406 ANKRD30AQ9BXX3 1397 aa9.24□□□□□ -0.93
LINC00534-203ENST00000523406 DNMT1P26358 1616 aaKnown RBP9.24□□□□□ -0.93
LINC00534-203ENST00000523406 HNRNPMP52272 730 aaKnown RBP eCLIP9.24□□□□□ -0.938e-8■□□□□ 8.7
LINC00534-203ENST00000523406 CENPCQ03188 943 aa9.24□□□□□ -0.93
LINC00534-203ENST00000523406 TLR1Q15399 786 aa9.24□□□□□ -0.93
LINC00534-203ENST00000523406 TSEN34Q9BSV6 310 aaKnown RBP9.24□□□□□ -0.93
LINC00534-203ENST00000523406 IQSEC3Q9UPP2 1182 aaPredicted RBP9.24□□□□□ -0.93
LINC00534-203ENST00000523406 MAPKBP1O60336 1514 aa9.24□□□□□ -0.93
LINC00534-203ENST00000523406 KDM5BQ9UGL1 1544 aa9.23□□□□□ -0.93
LINC00534-203ENST00000523406 MEN1O00255 615 aa9.23□□□□□ -0.93
LINC00534-203ENST00000523406 NRG2O14511 850 aaPredicted RBP9.23□□□□□ -0.93
LINC00534-203ENST00000523406 CDK2AP1O14519 115 aa9.23□□□□□ -0.93
LINC00534-203ENST00000523406 SPINT1O43278 529 aa9.23□□□□□ -0.93
LINC00534-203ENST00000523406 DGAT1O75907 488 aa9.23□□□□□ -0.93
LINC00534-203ENST00000523406 FKBP5Q13451 457 aaPredicted RBP9.23□□□□□ -0.93
LINC00534-203ENST00000523406 EFCAB2Q5VUJ9 269 aa9.23□□□□□ -0.93
LINC00534-203ENST00000523406 LINC00528Q8N1L1 170 aa9.23□□□□□ -0.93
LINC00534-203ENST00000523406 GAS2L2Q8NHY3 880 aa9.23□□□□□ -0.93
LINC00534-203ENST00000523406 SCG3Q8WXD2 468 aaKnown RBP9.23□□□□□ -0.93
LINC00534-203ENST00000523406 USP3Q9Y6I4 520 aa9.23□□□□□ -0.93
LINC00534-203ENST00000523406 IVNS1ABPQ9Y6Y0 642 aa9.23□□□□□ -0.93
LINC00534-203ENST00000523406 ATAD2Q6PL18 1390 aa9.23□□□□□ -0.93
LINC00534-203ENST00000523406 GFRA3O60609 400 aa9.22□□□□□ -0.93
LINC00534-203ENST00000523406 ARID4AP29374 1257 aaPredicted RBP9.22□□□□□ -0.93
LINC00534-203ENST00000523406 SCNN1AP37088 669 aa9.22□□□□□ -0.93
LINC00534-203ENST00000523406 SMCPP49901 116 aaPredicted RBP9.22□□□□□ -0.93
LINC00534-203ENST00000523406 DIEXFQ68CQ4 756 aaKnown RBP9.22□□□□□ -0.93
LINC00534-203ENST00000523406 SLC9A9Q8IVB4 645 aa9.22□□□□□ -0.93
LINC00534-203ENST00000523406 NLRP3Q96P20 1036 aa9.22□□□□□ -0.93
LINC00534-203ENST00000523406 PURBQ96QR8 312 aaKnown RBP9.22□□□□□ -0.93
LINC00534-203ENST00000523406 MPHOSPH9Q99550 1183 aa9.22□□□□□ -0.93
LINC00534-203ENST00000523406 ARHGAP5Q13017 1502 aa9.21□□□□□ -0.93
LINC00534-203ENST00000523406 FOXO3O43524 673 aa9.21□□□□□ -0.94
LINC00534-203ENST00000523406 GPC1P35052 558 aa9.21□□□□□ -0.94
LINC00534-203ENST00000523406 ZNF295-AS1Q8N0V1 137 aa9.21□□□□□ -0.94
LINC00534-203ENST00000523406 TONSLQ96HA7 1378 aa9.21□□□□□ -0.94
LINC00534-203ENST00000523406 NCOA1Q15788 1441 aa9.21□□□□□ -0.94
LINC00534-203ENST00000523406 ZCCHC11Q5TAX3 1644 aaKnown RBP9.2□□□□□ -0.94
LINC00534-203ENST00000523406 GCC2Q8IWJ2 1684 aa9.2□□□□□ -0.94
LINC00534-203ENST00000523406 CDC42BPAQ5VT25 1732 aa9.2□□□□□ -0.94
LINC00534-203ENST00000523406 RNF144AP50876 292 aaPredicted RBP9.2□□□□□ -0.94
LINC00534-203ENST00000523406 CTC1Q2NKJ3 1217 aa9.2□□□□□ -0.94
LINC00534-203ENST00000523406 TBCELQ5QJ74 424 aa9.2□□□□□ -0.94
LINC00534-203ENST00000523406 MRPL14Q6P1L8 145 aaKnown RBP9.2□□□□□ -0.94
LINC00534-203ENST00000523406 POTEAQ6S8J7 498 aa9.2□□□□□ -0.94
LINC00534-203ENST00000523406 CRIPAKQ8N1N5 446 aa9.2□□□□□ -0.94
LINC00534-203ENST00000523406 STAG2Q8N3U4 1231 aa9.2□□□□□ -0.94
LINC00534-203ENST00000523406 COL26A1Q96A83 441 aa9.2□□□□□ -0.94
LINC00534-203ENST00000523406 INSM2Q96T92 566 aaPredicted RBP9.2□□□□□ -0.94
LINC00534-203ENST00000523406 C9orf84Q5VXU9 1444 aa9.2□□□□□ -0.94
LINC00534-203ENST00000523406 PLEKHH2Q8IVE3 1493 aa9.2□□□□□ -0.94
LINC00534-203ENST00000523406 UPP2O95045 317 aa9.19□□□□□ -0.94
LINC00534-203ENST00000523406 PKDCCQ504Y2 493 aa9.19□□□□□ -0.94
LINC00534-203ENST00000523406 FOXD4L5Q5VV16 416 aaPredicted RBP9.19□□□□□ -0.94
LINC00534-203ENST00000523406 GRIP2Q9C0E4 1043 aa9.19□□□□□ -0.94
LINC00534-203ENST00000523406 PODXL2Q9NZ53 605 aa9.19□□□□□ -0.94
LINC00534-203ENST00000523406 ADGRL2O95490 1459 aa9.19□□□□□ -0.94
LINC00534-203ENST00000523406 SHANK2Q9UPX8 1470 aa9.19□□□□□ -0.94
LINC00534-203ENST00000523406 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.19□□□□□ -0.941e-6■■■□□ 14.8
LINC00534-203ENST00000523406 PPP1R12BO60237 982 aaPredicted RBP9.18□□□□□ -0.94
LINC00534-203ENST00000523406 PLCH2O75038 1416 aa9.18□□□□□ -0.94
LINC00534-203ENST00000523406 PSMA6P60900 246 aaKnown RBP9.18□□□□□ -0.94
LINC00534-203ENST00000523406 CCDC141Q6ZP82 1450 aa9.18□□□□□ -0.94
LINC00534-203ENST00000523406 CAPN12Q6ZSI9 719 aa9.18□□□□□ -0.94
LINC00534-203ENST00000523406 NBPF15Q8N660 670 aa9.18□□□□□ -0.94
LINC00534-203ENST00000523406 ZSCAN10Q96SZ4 725 aaPredicted RBP9.18□□□□□ -0.94
LINC00534-203ENST00000523406 C2orf49Q9BVC5 232 aaPredicted RBP9.18□□□□□ -0.94
LINC00534-203ENST00000523406 GZF1Q9H116 711 aaPredicted RBP9.18□□□□□ -0.94
LINC00534-203ENST00000523406 PREX2Q70Z35 1606 aa9.17□□□□□ -0.94
LINC00534-203ENST00000523406 TTC37Q6PGP7 1564 aa9.17□□□□□ -0.94
LINC00534-203ENST00000523406 WDR7Q9Y4E6 1490 aa9.17□□□□□ -0.94
LINC00534-203ENST00000523406 ANKRD50Q9ULJ7 1429 aa9.17□□□□□ -0.94
LINC00534-203ENST00000523406 KIAA1107Q9UPP5 1409 aa9.17□□□□□ -0.94
LINC00534-203ENST00000523406 PTCD1O75127 700 aaKnown RBP9.17□□□□□ -0.94
LINC00534-203ENST00000523406 BMP2P12643 396 aa9.17□□□□□ -0.94
LINC00534-203ENST00000523406 CTSOP43234 321 aaPredicted RBP9.17□□□□□ -0.94
LINC00534-203ENST00000523406 LAPTM4AQ15012 233 aa9.17□□□□□ -0.94
LINC00534-203ENST00000523406 TEAD4Q15561 434 aa9.17□□□□□ -0.94
LINC00534-203ENST00000523406 TRIM46Q7Z4K8 759 aa9.17□□□□□ -0.94
LINC00534-203ENST00000523406 ZDHHC1Q8WTX9 485 aa9.17□□□□□ -0.94
LINC00534-203ENST00000523406 MKNK1Q9BUB5 465 aa9.17□□□□□ -0.94
LINC00534-203ENST00000523406 KDM6BO15054 1643 aa9.16□□□□□ -0.94
LINC00534-203ENST00000523406 ARHGEF5Q12774 1597 aa9.16□□□□□ -0.94
LINC00534-203ENST00000523406 MBD5Q9P267 1494 aa9.16□□□□□ -0.94
LINC00534-203ENST00000523406 KIF15Q9NS87 1388 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms