RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 ADAMTS7Q9UKP4 1686 aa12.58□□□□□ -0.4
TRAPPC9-212ENST00000521944 TMEM88BA6NKF7 163 aa12.58□□□□□ -0.4
TRAPPC9-212ENST00000521944 OCEL1Q9H607 264 aa12.58□□□□□ -0.4
TRAPPC9-212ENST00000521944 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.58□□□□□ -0.42e-7■■■■■ 28.3
TRAPPC9-212ENST00000521944 TONSLQ96HA7 1378 aa12.57□□□□□ -0.4
TRAPPC9-212ENST00000521944 RASSF10A6NK89 507 aa12.57□□□□□ -0.4
TRAPPC9-212ENST00000521944 CRKLP46109 303 aaKnown RBP12.57□□□□□ -0.4
TRAPPC9-212ENST00000521944 EFCAB3Q8N7B9 438 aa12.57□□□□□ -0.4
TRAPPC9-212ENST00000521944 TTLL6Q8N841 843 aa12.57□□□□□ -0.4
TRAPPC9-212ENST00000521944 FLT4P35916 1363 aa12.56□□□□□ -0.4
TRAPPC9-212ENST00000521944 IRX5P78411 483 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC9-212ENST00000521944 ERFEQ4G0M1 354 aa12.56□□□□□ -0.4
TRAPPC9-212ENST00000521944 INTS5Q6P9B9 1019 aaKnown RBP12.56□□□□□ -0.4
TRAPPC9-212ENST00000521944 IFNL2Q8IZJ0 200 aa12.56□□□□□ -0.4
TRAPPC9-212ENST00000521944 EYA1Q99502 592 aa12.56□□□□□ -0.4
TRAPPC9-212ENST00000521944 NFIXQ14938 502 aa12.55□□□□□ -0.4
TRAPPC9-212ENST00000521944 LDHDQ86WU2 507 aa12.55□□□□□ -0.4
TRAPPC9-212ENST00000521944 SIN3AQ96ST3 1273 aa12.55□□□□□ -0.4
TRAPPC9-212ENST00000521944 EMILIN1Q9Y6C2 1016 aa12.55□□□□□ -0.4
TRAPPC9-212ENST00000521944 WDR33Q9C0J8 1336 aaKnown RBP12.55□□□□□ -0.4
TRAPPC9-212ENST00000521944 AFDNP55196 1824 aaKnown RBP12.55□□□□□ -0.4
TRAPPC9-212ENST00000521944 DICER1Q9UPY3 1922 aaKnown RBP12.54□□□□□ -0.4
TRAPPC9-212ENST00000521944 MAP2K1Q02750 393 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC9-212ENST00000521944 DEFB115Q30KQ5 88 aa12.54□□□□□ -0.4
TRAPPC9-212ENST00000521944 USPL1Q5W0Q7 1092 aa12.54□□□□□ -0.4
TRAPPC9-212ENST00000521944 TESK2Q96S53 571 aa12.54□□□□□ -0.4
TRAPPC9-212ENST00000521944 TAF1DQ9H5J8 278 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC9-212ENST00000521944 BCL2L12Q9HB09 334 aa12.54□□□□□ -0.4
TRAPPC9-212ENST00000521944 KIF24Q5T7B8 1368 aa12.54□□□□□ -0.4
TRAPPC9-212ENST00000521944 CARMIL3Q8ND23 1372 aa12.54□□□□□ -0.4
TRAPPC9-212ENST00000521944 NRXN2Q9P2S2 1712 aa12.54□□□□□ -0.4
TRAPPC9-212ENST00000521944 DLEC1Q9Y238 1755 aa12.53□□□□□ -0.4
TRAPPC9-212ENST00000521944 ERVV-2B6SEH9 535 aa12.53□□□□□ -0.4
TRAPPC9-212ENST00000521944 C2CD5Q86YS7 1000 aa12.53□□□□□ -0.4
TRAPPC9-212ENST00000521944 PTCD1O75127 700 aaKnown RBP12.52□□□□□ -0.41
TRAPPC9-212ENST00000521944 L3MBTL3Q96JM7 780 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC9-212ENST00000521944 TSKSQ9UJT2 592 aa12.52□□□□□ -0.41
TRAPPC9-212ENST00000521944 COLQQ9Y215 455 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC9-212ENST00000521944 FER1L6Q2WGJ9 1857 aa12.52□□□□□ -0.41
TRAPPC9-212ENST00000521944 C21orf2O43822 256 aa12.51□□□□□ -0.41
TRAPPC9-212ENST00000521944 CARD11Q9BXL7 1154 aa12.51□□□□□ -0.41
TRAPPC9-212ENST00000521944 MCOLN1Q9GZU1 580 aa12.51□□□□□ -0.41
TRAPPC9-212ENST00000521944 SERPINB2P05120 415 aa12.5□□□□□ -0.41
TRAPPC9-212ENST00000521944 LHX8Q68G74 356 aa12.5□□□□□ -0.41
TRAPPC9-212ENST00000521944 ADAMTSL1Q8N6G6 1762 aa12.5□□□□□ -0.41
TRAPPC9-212ENST00000521944 CASP8AP2Q9UKL3 1982 aa12.49□□□□□ -0.41
TRAPPC9-212ENST00000521944 SOS1Q07889 1333 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC9-212ENST00000521944 LTBP3Q9NS15 1303 aa12.49□□□□□ -0.41
TRAPPC9-212ENST00000521944 H0YIN7 160 aa12.49□□□□□ -0.41
TRAPPC9-212ENST00000521944 FMR1Q06787 632 aaKnown RBP eCLIP12.49□□□□□ -0.41
TRAPPC9-212ENST00000521944 MAP1SQ66K74 1059 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC9-212ENST00000521944 CNTROBQ8N137 903 aa12.49□□□□□ -0.41
TRAPPC9-212ENST00000521944 TJP1Q07157 1748 aa12.48□□□□□ -0.41
TRAPPC9-212ENST00000521944 THSD7BQ9C0I4 1608 aa12.48□□□□□ -0.41
TRAPPC9-212ENST00000521944 WASHC2AQ641Q2 1341 aa12.48□□□□□ -0.41
TRAPPC9-212ENST00000521944 IQCA1LA6NCM1 817 aa12.48□□□□□ -0.41
TRAPPC9-212ENST00000521944 ZPR1O75312 459 aa12.48□□□□□ -0.41
TRAPPC9-212ENST00000521944 RYDENQ9NUL5 291 aaKnown RBP12.48□□□□□ -0.41
TRAPPC9-212ENST00000521944 SCN4AP35499 1836 aa12.48□□□□□ -0.41
TRAPPC9-212ENST00000521944 POTEFA5A3E0 1075 aa12.47□□□□□ -0.41
TRAPPC9-212ENST00000521944 EAPPQ56P03 285 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC9-212ENST00000521944 MAMSTRQ6ZN01 415 aa12.47□□□□□ -0.41
TRAPPC9-212ENST00000521944 PDCD7Q8N8D1 485 aaKnown RBP12.47□□□□□ -0.41
TRAPPC9-212ENST00000521944 CAPNS2Q96L46 248 aa12.47□□□□□ -0.41
TRAPPC9-212ENST00000521944 CFAP44Q96MT7 982 aa12.47□□□□□ -0.41
TRAPPC9-212ENST00000521944 TAOK3Q9H2K8 898 aa12.47□□□□□ -0.41
TRAPPC9-212ENST00000521944 NARFQ9UHQ1 456 aa12.47□□□□□ -0.41
TRAPPC9-212ENST00000521944 ZNF541Q9H0D2 1346 aa12.46□□□□□ -0.41
TRAPPC9-212ENST00000521944 PPM1GO15355 546 aaPredicted RBP12.46□□□□□ -0.41
TRAPPC9-212ENST00000521944 CABP4P57796 275 aa12.46□□□□□ -0.41
TRAPPC9-212ENST00000521944 CYP4F22Q6NT55 531 aa12.46□□□□□ -0.41
TRAPPC9-212ENST00000521944 DNAJC10Q8IXB1 793 aa12.46□□□□□ -0.41
TRAPPC9-212ENST00000521944 NFATC2IPQ8NCF5 419 aa12.46□□□□□ -0.41
TRAPPC9-212ENST00000521944 ZNF622Q969S3 477 aaKnown RBP eCLIP12.46□□□□□ -0.41
TRAPPC9-212ENST00000521944 GPR101Q96P66 508 aaPredicted RBP12.46□□□□□ -0.41
TRAPPC9-212ENST00000521944 ANKRD31Q8N7Z5 1873 aa12.46□□□□□ -0.42
TRAPPC9-212ENST00000521944 LTBP1Q14766 1721 aa12.45□□□□□ -0.42
TRAPPC9-212ENST00000521944 EPHX2P34913 555 aa12.45□□□□□ -0.42
TRAPPC9-212ENST00000521944 NEUROD1Q13562 356 aa12.45□□□□□ -0.42
TRAPPC9-212ENST00000521944 CCDC24Q8N4L8 307 aa12.45□□□□□ -0.42
TRAPPC9-212ENST00000521944 CARD14Q9BXL6 1004 aa12.45□□□□□ -0.42
TRAPPC9-212ENST00000521944 DDX21Q9NR30 783 aaKnown RBP eCLIP12.45□□□□□ -0.42
TRAPPC9-212ENST00000521944 ABT1Q9ULW3 272 aaKnown RBP12.45□□□□□ -0.42
TRAPPC9-212ENST00000521944 SLX4Q8IY92 1834 aa12.45□□□□□ -0.42
TRAPPC9-212ENST00000521944 ST20-MTHFSA0A0A6YYL1 179 aa12.44□□□□□ -0.42
TRAPPC9-212ENST00000521944 G3V3G9 751 aa12.44□□□□□ -0.42
TRAPPC9-212ENST00000521944 AOC2O75106 756 aa12.44□□□□□ -0.42
TRAPPC9-212ENST00000521944 CYP19A1P11511 503 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC9-212ENST00000521944 CST9Q5W186 159 aa12.44□□□□□ -0.42
TRAPPC9-212ENST00000521944 C7orf43Q8WVR3 580 aa12.44□□□□□ -0.42
TRAPPC9-212ENST00000521944 COL11A2P13942 1736 aaPredicted RBP12.43□□□□□ -0.42
TRAPPC9-212ENST00000521944 EIF4A2Q14240 407 aaKnown RBP12.43□□□□□ -0.42
TRAPPC9-212ENST00000521944 BRIP1Q9BX63 1249 aa12.43□□□□□ -0.42
TRAPPC9-212ENST00000521944 POLKQ9UBT6 870 aa12.43□□□□□ -0.42
TRAPPC9-212ENST00000521944 HACL1Q9UJ83 578 aa12.43□□□□□ -0.42
TRAPPC9-212ENST00000521944 ZBTB1Q9Y2K1 713 aa12.43□□□□□ -0.42
TRAPPC9-212ENST00000521944 ANKRD26Q9UPS8 1709 aa12.42□□□□□ -0.42
TRAPPC9-212ENST00000521944 HSP90AB1P08238 724 aaKnown RBP12.42□□□□□ -0.42
TRAPPC9-212ENST00000521944 PRPF38BQ5VTL8 546 aaKnown RBP12.42□□□□□ -0.42
TRAPPC9-212ENST00000521944 BICDL1Q6ZP65 573 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms