RNA–Protein interactions for RNA: ENST00000522466.1

PDGFRB-210, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 296 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-210ENST00000522466 BRIP1Q9BX63 1249 aa10.98□□□□□ -0.65
PDGFRB-210ENST00000522466 TSKSQ9UJT2 592 aa10.98□□□□□ -0.65
PDGFRB-210ENST00000522466 ABT1Q9ULW3 272 aaKnown RBP10.98□□□□□ -0.65
PDGFRB-210ENST00000522466 ZNF541Q9H0D2 1346 aa10.98□□□□□ -0.65
PDGFRB-210ENST00000522466 FMR1Q06787 632 aaKnown RBP eCLIP10.97□□□□□ -0.65
PDGFRB-210ENST00000522466 ZNF277Q9NRM2 450 aaPredicted RBP10.97□□□□□ -0.65
PDGFRB-210ENST00000522466 WDR33Q9C0J8 1336 aaKnown RBP10.97□□□□□ -0.65
PDGFRB-210ENST00000522466 LTBP3Q9NS15 1303 aa10.97□□□□□ -0.65
PDGFRB-210ENST00000522466 RNF123Q5XPI4 1314 aa10.96□□□□□ -0.65
PDGFRB-210ENST00000522466 HMOX1P09601 288 aa10.96□□□□□ -0.65
PDGFRB-210ENST00000522466 EPHX2P34913 555 aa10.96□□□□□ -0.65
PDGFRB-210ENST00000522466 OLFM4Q6UX06 510 aa10.96□□□□□ -0.65
PDGFRB-210ENST00000522466 CNTROBQ8N137 903 aa10.96□□□□□ -0.65
PDGFRB-210ENST00000522466 CNKSR1Q969H4 720 aa10.96□□□□□ -0.65
PDGFRB-210ENST00000522466 HACL1Q9UJ83 578 aa10.96□□□□□ -0.65
PDGFRB-210ENST00000522466 A0A087WZG4 1122 aa10.95□□□□□ -0.66
PDGFRB-210ENST00000522466 RASSF10A6NK89 507 aa10.95□□□□□ -0.66
PDGFRB-210ENST00000522466 EIF5P55010 431 aaKnown RBP10.95□□□□□ -0.66
PDGFRB-210ENST00000522466 MAP2K1Q02750 393 aaPredicted RBP10.95□□□□□ -0.66
PDGFRB-210ENST00000522466 MORC1Q86VD1 984 aa10.95□□□□□ -0.66
PDGFRB-210ENST00000522466 CNBD1Q8NA66 436 aa10.95□□□□□ -0.66
PDGFRB-210ENST00000522466 L3MBTL3Q96JM7 780 aaPredicted RBP10.95□□□□□ -0.66
PDGFRB-210ENST00000522466 ARFGEF2Q9Y6D5 1785 aa10.95□□□□□ -0.66
PDGFRB-210ENST00000522466 SCN7AQ01118 1682 aa10.95□□□□□ -0.66
PDGFRB-210ENST00000522466 CASP8AP2Q9UKL3 1982 aa10.94□□□□□ -0.66
PDGFRB-210ENST00000522466 STARD3NLO95772 234 aa10.94□□□□□ -0.66
PDGFRB-210ENST00000522466 SRGNP10124 158 aa10.94□□□□□ -0.66
PDGFRB-210ENST00000522466 IL13P35225 146 aa10.94□□□□□ -0.66
PDGFRB-210ENST00000522466 ST5P78524 1137 aa10.94□□□□□ -0.66
PDGFRB-210ENST00000522466 STYK1Q6J9G0 422 aa10.94□□□□□ -0.66
PDGFRB-210ENST00000522466 CYP4F22Q6NT55 531 aa10.94□□□□□ -0.66
PDGFRB-210ENST00000522466 MASTLQ96GX5 879 aa10.94□□□□□ -0.66
PDGFRB-210ENST00000522466 PANK3Q9H999 370 aa10.94□□□□□ -0.66
PDGFRB-210ENST00000522466 PDZRN3Q9UPQ7 1066 aa10.94□□□□□ -0.66
PDGFRB-210ENST00000522466 MRC1P22897 1456 aa10.93□□□□□ -0.66
PDGFRB-210ENST00000522466 UBR2Q8IWV8 1755 aa10.93□□□□□ -0.66
PDGFRB-210ENST00000522466 ADAMTSL1Q8N6G6 1762 aa10.93□□□□□ -0.66
PDGFRB-210ENST00000522466 ABCB7O75027 752 aa10.93□□□□□ -0.66
PDGFRB-210ENST00000522466 PIP4K2AP48426 406 aaPredicted RBP10.93□□□□□ -0.66
PDGFRB-210ENST00000522466 CCDC93Q567U6 631 aa10.93□□□□□ -0.66
PDGFRB-210ENST00000522466 TTC5Q8N0Z6 440 aa10.93□□□□□ -0.66
PDGFRB-210ENST00000522466 SETDB2Q96T68 719 aa10.93□□□□□ -0.66
PDGFRB-210ENST00000522466 FAM177BA6PVY3 158 aa10.92□□□□□ -0.66
PDGFRB-210ENST00000522466 AOC2O75106 756 aa10.92□□□□□ -0.66
PDGFRB-210ENST00000522466 A1BGP04217 495 aa10.92□□□□□ -0.66
PDGFRB-210ENST00000522466 FKBP4Q02790 459 aaKnown RBP eCLIP10.92□□□□□ -0.66
PDGFRB-210ENST00000522466 MTHFSDQ2M296 383 aaKnown RBP10.92□□□□□ -0.66
PDGFRB-210ENST00000522466 SOGA3Q5TF21 947 aa10.92□□□□□ -0.66
PDGFRB-210ENST00000522466 VSIG10Q8N0Z9 540 aa10.92□□□□□ -0.66
PDGFRB-210ENST00000522466 ZNF496Q96IT1 587 aaPredicted RBP10.92□□□□□ -0.66
PDGFRB-210ENST00000522466 CAPNS2Q96L46 248 aa10.92□□□□□ -0.66
PDGFRB-210ENST00000522466 BEGAINQ9BUH8 593 aa10.92□□□□□ -0.66
PDGFRB-210ENST00000522466 GJA3Q9Y6H8 435 aa10.92□□□□□ -0.66
PDGFRB-210ENST00000522466 CAMTA2O94983 1202 aa10.91□□□□□ -0.66
PDGFRB-210ENST00000522466 SYNE4Q8N205 404 aa10.91□□□□□ -0.66
PDGFRB-210ENST00000522466 C7orf43Q8WVR3 580 aa10.91□□□□□ -0.66
PDGFRB-210ENST00000522466 GPR101Q96P66 508 aaPredicted RBP10.91□□□□□ -0.66
PDGFRB-210ENST00000522466 DDX21Q9NR30 783 aaKnown RBP eCLIP10.91□□□□□ -0.66
PDGFRB-210ENST00000522466 PCDH10Q9P2E7 1040 aa10.91□□□□□ -0.66
PDGFRB-210ENST00000522466 TRPM7Q96QT4 1865 aa10.91□□□□□ -0.66
PDGFRB-210ENST00000522466 TRAF5O00463 557 aa10.9□□□□□ -0.66
PDGFRB-210ENST00000522466 RGS19P49795 217 aa10.9□□□□□ -0.66
PDGFRB-210ENST00000522466 NPM2Q86SE8 214 aaKnown RBP10.9□□□□□ -0.66
PDGFRB-210ENST00000522466 PNMA8AQ86V59 439 aaPredicted RBP10.9□□□□□ -0.66
PDGFRB-210ENST00000522466 NBPF5PQ86XG9 351 aaPredicted RBP10.9□□□□□ -0.66
PDGFRB-210ENST00000522466 MCOLN1Q9GZU1 580 aa10.9□□□□□ -0.66
PDGFRB-210ENST00000522466 BCORQ6W2J9 1755 aa10.9□□□□□ -0.67
PDGFRB-210ENST00000522466 HEG1Q9ULI3 1381 aa10.9□□□□□ -0.67
PDGFRB-210ENST00000522466 NPR1P16066 1061 aa10.89□□□□□ -0.67
PDGFRB-210ENST00000522466 IL6STP40189 918 aaPredicted RBP10.89□□□□□ -0.67
PDGFRB-210ENST00000522466 IARSP41252 1262 aaKnown RBP10.89□□□□□ -0.67
PDGFRB-210ENST00000522466 DZIP3Q86Y13 1208 aaKnown RBP10.89□□□□□ -0.67
PDGFRB-210ENST00000522466 LTBP1Q14766 1721 aa10.89□□□□□ -0.67
PDGFRB-210ENST00000522466 KCNQ3O43525 872 aa10.88□□□□□ -0.67
PDGFRB-210ENST00000522466 ECE1P42892 770 aa10.88□□□□□ -0.67
PDGFRB-210ENST00000522466 THSD7BQ9C0I4 1608 aa10.87□□□□□ -0.67
PDGFRB-210ENST00000522466 FZD9O00144 591 aa10.87□□□□□ -0.67
PDGFRB-210ENST00000522466 EPS15P42566 896 aa10.87□□□□□ -0.67
PDGFRB-210ENST00000522466 TEFQ10587 303 aa10.87□□□□□ -0.67
PDGFRB-210ENST00000522466 DGKZQ13574 1117 aa10.87□□□□□ -0.67
PDGFRB-210ENST00000522466 CST9Q5W186 159 aa10.87□□□□□ -0.67
PDGFRB-210ENST00000522466 ZNF790Q6PG37 636 aa10.87□□□□□ -0.67
PDGFRB-210ENST00000522466 SLC51AQ86UW1 340 aa10.87□□□□□ -0.67
PDGFRB-210ENST00000522466 GPC2Q8N158 579 aa10.87□□□□□ -0.67
PDGFRB-210ENST00000522466 COL4A5P29400 1685 aa10.86□□□□□ -0.67
PDGFRB-210ENST00000522466 PRAMEF22A3QJZ6 481 aa10.86□□□□□ -0.67
PDGFRB-210ENST00000522466 TCERG1O14776 1098 aaKnown RBP10.86□□□□□ -0.67
PDGFRB-210ENST00000522466 LMOD1P29536 600 aaPredicted RBP10.86□□□□□ -0.67
PDGFRB-210ENST00000522466 EIF6P56537 245 aaKnown RBP10.86□□□□□ -0.67
PDGFRB-210ENST00000522466 RTKN2Q8IZC4 609 aa10.86□□□□□ -0.67
PDGFRB-210ENST00000522466 IL17REQ8NFR9 667 aa10.86□□□□□ -0.67
PDGFRB-210ENST00000522466 JDP2Q8WYK2 163 aa10.86□□□□□ -0.67
PDGFRB-210ENST00000522466 TEX13AQ9BXU3 409 aaPredicted RBP10.86□□□□□ -0.67
PDGFRB-210ENST00000522466 SIPA1L3O60292 1781 aaPredicted RBP10.85□□□□□ -0.67
PDGFRB-210ENST00000522466 CNGB1Q14028 1251 aaPredicted RBP10.85□□□□□ -0.67
PDGFRB-210ENST00000522466 FMNL2Q96PY5 1086 aa10.85□□□□□ -0.67
PDGFRB-210ENST00000522466 NIP7Q9Y221 180 aaKnown RBP eCLIP10.85□□□□□ -0.67
PDGFRB-210ENST00000522466 USP16Q9Y5T5 823 aa10.85□□□□□ -0.67
PDGFRB-210ENST00000522466 TLL2Q9Y6L7 1015 aa10.85□□□□□ -0.67
PDGFRB-210ENST00000522466 CELF2O95319 508 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms