RNA–Protein interactions for RNA: ENST00000522409.1

ZFHX4-208, Transcript of zinc finger homeobox 4, human

TSL 3

Gene ZFHX4, Length 623 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZFHX4-208	ENST00000522409	NKX2-3	Q8TAU0	364 aa		10.9	□□□□□ -0.66
ZFHX4-208	ENST00000522409	GTF3C2	Q8WUA4	911 aa	Predicted RBP	10.9	□□□□□ -0.66
ZFHX4-208	ENST00000522409	ANO2	Q9NQ90	1003 aa		10.9	□□□□□ -0.66
ZFHX4-208	ENST00000522409	SEPT3	Q9UH03	358 aa		10.9	□□□□□ -0.66
ZFHX4-208	ENST00000522409	CDK11A	Q9UQ88	783 aa	Predicted RBP	10.9	□□□□□ -0.66
ZFHX4-208	ENST00000522409	TNR	Q92752	1358 aa		10.9	□□□□□ -0.67
ZFHX4-208	ENST00000522409	ROBO1	Q9Y6N7	1651 aa		10.89	□□□□□ -0.67
ZFHX4-208	ENST00000522409	LOC105371045	A0A1W2PR82	267 aa		10.89	□□□□□ -0.67
ZFHX4-208	ENST00000522409	TSEN2	Q8NCE0	465 aa	Known RBP	10.89	□□□□□ -0.67
ZFHX4-208	ENST00000522409	JCAD	Q9P266	1359 aa		10.89	□□□□□ -0.67
ZFHX4-208	ENST00000522409	FAM135A	Q9P2D6	1515 aa		10.89	□□□□□ -0.67
ZFHX4-208	ENST00000522409		H3BRB1	525 aa		10.88	□□□□□ -0.67
ZFHX4-208	ENST00000522409	KCTD15	Q96SI1	283 aa	Predicted RBP	10.88	□□□□□ -0.67
ZFHX4-208	ENST00000522409	TUT1	Q9H6E5	874 aa	Known RBP	10.88	□□□□□ -0.67
ZFHX4-208	ENST00000522409	CDK12	Q9NYV4	1490 aa	Predicted RBP	10.87	□□□□□ -0.67
ZFHX4-208	ENST00000522409	CDC42BPB	Q9Y5S2	1711 aa		10.87	□□□□□ -0.67
ZFHX4-208	ENST00000522409	C21orf2	O43822	256 aa		10.87	□□□□□ -0.67
ZFHX4-208	ENST00000522409	FKBP4	Q02790	459 aa	Known RBP eCLIP	10.87	□□□□□ -0.67
ZFHX4-208	ENST00000522409	CAPN12	Q6ZSI9	719 aa		10.87	□□□□□ -0.67
ZFHX4-208	ENST00000522409	GLYCTK	Q8IVS8	523 aa		10.87	□□□□□ -0.67
ZFHX4-208	ENST00000522409	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	10.87	□□□□□ -0.67
ZFHX4-208	ENST00000522409	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	10.87	□□□□□ -0.67
ZFHX4-208	ENST00000522409	UGGT1	Q9NYU2	1555 aa		10.86	□□□□□ -0.67
ZFHX4-208	ENST00000522409	SETBP1	Q9Y6X0	1596 aa		10.86	□□□□□ -0.67
ZFHX4-208	ENST00000522409	FKBP5	Q13451	457 aa	Predicted RBP	10.86	□□□□□ -0.67
ZFHX4-208	ENST00000522409	GIPC2	Q8TF65	315 aa		10.86	□□□□□ -0.67
ZFHX4-208	ENST00000522409	PHLPP1	O60346	1717 aa		10.86	□□□□□ -0.67
ZFHX4-208	ENST00000522409	XIRP1	Q702N8	1843 aa	Known RBP	10.86	□□□□□ -0.67
ZFHX4-208	ENST00000522409	CLIP1	P30622	1438 aa		10.85	□□□□□ -0.67
ZFHX4-208	ENST00000522409	PTCD1	O75127	700 aa	Known RBP	10.85	□□□□□ -0.67
ZFHX4-208	ENST00000522409	MYC	P01106	439 aa	Predicted RBP	10.85	□□□□□ -0.67
ZFHX4-208	ENST00000522409	SCTR	P47872	440 aa		10.85	□□□□□ -0.67
ZFHX4-208	ENST00000522409	SF3B2	Q13435	895 aa	Known RBP	10.85	□□□□□ -0.67
ZFHX4-208	ENST00000522409	COL26A1	Q96A83	441 aa		10.85	□□□□□ -0.67
ZFHX4-208	ENST00000522409	PURB	Q96QR8	312 aa	Known RBP	10.85	□□□□□ -0.67
ZFHX4-208	ENST00000522409	MKNK1	Q9BUB5	465 aa		10.85	□□□□□ -0.67
ZFHX4-208	ENST00000522409	SPAG9	O60271	1321 aa	Known RBP	10.84	□□□□□ -0.67
ZFHX4-208	ENST00000522409	ARHGAP4	P98171	946 aa		10.84	□□□□□ -0.67
ZFHX4-208	ENST00000522409	ZNF358	Q9NW07	568 aa		10.84	□□□□□ -0.67
ZFHX4-208	ENST00000522409	SAMD9L	Q8IVG5	1584 aa		10.84	□□□□□ -0.67
ZFHX4-208	ENST00000522409	A2M	P01023	1474 aa		10.83	□□□□□ -0.68
ZFHX4-208	ENST00000522409	TMEM229A	B2RXF0	380 aa		10.83	□□□□□ -0.68
ZFHX4-208	ENST00000522409	ERVH48-1	M5A8F1	160 aa		10.83	□□□□□ -0.68
ZFHX4-208	ENST00000522409	RAB15	P59190	212 aa		10.83	□□□□□ -0.68
ZFHX4-208	ENST00000522409	FBXO33	Q7Z6M2	555 aa		10.83	□□□□□ -0.68
ZFHX4-208	ENST00000522409	ASB16	Q96NS5	453 aa		10.83	□□□□□ -0.68
ZFHX4-208	ENST00000522409	DCTN4	Q9UJW0	460 aa		10.83	□□□□□ -0.68
ZFHX4-208	ENST00000522409	MAP4K5	Q9Y4K4	846 aa		10.83	□□□□□ -0.68
ZFHX4-208	ENST00000522409	KDM5D	Q9BY66	1539 aa		10.83	□□□□□ -0.68
ZFHX4-208	ENST00000522409	SPATA31A6	Q5VVP1	1343 aa		10.83	□□□□□ -0.68
ZFHX4-208	ENST00000522409	PLXNC1	O60486	1568 aa		10.82	□□□□□ -0.68
ZFHX4-208	ENST00000522409	LRRC9	Q6ZRR7	1453 aa		10.82	□□□□□ -0.68
ZFHX4-208	ENST00000522409	NLRP1	Q9C000	1473 aa		10.82	□□□□□ -0.68
ZFHX4-208	ENST00000522409	VARS	P26640	1264 aa	Known RBP	10.82	□□□□□ -0.68
ZFHX4-208	ENST00000522409	ERVK-9	P63128	1117 aa		10.82	□□□□□ -0.68
ZFHX4-208	ENST00000522409	ZNF326	Q5BKZ1	582 aa	Known RBP	10.82	□□□□□ -0.68
ZFHX4-208	ENST00000522409	INTS6L	Q5JSJ4	861 aa	Known RBP	10.82	□□□□□ -0.68
ZFHX4-208	ENST00000522409	GAS2L2	Q8NHY3	880 aa		10.82	□□□□□ -0.68
ZFHX4-208	ENST00000522409	LRP6	O75581	1613 aa		10.82	□□□□□ -0.68
ZFHX4-208	ENST00000522409	PREX2	Q70Z35	1606 aa		10.82	□□□□□ -0.68
ZFHX4-208	ENST00000522409	TRO	Q12816	1431 aa	Predicted RBP	10.82	□□□□□ -0.68
ZFHX4-208	ENST00000522409	IGFBP4	P22692	258 aa		10.81	□□□□□ -0.68
ZFHX4-208	ENST00000522409	MAPK1	P28482	360 aa		10.81	□□□□□ -0.68
ZFHX4-208	ENST00000522409	MTMR3	Q13615	1198 aa		10.81	□□□□□ -0.68
ZFHX4-208	ENST00000522409	ATP7A	Q04656	1500 aa		10.8	□□□□□ -0.68
ZFHX4-208	ENST00000522409	ZC3H13	Q5T200	1668 aa	Known RBP	10.8	□□□□□ -0.68
ZFHX4-208	ENST00000522409	PPEF1	O14829	653 aa	Predicted RBP	10.8	□□□□□ -0.68
ZFHX4-208	ENST00000522409	NPR3	P17342	541 aa		10.8	□□□□□ -0.68
ZFHX4-208	ENST00000522409	SCNN1D	P51172	638 aa		10.8	□□□□□ -0.68
ZFHX4-208	ENST00000522409	VASH1	Q7L8A9	365 aa	Predicted RBP	10.8	□□□□□ -0.68
ZFHX4-208	ENST00000522409	PZP	P20742	1482 aa		10.8	□□□□□ -0.68
ZFHX4-208	ENST00000522409	MIA2	Q96PC5	1412 aa		10.79	□□□□□ -0.68
ZFHX4-208	ENST00000522409	WASL	O00401	505 aa	Predicted RBP	10.79	□□□□□ -0.68
ZFHX4-208	ENST00000522409	FOXO3	O43524	673 aa		10.79	□□□□□ -0.68
ZFHX4-208	ENST00000522409	SKOR1	P84550	965 aa		10.79	□□□□□ -0.68
ZFHX4-208	ENST00000522409	TRIM32	Q13049	653 aa		10.79	□□□□□ -0.68
ZFHX4-208	ENST00000522409	NAA30	Q147X3	362 aa	Predicted RBP	10.79	□□□□□ -0.68
ZFHX4-208	ENST00000522409	CC2D2B	Q6DHV5	1058 aa		10.79	□□□□□ -0.68
ZFHX4-208	ENST00000522409	HELQ	Q8TDG4	1101 aa		10.79	□□□□□ -0.68
ZFHX4-208	ENST00000522409	OSBPL3	Q9H4L5	887 aa		10.79	□□□□□ -0.68
ZFHX4-208	ENST00000522409	TMEM94	Q12767	1356 aa		10.78	□□□□□ -0.68
ZFHX4-208	ENST00000522409	ATAD2	Q6PL18	1390 aa		10.78	□□□□□ -0.68
ZFHX4-208	ENST00000522409	RGS12	O14924	1447 aa		10.78	□□□□□ -0.68
ZFHX4-208	ENST00000522409	ZBTB24	O43167	697 aa	Predicted RBP	10.78	□□□□□ -0.68
ZFHX4-208	ENST00000522409	VAMP1	P23763	118 aa		10.78	□□□□□ -0.68
ZFHX4-208	ENST00000522409	WNT7B	P56706	349 aa		10.78	□□□□□ -0.68
ZFHX4-208	ENST00000522409	TAGLN	Q01995	201 aa	Known RBP	10.78	□□□□□ -0.68
ZFHX4-208	ENST00000522409	COL19A1	Q14993	1142 aa		10.78	□□□□□ -0.68
ZFHX4-208	ENST00000522409	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	10.78	□□□□□ -0.68
ZFHX4-208	ENST00000522409	BACH1	O14867	736 aa		10.77	□□□□□ -0.69
ZFHX4-208	ENST00000522409	TNS4	Q8IZW8	715 aa		10.77	□□□□□ -0.69
ZFHX4-208	ENST00000522409	FGD6	Q6ZV73	1430 aa		10.76	□□□□□ -0.69
ZFHX4-208	ENST00000522409	SYCP2	Q9BX26	1530 aa		10.76	□□□□□ -0.69
ZFHX4-208	ENST00000522409	STAU1	O95793	577 aa	Known RBP	10.76	□□□□□ -0.69
ZFHX4-208	ENST00000522409	EPHA4	P54764	986 aa		10.76	□□□□□ -0.69
ZFHX4-208	ENST00000522409	GDF10	P55107	478 aa		10.76	□□□□□ -0.69
ZFHX4-208	ENST00000522409	SCG3	Q8WXD2	468 aa	Known RBP	10.76	□□□□□ -0.69
ZFHX4-208	ENST00000522409	CDK15	Q96Q40	435 aa		10.76	□□□□□ -0.69
ZFHX4-208	ENST00000522409	COL16A1	Q07092	1604 aa	Predicted RBP	10.76	□□□□□ -0.69
ZFHX4-208	ENST00000522409	ADGB	Q8N7X0	1667 aa		10.76	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms