RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 CCNYL3P0C7X3 344 aa9.64□□□□□ -0.87
VPS13B-211ENST00000522802 FLIIQ13045 1269 aa9.64□□□□□ -0.87
VPS13B-211ENST00000522802 CAMKK2Q96RR4 588 aa9.64□□□□□ -0.87
VPS13B-211ENST00000522802 NUDT12Q9BQG2 462 aa9.64□□□□□ -0.87
VPS13B-211ENST00000522802 STK26Q9P289 416 aa9.64□□□□□ -0.87
VPS13B-211ENST00000522802 MYOM1P52179 1685 aa9.64□□□□□ -0.87
VPS13B-211ENST00000522802 CASZ1Q86V15 1759 aa9.63□□□□□ -0.87
VPS13B-211ENST00000522802 MCM6Q14566 821 aa9.63□□□□□ -0.87
VPS13B-211ENST00000522802 MTMR14Q8NCE2 650 aa9.63□□□□□ -0.87
VPS13B-211ENST00000522802 HMX1Q9NP08 348 aaPredicted RBP9.63□□□□□ -0.87
VPS13B-211ENST00000522802 BTG4Q9NY30 223 aa9.63□□□□□ -0.87
VPS13B-211ENST00000522802 FCF1Q9Y324 198 aaKnown RBP9.63□□□□□ -0.87
VPS13B-211ENST00000522802 PHRF1Q9P1Y6 1649 aaKnown RBP9.63□□□□□ -0.87
VPS13B-211ENST00000522802 NINLQ9Y2I6 1382 aa9.63□□□□□ -0.87
VPS13B-211ENST00000522802 SPATA31A5Q5VU36 1347 aa9.62□□□□□ -0.87
VPS13B-211ENST00000522802 SPATA31A7Q8IWB4 1347 aa9.62□□□□□ -0.87
VPS13B-211ENST00000522802 ADGRF5Q8IZF2 1346 aa9.62□□□□□ -0.87
VPS13B-211ENST00000522802 TRIM37O94972 964 aa9.62□□□□□ -0.87
VPS13B-211ENST00000522802 PIK3C2GO75747 1445 aa9.62□□□□□ -0.87
VPS13B-211ENST00000522802 PARD3Q8TEW0 1356 aa9.62□□□□□ -0.87
VPS13B-211ENST00000522802 RPGRIP1LQ68CZ1 1315 aa9.61□□□□□ -0.87
VPS13B-211ENST00000522802 KCNH2Q12809 1159 aa9.61□□□□□ -0.87
VPS13B-211ENST00000522802 PTCRAQ6ISU1 281 aaPredicted RBP9.61□□□□□ -0.87
VPS13B-211ENST00000522802 YTHDC2Q9H6S0 1430 aaKnown RBP9.61□□□□□ -0.87
VPS13B-211ENST00000522802 ABCC11Q96J66 1382 aa9.61□□□□□ -0.87
VPS13B-211ENST00000522802 CCDC24Q8N4L8 307 aa9.6□□□□□ -0.87
VPS13B-211ENST00000522802 TRIM34Q9BYJ4 488 aa9.6□□□□□ -0.87
VPS13B-211ENST00000522802 MAP10Q9P2G4 905 aa9.6□□□□□ -0.87
VPS13B-211ENST00000522802 RGPD3A6NKT7 1758 aaPredicted RBP9.6□□□□□ -0.87
VPS13B-211ENST00000522802 RGPD4Q7Z3J3 1758 aa9.6□□□□□ -0.87
VPS13B-211ENST00000522802 SENP3-EIF4A1A0A087X0R7 540 aa9.59□□□□□ -0.87
VPS13B-211ENST00000522802 APBA3O96018 575 aa9.59□□□□□ -0.87
VPS13B-211ENST00000522802 PSME1Q06323 249 aa9.59□□□□□ -0.87
VPS13B-211ENST00000522802 NR6A1Q15406 480 aa9.59□□□□□ -0.87
VPS13B-211ENST00000522802 PLA2G2CQ5R387 149 aa9.59□□□□□ -0.87
VPS13B-211ENST00000522802 TMEM132EQ6IEE7 984 aa9.59□□□□□ -0.87
VPS13B-211ENST00000522802 ZNF784Q8NCA9 323 aaPredicted RBP9.59□□□□□ -0.87
VPS13B-211ENST00000522802 EPS8L1Q8TE68 723 aa9.59□□□□□ -0.87
VPS13B-211ENST00000522802 PPP1R1BQ9UD71 204 aaPredicted RBP9.59□□□□□ -0.87
VPS13B-211ENST00000522802 PDZRN3Q9UPQ7 1066 aa9.59□□□□□ -0.87
VPS13B-211ENST00000522802 SPATA31E1Q6ZUB1 1445 aa9.58□□□□□ -0.88
VPS13B-211ENST00000522802 CTHP32929 405 aa9.58□□□□□ -0.88
VPS13B-211ENST00000522802 ZNF787Q6DD87 383 aa9.58□□□□□ -0.88
VPS13B-211ENST00000522802 SPATA31A1Q5TZJ5 1347 aa9.57□□□□□ -0.88
VPS13B-211ENST00000522802 ANKARQ7Z5J8 1434 aa9.57□□□□□ -0.88
VPS13B-211ENST00000522802 PEAK1Q9H792 1746 aa9.57□□□□□ -0.88
VPS13B-211ENST00000522802 PMFBP1Q8TBY8 1022 aa9.57□□□□□ -0.88
VPS13B-211ENST00000522802 EMID1Q96A84 441 aaPredicted RBP9.57□□□□□ -0.88
VPS13B-211ENST00000522802 SPON1Q9HCB6 807 aa9.57□□□□□ -0.88
VPS13B-211ENST00000522802 GOLGB1Q14789 3259 aaKnown RBP9.57□□□□□ -0.88
VPS13B-211ENST00000522802 PARP4Q9UKK3 1724 aaKnown RBP9.56□□□□□ -0.88
VPS13B-211ENST00000522802 CHD4Q14839 1912 aa9.56□□□□□ -0.88
VPS13B-211ENST00000522802 KCNQ2O43526 872 aa9.56□□□□□ -0.88
VPS13B-211ENST00000522802 FAM196AQ6ZSG2 479 aa9.56□□□□□ -0.88
VPS13B-211ENST00000522802 SBF2Q86WG5 1849 aa9.56□□□□□ -0.88
VPS13B-211ENST00000522802 LMO7Q8WWI1 1683 aa9.55□□□□□ -0.88
VPS13B-211ENST00000522802 KIAA0232Q92628 1395 aa9.55□□□□□ -0.88
VPS13B-211ENST00000522802 APBB1O00213 710 aa9.55□□□□□ -0.88
VPS13B-211ENST00000522802 SAFB2Q14151 953 aaKnown RBP eCLIP9.55□□□□□ -0.88
VPS13B-211ENST00000522802 UNC93B1Q9H1C4 597 aa9.55□□□□□ -0.88
VPS13B-211ENST00000522802 LRRC37A3O60309 1634 aa9.55□□□□□ -0.88
VPS13B-211ENST00000522802 ANKRD30BQ9BXX2 1392 aa9.54□□□□□ -0.88
VPS13B-211ENST00000522802 RPIAP49247 311 aa9.54□□□□□ -0.88
VPS13B-211ENST00000522802 LIAT1Q6ZQX7 453 aa9.54□□□□□ -0.88
VPS13B-211ENST00000522802 PDGFDQ9GZP0 370 aaPredicted RBP9.54□□□□□ -0.88
VPS13B-211ENST00000522802 PRDM11Q9NQV5 511 aa9.54□□□□□ -0.88
VPS13B-211ENST00000522802 DLC1Q96QB1 1528 aa9.54□□□□□ -0.88
VPS13B-211ENST00000522802 TULP4Q9NRJ4 1543 aa9.54□□□□□ -0.88
VPS13B-211ENST00000522802 SSH2Q76I76 1423 aa9.54□□□□□ -0.88
VPS13B-211ENST00000522802 WNK3Q9BYP7 1800 aa9.54□□□□□ -0.88
VPS13B-211ENST00000522802 ACIN1Q9UKV3 1341 aaKnown RBP9.54□□□□□ -0.88
VPS13B-211ENST00000522802 CHRNA2Q15822 529 aa9.53□□□□□ -0.88
VPS13B-211ENST00000522802 NBPF8Q3BBV2 869 aa9.53□□□□□ -0.88
VPS13B-211ENST00000522802 NBPF14Q5TI25 921 aa9.53□□□□□ -0.88
VPS13B-211ENST00000522802 STRN4Q9NRL3 753 aa9.53□□□□□ -0.88
VPS13B-211ENST00000522802 FKBPLQ9UIM3 349 aa9.53□□□□□ -0.88
VPS13B-211ENST00000522802 ITSN1Q15811 1721 aa9.53□□□□□ -0.88
VPS13B-211ENST00000522802 PRR36Q9H6K5 1346 aa9.53□□□□□ -0.88
VPS13B-211ENST00000522802 ZBTB24O43167 697 aaPredicted RBP9.52□□□□□ -0.89
VPS13B-211ENST00000522802 GPR37L1O60883 481 aa9.52□□□□□ -0.89
VPS13B-211ENST00000522802 C1QTNF8P60827 252 aa9.52□□□□□ -0.89
VPS13B-211ENST00000522802 RGL3Q3MIN7 710 aa9.52□□□□□ -0.89
VPS13B-211ENST00000522802 ARMC2Q8NEN0 867 aa9.52□□□□□ -0.89
VPS13B-211ENST00000522802 PRAM1Q96QH2 718 aa9.52□□□□□ -0.89
VPS13B-211ENST00000522802 USP35Q9P2H5 1018 aa9.52□□□□□ -0.89
VPS13B-211ENST00000522802 COG6Q9Y2V7 657 aa9.52□□□□□ -0.89
VPS13B-211ENST00000522802 NDUFB9Q9Y6M9 179 aa9.52□□□□□ -0.89
VPS13B-211ENST00000522802 GPRASP1Q5JY77 1395 aa9.51□□□□□ -0.89
VPS13B-211ENST00000522802 ADGRB1O14514 1584 aa9.51□□□□□ -0.89
VPS13B-211ENST00000522802 SLC19A1P41440 591 aa9.51□□□□□ -0.89
VPS13B-211ENST00000522802 ZNF775Q96BV0 537 aaPredicted RBP9.51□□□□□ -0.89
VPS13B-211ENST00000522802 PRM3Q9NNZ6 103 aa9.51□□□□□ -0.89
VPS13B-211ENST00000522802 TBC1D2BQ9UPU7 963 aa9.51□□□□□ -0.89
VPS13B-211ENST00000522802 TOPAZ1Q8N9V7 1692 aa9.51□□□□□ -0.89
VPS13B-211ENST00000522802 CD2BP2O95400 341 aaKnown RBP9.5□□□□□ -0.89
VPS13B-211ENST00000522802 TRIM32Q13049 653 aa9.5□□□□□ -0.89
VPS13B-211ENST00000522802 BAP1Q92560 729 aa9.5□□□□□ -0.89
VPS13B-211ENST00000522802 POM121Q96HA1 1249 aa9.5□□□□□ -0.89
VPS13B-211ENST00000522802 SHANK3Q9BYB0 1731 aa9.5□□□□□ -0.89
VPS13B-211ENST00000522802 ZC3H4Q9UPT8 1303 aaKnown RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms