RNA–Protein interactions for RNA: ENST00000522456.1

HOXA3-205, Transcript of homeobox A3, humanhuman

TSL 4

Gene HOXA3, Length 503 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-205ENST00000522456 CARMIL3Q8ND23 1372 aa28.53■■■□□ 2.16
HOXA3-205ENST00000522456 LAMB4A4D0S4 1761 aa28.52■■■□□ 2.16
HOXA3-205ENST00000522456 TNRC6CQ9HCJ0 1690 aaKnown RBP28.52■■■□□ 2.16
HOXA3-205ENST00000522456 RASSF7Q02833 373 aa28.52■■■□□ 2.16
HOXA3-205ENST00000522456 BICDL1Q6ZP65 573 aa28.52■■■□□ 2.16
HOXA3-205ENST00000522456 CFAP44Q96MT7 982 aa28.52■■■□□ 2.16
HOXA3-205ENST00000522456 PIP4K2AP48426 406 aaPredicted RBP28.51■■■□□ 2.15
HOXA3-205ENST00000522456 C2CD5Q86YS7 1000 aa28.51■■■□□ 2.15
HOXA3-205ENST00000522456 TTLL6Q8N841 843 aa28.5■■■□□ 2.15
HOXA3-205ENST00000522456 ZC3H4Q9UPT8 1303 aaKnown RBP28.49■■■□□ 2.15
HOXA3-205ENST00000522456 H0YIN7 160 aa28.49■■■□□ 2.15
HOXA3-205ENST00000522456 CCER2I3L3R5 266 aa28.49■■■□□ 2.15
HOXA3-205ENST00000522456 CCDC27Q2M243 656 aa28.49■■■□□ 2.15
HOXA3-205ENST00000522456 SALL2Q9Y467 1007 aaPredicted RBP28.49■■■□□ 2.15
HOXA3-205ENST00000522456 GNAI1P63096 354 aa28.48■■■□□ 2.15
HOXA3-205ENST00000522456 TBC1D9BQ66K14 1250 aa28.48■■■□□ 2.15
HOXA3-205ENST00000522456 WDR90Q96KV7 1748 aa28.47■■■□□ 2.15
HOXA3-205ENST00000522456 LMNB1P20700 586 aa28.47■■■□□ 2.15
HOXA3-205ENST00000522456 WWC1Q8IX03 1113 aa28.47■■■□□ 2.15
HOXA3-205ENST00000522456 RRAGCQ9HB90 399 aa28.47■■■□□ 2.15
HOXA3-205ENST00000522456 IFT57Q9NWB7 429 aa28.47■■■□□ 2.15
HOXA3-205ENST00000522456 TBC1D2BQ9UPU7 963 aa28.47■■■□□ 2.15
HOXA3-205ENST00000522456 NBPF26B4DH59 902 aa28.46■■■□□ 2.15
HOXA3-205ENST00000522456 FSTL1Q12841 308 aa28.46■■■□□ 2.15
HOXA3-205ENST00000522456 NCBP3Q53F19 620 aaKnown RBP28.46■■■□□ 2.15
HOXA3-205ENST00000522456 NBPF10Q6P3W6 841 aaKnown RBP28.46■■■□□ 2.15
HOXA3-205ENST00000522456 NBPF15Q8N660 670 aa28.46■■■□□ 2.15
HOXA3-205ENST00000522456 MBIPQ9NS73 344 aa28.46■■■□□ 2.15
HOXA3-205ENST00000522456 ANKRD31Q8N7Z5 1873 aa28.45■■■□□ 2.15
HOXA3-205ENST00000522456 ZNF853P0CG23 659 aa28.45■■■□□ 2.14
HOXA3-205ENST00000522456 DNAJC5GQ8N7S2 189 aa28.45■■■□□ 2.14
HOXA3-205ENST00000522456 EIF2S2P20042 333 aaKnown RBP28.44■■■□□ 2.14
HOXA3-205ENST00000522456 TIAM2Q8IVF5 1701 aa28.43■■■□□ 2.14
HOXA3-205ENST00000522456 BCORQ6W2J9 1755 aa28.43■■■□□ 2.14
HOXA3-205ENST00000522456 PRELPP51888 382 aa28.43■■■□□ 2.14
HOXA3-205ENST00000522456 KRT24Q2M2I5 525 aa28.43■■■□□ 2.14
HOXA3-205ENST00000522456 DZIP3Q86Y13 1208 aaKnown RBP28.43■■■□□ 2.14
HOXA3-205ENST00000522456 PRR5LQ6MZQ0 368 aa28.42■■■□□ 2.14
HOXA3-205ENST00000522456 BRIP1Q9BX63 1249 aa28.42■■■□□ 2.14
HOXA3-205ENST00000522456 PDZRN3Q9UPQ7 1066 aa28.42■■■□□ 2.14
HOXA3-205ENST00000522456 COL11A2P13942 1736 aaPredicted RBP28.42■■■□□ 2.14
HOXA3-205ENST00000522456 NFKBIEO00221 500 aa28.41■■■□□ 2.14
HOXA3-205ENST00000522456 MYL6BP14649 208 aa28.41■■■□□ 2.14
HOXA3-205ENST00000522456 PDE6BP35913 854 aa28.41■■■□□ 2.14
HOXA3-205ENST00000522456 MIER1Q8N108 512 aa28.41■■■□□ 2.14
HOXA3-205ENST00000522456 NGEFQ8N5V2 710 aa28.41■■■□□ 2.14
HOXA3-205ENST00000522456 CAMTA2O94983 1202 aa28.4■■■□□ 2.14
HOXA3-205ENST00000522456 ZNF622Q969S3 477 aaKnown RBP eCLIP28.4■■■□□ 2.14
HOXA3-205ENST00000522456 CCDC24Q8N4L8 307 aa28.39■■■□□ 2.14
HOXA3-205ENST00000522456 NECTIN2Q92692 538 aa28.39■■■□□ 2.14
HOXA3-205ENST00000522456 ZNF652Q9Y2D9 606 aa28.39■■■□□ 2.14
HOXA3-205ENST00000522456 GLTPD2A6NH11 291 aa28.38■■■□□ 2.13
HOXA3-205ENST00000522456 RGL2O15211 777 aa28.38■■■□□ 2.13
HOXA3-205ENST00000522456 CNBD1Q8NA66 436 aa28.38■■■□□ 2.13
HOXA3-205ENST00000522456 SETDB2Q96T68 719 aa28.38■■■□□ 2.13
HOXA3-205ENST00000522456 ERBB4Q15303 1308 aa28.38■■■□□ 2.13
HOXA3-205ENST00000522456 SMC1BQ8NDV3 1235 aa28.37■■■□□ 2.13
HOXA3-205ENST00000522456 CCDC88AQ3V6T2 1871 aa28.36■■■□□ 2.13
HOXA3-205ENST00000522456 NPHP1O15259 732 aa28.36■■■□□ 2.13
HOXA3-205ENST00000522456 HTRA3P83110 453 aa28.36■■■□□ 2.13
HOXA3-205ENST00000522456 DUSP27Q5VZP5 1158 aa28.36■■■□□ 2.13
HOXA3-205ENST00000522456 CLEC4GQ6UXB4 293 aa28.36■■■□□ 2.13
HOXA3-205ENST00000522456 IL16Q14005 1332 aa28.36■■■□□ 2.13
HOXA3-205ENST00000522456 C21orf2O43822 256 aa28.35■■■□□ 2.13
HOXA3-205ENST00000522456 WDR63Q8IWG1 891 aa28.35■■■□□ 2.13
HOXA3-205ENST00000522456 ELL2O00472 640 aaPredicted RBP28.34■■■□□ 2.13
HOXA3-205ENST00000522456 HOXB7P09629 217 aa28.34■■■□□ 2.13
HOXA3-205ENST00000522456 VEGFAP15692 232 aaPredicted RBP28.34■■■□□ 2.13
HOXA3-205ENST00000522456 ST5P78524 1137 aa28.34■■■□□ 2.13
HOXA3-205ENST00000522456 TSR2Q969E8 191 aaKnown RBP28.34■■■□□ 2.13
HOXA3-205ENST00000522456 ZNF219Q9P2Y4 722 aaPredicted RBP28.34■■■□□ 2.13
HOXA3-205ENST00000522456 HDGFL1Q5TGJ6 251 aa28.33■■■□□ 2.13
HOXA3-205ENST00000522456 KLRG1Q96E93 195 aa28.33■■■□□ 2.13
HOXA3-205ENST00000522456 FER1L6Q2WGJ9 1857 aa28.32■■■□□ 2.12
HOXA3-205ENST00000522456 PDIA6Q15084 440 aa28.32■■■□□ 2.12
HOXA3-205ENST00000522456 KIF6Q6ZMV9 814 aa28.31■■■□□ 2.12
HOXA3-205ENST00000522456 C8orf58Q8NAV2 365 aa28.31■■■□□ 2.12
HOXA3-205ENST00000522456 ANXA1P04083 346 aa28.3■■■□□ 2.12
HOXA3-205ENST00000522456 PROSER3Q2NL68 480 aa28.3■■■□□ 2.12
HOXA3-205ENST00000522456 STYK1Q6J9G0 422 aa28.3■■■□□ 2.12
HOXA3-205ENST00000522456 TTLL7Q6ZT98 887 aa28.3■■■□□ 2.12
HOXA3-205ENST00000522456 CNKSR1Q969H4 720 aa28.3■■■□□ 2.12
HOXA3-205ENST00000522456 SRGNP10124 158 aa28.29■■■□□ 2.12
HOXA3-205ENST00000522456 DDX21Q9NR30 783 aaKnown RBP eCLIP28.29■■■□□ 2.12
HOXA3-205ENST00000522456 ARFGEF2Q9Y6D5 1785 aa28.29■■■□□ 2.12
HOXA3-205ENST00000522456 DICER1Q9UPY3 1922 aaKnown RBP28.28■■■□□ 2.12
HOXA3-205ENST00000522456 CACNA1SQ13698 1873 aa28.28■■■□□ 2.12
HOXA3-205ENST00000522456 LTBP3Q9NS15 1303 aa28.28■■■□□ 2.12
HOXA3-205ENST00000522456 ERFEQ4G0M1 354 aa28.28■■■□□ 2.12
HOXA3-205ENST00000522456 DPY19L2Q6NUT2 758 aa28.28■■■□□ 2.12
HOXA3-205ENST00000522456 PRPF40BQ6NWY9 871 aaKnown RBP28.28■■■□□ 2.12
HOXA3-205ENST00000522456 TAOK3Q9H2K8 898 aa28.28■■■□□ 2.12
HOXA3-205ENST00000522456 CHPF2Q9P2E5 772 aa28.28■■■□□ 2.12
HOXA3-205ENST00000522456 MAP3K15Q6ZN16 1313 aa28.27■■■□□ 2.12
HOXA3-205ENST00000522456 HLFQ16534 295 aa28.27■■■□□ 2.12
HOXA3-205ENST00000522456 NBPF5PQ86XG9 351 aaPredicted RBP28.27■■■□□ 2.12
HOXA3-205ENST00000522456 MASTLQ96GX5 879 aa28.27■■■□□ 2.12
HOXA3-205ENST00000522456 DBF4Q9UBU7 674 aaPredicted RBP28.27■■■□□ 2.12
HOXA3-205ENST00000522456 SLX4Q8IY92 1834 aa28.27■■■□□ 2.12
HOXA3-205ENST00000522456 ERVV-1B6SEH8 477 aa28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms