RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 YIPF2Q9BWQ6 316 aa9.68□□□□□ -0.86
HMGB4-204ENST00000522796 TMOD4Q9NZQ9 345 aa9.68□□□□□ -0.86
HMGB4-204ENST00000522796 MCM8Q9UJA3 840 aa9.68□□□□□ -0.86
HMGB4-204ENST00000522796 RABL2BQ9UNT1 228 aa9.68□□□□□ -0.86
HMGB4-204ENST00000522796 POLR3GO15318 223 aaPredicted RBP9.68□□□□□ -0.86
HMGB4-204ENST00000522796 BDNFP23560 247 aa9.68□□□□□ -0.86
HMGB4-204ENST00000522796 REXO1L1PQ8IX06 675 aa9.68□□□□□ -0.86
HMGB4-204ENST00000522796 AGBL1Q96MI9 1066 aa9.68□□□□□ -0.86
HMGB4-204ENST00000522796 SRRTQ9BXP5 876 aaKnown RBP9.68□□□□□ -0.86
HMGB4-204ENST00000522796 KCNF1Q9H3M0 494 aa9.68□□□□□ -0.86
HMGB4-204ENST00000522796 MKRN1Q9UHC7 482 aaKnown RBP9.68□□□□□ -0.86
HMGB4-204ENST00000522796 SHTN1A0MZ66 631 aa9.67□□□□□ -0.86
HMGB4-204ENST00000522796 KIF5CO60282 957 aa9.67□□□□□ -0.86
HMGB4-204ENST00000522796 AP1G2O75843 785 aa9.67□□□□□ -0.86
HMGB4-204ENST00000522796 PECAM1P16284 738 aaPredicted RBP9.67□□□□□ -0.86
HMGB4-204ENST00000522796 EIF5P55010 431 aaKnown RBP9.67□□□□□ -0.86
HMGB4-204ENST00000522796 KCNA1Q09470 495 aa9.67□□□□□ -0.86
HMGB4-204ENST00000522796 RTF1Q92541 710 aaKnown RBP9.67□□□□□ -0.86
HMGB4-204ENST00000522796 POLR3CQ9BUI4 534 aaPredicted RBP9.67□□□□□ -0.86
HMGB4-204ENST00000522796 FAM107BQ9H098 131 aa9.67□□□□□ -0.86
HMGB4-204ENST00000522796 YEATS2Q9ULM3 1422 aa9.67□□□□□ -0.86
HMGB4-204ENST00000522796 ARAP1Q96P48 1450 aa9.67□□□□□ -0.86
HMGB4-204ENST00000522796 ATAD2BQ9ULI0 1458 aa9.67□□□□□ -0.86
HMGB4-204ENST00000522796 TOP2AP11388 1531 aaKnown RBP9.67□□□□□ -0.86
HMGB4-204ENST00000522796 RTN2O75298 545 aa9.67□□□□□ -0.86
HMGB4-204ENST00000522796 FCHSD2O94868 740 aa9.67□□□□□ -0.86
HMGB4-204ENST00000522796 GOLGA2Q08379 1002 aa9.67□□□□□ -0.86
HMGB4-204ENST00000522796 ELF2Q15723 593 aa9.67□□□□□ -0.86
HMGB4-204ENST00000522796 ANKRD45Q5TZF3 282 aa9.67□□□□□ -0.86
HMGB4-204ENST00000522796 CCDC70Q6NSX1 233 aa9.67□□□□□ -0.86
HMGB4-204ENST00000522796 ZNF662Q6ZS27 426 aa9.67□□□□□ -0.86
HMGB4-204ENST00000522796 CTCFLQ8NI51 663 aaPredicted RBP9.67□□□□□ -0.86
HMGB4-204ENST00000522796 TAF4BQ92750 862 aa9.67□□□□□ -0.86
HMGB4-204ENST00000522796 SPATA31E1Q6ZUB1 1445 aa9.67□□□□□ -0.86
HMGB4-204ENST00000522796 RDXP35241 583 aaKnown RBP9.66□□□□□ -0.86
HMGB4-204ENST00000522796 MRPL12P52815 198 aaKnown RBP9.66□□□□□ -0.86
HMGB4-204ENST00000522796 IRF5Q13568 498 aa9.66□□□□□ -0.86
HMGB4-204ENST00000522796 ANKRD18AQ8IVF6 992 aa9.66□□□□□ -0.86
HMGB4-204ENST00000522796 SAMD3Q8N6K7 520 aa9.66□□□□□ -0.86
HMGB4-204ENST00000522796 PMFBP1Q8TBY8 1022 aa9.66□□□□□ -0.86
HMGB4-204ENST00000522796 TEKT1Q969V4 418 aa9.66□□□□□ -0.86
HMGB4-204ENST00000522796 CCDC34Q96HJ3 373 aa9.66□□□□□ -0.86
HMGB4-204ENST00000522796 USP25Q9UHP3 1055 aa9.66□□□□□ -0.86
HMGB4-204ENST00000522796 NRBP1Q9UHY1 535 aa9.66□□□□□ -0.86
HMGB4-204ENST00000522796 ZNF215Q9UL58 517 aaPredicted RBP9.66□□□□□ -0.86
HMGB4-204ENST00000522796 MYBBP1AQ9BQG0 1328 aaKnown RBP9.66□□□□□ -0.86
HMGB4-204ENST00000522796 UACAQ9BZF9 1416 aa9.66□□□□□ -0.86
HMGB4-204ENST00000522796 K7ELQ4 463 aaPredicted RBP9.66□□□□□ -0.86
HMGB4-204ENST00000522796 HNRNPH1P31943 449 aaKnown RBP9.66□□□□□ -0.86
HMGB4-204ENST00000522796 INF2Q27J81 1249 aa9.66□□□□□ -0.86
HMGB4-204ENST00000522796 HHATQ5VTY9 493 aa9.66□□□□□ -0.86
HMGB4-204ENST00000522796 LRRC31Q6UY01 552 aa9.66□□□□□ -0.86
HMGB4-204ENST00000522796 ARL10Q8N8L6 244 aa9.66□□□□□ -0.86
HMGB4-204ENST00000522796 RSPH1Q8WYR4 309 aa9.66□□□□□ -0.86
HMGB4-204ENST00000522796 N4BP2L2Q92802 583 aaPredicted RBP9.66□□□□□ -0.86
HMGB4-204ENST00000522796 EXOC6BQ9Y2D4 811 aa9.66□□□□□ -0.86
HMGB4-204ENST00000522796 THOC2Q8NI27 1593 aaKnown RBP9.66□□□□□ -0.86
HMGB4-204ENST00000522796 CYP2E1P05181 493 aaPredicted RBP9.65□□□□□ -0.86
HMGB4-204ENST00000522796 NBPF7P0C2Y1 421 aaPredicted RBP9.65□□□□□ -0.86
HMGB4-204ENST00000522796 XBP1P17861 261 aa9.65□□□□□ -0.86
HMGB4-204ENST00000522796 SYAP1Q96A49 352 aaPredicted RBP9.65□□□□□ -0.86
HMGB4-204ENST00000522796 PLEKHG4BQ96PX9 1271 aa9.65□□□□□ -0.86
HMGB4-204ENST00000522796 THRAP3Q9Y2W1 955 aaKnown RBP9.65□□□□□ -0.86
HMGB4-204ENST00000522796 BLMP54132 1417 aaPredicted RBP9.65□□□□□ -0.86
HMGB4-204ENST00000522796 CCDC175P0C221 793 aa9.65□□□□□ -0.86
HMGB4-204ENST00000522796 NF2P35240 595 aa9.65□□□□□ -0.86
HMGB4-204ENST00000522796 ABL2P42684 1182 aa9.65□□□□□ -0.86
HMGB4-204ENST00000522796 ZNF394Q53GI3 561 aa9.65□□□□□ -0.86
HMGB4-204ENST00000522796 PDRG1Q9NUG6 133 aa9.65□□□□□ -0.86
HMGB4-204ENST00000522796 KIF21AQ7Z4S6 1674 aa9.65□□□□□ -0.87
HMGB4-204ENST00000522796 KIF27Q86VH2 1401 aa9.65□□□□□ -0.87
HMGB4-204ENST00000522796 GPTP24298 496 aa9.64□□□□□ -0.87
HMGB4-204ENST00000522796 LMAN1P49257 510 aa9.64□□□□□ -0.87
HMGB4-204ENST00000522796 SLC7A5Q01650 507 aa9.64□□□□□ -0.87
HMGB4-204ENST00000522796 DDR1Q08345 913 aa9.64□□□□□ -0.87
HMGB4-204ENST00000522796 NBPF8Q3BBV2 869 aa9.64□□□□□ -0.87
HMGB4-204ENST00000522796 KLHL10Q6JEL2 608 aa9.64□□□□□ -0.87
HMGB4-204ENST00000522796 CPLX2Q6PUV4 134 aaKnown RBP9.64□□□□□ -0.87
HMGB4-204ENST00000522796 STAG2Q8N3U4 1231 aa9.64□□□□□ -0.87
HMGB4-204ENST00000522796 C16orf45Q96MC5 204 aaPredicted RBP9.64□□□□□ -0.87
HMGB4-204ENST00000522796 CLIP2Q9UDT6 1046 aa9.64□□□□□ -0.87
HMGB4-204ENST00000522796 AKAP2Q9Y2D5 859 aa9.64□□□□□ -0.87
HMGB4-204ENST00000522796 KAT6BQ8WYB5 2073 aa9.64□□□□□ -0.87
HMGB4-204ENST00000522796 EME2A4GXA9 379 aaPredicted RBP9.64□□□□□ -0.87
HMGB4-204ENST00000522796 OAS2P29728 719 aaKnown RBP9.64□□□□□ -0.87
HMGB4-204ENST00000522796 CLCN6P51797 869 aa9.64□□□□□ -0.87
HMGB4-204ENST00000522796 BICD1Q96G01 975 aa9.64□□□□□ -0.87
HMGB4-204ENST00000522796 FAM163AQ96GL9 167 aaPredicted RBP9.64□□□□□ -0.87
HMGB4-204ENST00000522796 LMCD1Q9NZU5 365 aa9.64□□□□□ -0.87
HMGB4-204ENST00000522796 ZSCAN9O15535 394 aaPredicted RBP9.63□□□□□ -0.87
HMGB4-204ENST00000522796 PRPF40AO75400 957 aaKnown RBP9.63□□□□□ -0.87
HMGB4-204ENST00000522796 MECOMQ03112 1051 aa9.63□□□□□ -0.87
HMGB4-204ENST00000522796 ARGLU1Q9NWB6 273 aaPredicted RBP9.63□□□□□ -0.87
HMGB4-204ENST00000522796 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.63□□□□□ -0.87
HMGB4-204ENST00000522796 SLU7O95391 586 aaKnown RBP9.63□□□□□ -0.87
HMGB4-204ENST00000522796 RAB27AP51159 221 aa9.63□□□□□ -0.87
HMGB4-204ENST00000522796 SCRN1Q12765 414 aa9.63□□□□□ -0.87
HMGB4-204ENST00000522796 ARMC3Q5W041 872 aa9.63□□□□□ -0.87
HMGB4-204ENST00000522796 WDR63Q8IWG1 891 aa9.63□□□□□ -0.87
HMGB4-204ENST00000522796 AMOTL1Q8IY63 956 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms