RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 TSPYL2Q9H2G4 693 aaPredicted RBP10.49□□□□□ -0.73
CTNNA1-227ENST00000521387 HACL1Q9UJ83 578 aa10.49□□□□□ -0.73
CTNNA1-227ENST00000521387 HPS5Q9UPZ3 1129 aa10.49□□□□□ -0.73
CTNNA1-227ENST00000521387 CNTNAP4Q9C0A0 1308 aa10.49□□□□□ -0.73
CTNNA1-227ENST00000521387 ZNF541Q9H0D2 1346 aa10.49□□□□□ -0.73
CTNNA1-227ENST00000521387 LTBP3Q9NS15 1303 aa10.49□□□□□ -0.73
CTNNA1-227ENST00000521387 DLEC1Q9Y238 1755 aa10.48□□□□□ -0.73
CTNNA1-227ENST00000521387 C2CD5Q86YS7 1000 aa10.48□□□□□ -0.73
CTNNA1-227ENST00000521387 MON2Q7Z3U7 1717 aa10.47□□□□□ -0.73
CTNNA1-227ENST00000521387 SAPCD2Q86UD0 394 aa10.47□□□□□ -0.73
CTNNA1-227ENST00000521387 SCUBE2Q9NQ36 999 aa10.47□□□□□ -0.73
CTNNA1-227ENST00000521387 CARMIL3Q8ND23 1372 aa10.47□□□□□ -0.73
CTNNA1-227ENST00000521387 PNMA8AQ86V59 439 aaPredicted RBP10.46□□□□□ -0.73
CTNNA1-227ENST00000521387 TAOK3Q9H2K8 898 aa10.46□□□□□ -0.73
CTNNA1-227ENST00000521387 TMOD3Q9NYL9 352 aa10.46□□□□□ -0.73
CTNNA1-227ENST00000521387 TRPC6Q9Y210 931 aa10.46□□□□□ -0.73
CTNNA1-227ENST00000521387 COLQQ9Y215 455 aaPredicted RBP10.46□□□□□ -0.73
CTNNA1-227ENST00000521387 RNF123Q5XPI4 1314 aa10.46□□□□□ -0.73
CTNNA1-227ENST00000521387 EVC2Q86UK5 1308 aa10.46□□□□□ -0.73
CTNNA1-227ENST00000521387 SMG6Q86US8 1419 aaKnown RBP10.45□□□□□ -0.74
CTNNA1-227ENST00000521387 INSRP06213 1382 aa10.45□□□□□ -0.74
CTNNA1-227ENST00000521387 NFIXQ14938 502 aa10.45□□□□□ -0.74
CTNNA1-227ENST00000521387 AFDNP55196 1824 aaKnown RBP10.44□□□□□ -0.74
CTNNA1-227ENST00000521387 COL5A3P25940 1745 aaPredicted RBP10.44□□□□□ -0.74
CTNNA1-227ENST00000521387 NRXN2Q9P2S2 1712 aa10.44□□□□□ -0.74
CTNNA1-227ENST00000521387 H0YIN7 160 aa10.44□□□□□ -0.74
CTNNA1-227ENST00000521387 CTU1Q7Z7A3 348 aaKnown RBP10.44□□□□□ -0.74
CTNNA1-227ENST00000521387 AMPHP49418 695 aa10.43□□□□□ -0.74
CTNNA1-227ENST00000521387 RANBP2P49792 3224 aaKnown RBP10.43□□□□□ -0.74
CTNNA1-227ENST00000521387 SERPINB2P05120 415 aa10.42□□□□□ -0.74
CTNNA1-227ENST00000521387 USPL1Q5W0Q7 1092 aa10.42□□□□□ -0.74
CTNNA1-227ENST00000521387 HHIPL1Q96JK4 782 aa10.42□□□□□ -0.74
CTNNA1-227ENST00000521387 BCL2L12Q9HB09 334 aa10.42□□□□□ -0.74
CTNNA1-227ENST00000521387 ZNF831Q5JPB2 1677 aa10.41□□□□□ -0.74
CTNNA1-227ENST00000521387 CEP290O15078 2479 aa10.41□□□□□ -0.74
CTNNA1-227ENST00000521387 TRPM7Q96QT4 1865 aa10.41□□□□□ -0.74
CTNNA1-227ENST00000521387 CRKLP46109 303 aaKnown RBP10.41□□□□□ -0.74
CTNNA1-227ENST00000521387 CCER1Q8TC90 406 aaPredicted RBP10.41□□□□□ -0.74
CTNNA1-227ENST00000521387 ZNF622Q969S3 477 aaKnown RBP eCLIP10.41□□□□□ -0.742e-10■□□□□ 9.9
CTNNA1-227ENST00000521387 BMP2KQ9NSY1 1161 aaPredicted RBP10.41□□□□□ -0.74
CTNNA1-227ENST00000521387 INTS5Q6P9B9 1019 aaKnown RBP10.4□□□□□ -0.74
CTNNA1-227ENST00000521387 CDAN1Q8IWY9 1227 aa10.4□□□□□ -0.74
CTNNA1-227ENST00000521387 RNF186Q9NXI6 227 aa10.4□□□□□ -0.74
CTNNA1-227ENST00000521387 BRCA2P51587 3418 aa10.4□□□□□ -0.75
CTNNA1-227ENST00000521387 FZD9O00144 591 aa10.39□□□□□ -0.75
CTNNA1-227ENST00000521387 RRS1Q15050 365 aaKnown RBP10.39□□□□□ -0.75
CTNNA1-227ENST00000521387 C7orf43Q8WVR3 580 aa10.39□□□□□ -0.75
CTNNA1-227ENST00000521387 SAGE1Q9NXZ1 904 aa10.39□□□□□ -0.75
CTNNA1-227ENST00000521387 SLX4Q8IY92 1834 aa10.39□□□□□ -0.75
CTNNA1-227ENST00000521387 FAM155AB1AL88 458 aaPredicted RBP10.38□□□□□ -0.75
CTNNA1-227ENST00000521387 TRPA1O75762 1119 aa10.38□□□□□ -0.75
CTNNA1-227ENST00000521387 CELF2O95319 508 aaKnown RBP10.38□□□□□ -0.75
CTNNA1-227ENST00000521387 EPS15P42566 896 aa10.38□□□□□ -0.75
CTNNA1-227ENST00000521387 NOGQ13253 232 aa10.38□□□□□ -0.75
CTNNA1-227ENST00000521387 HSP90AB2PQ58FF8 381 aa10.38□□□□□ -0.75
CTNNA1-227ENST00000521387 KIF12Q96FN5 646 aa10.38□□□□□ -0.75
CTNNA1-227ENST00000521387 SLC12A5Q9H2X9 1139 aa10.38□□□□□ -0.75
CTNNA1-227ENST00000521387 ZNF277Q9NRM2 450 aaPredicted RBP10.38□□□□□ -0.75
CTNNA1-227ENST00000521387 EDC4Q6P2E9 1401 aaKnown RBP10.38□□□□□ -0.75
CTNNA1-227ENST00000521387 PHKG2P15735 406 aa10.37□□□□□ -0.75
CTNNA1-227ENST00000521387 CCDC24Q8N4L8 307 aa10.37□□□□□ -0.75
CTNNA1-227ENST00000521387 ANKRD31Q8N7Z5 1873 aa10.37□□□□□ -0.75
CTNNA1-227ENST00000521387 HTTP42858 3142 aa10.37□□□□□ -0.75
CTNNA1-227ENST00000521387 COL11A2P13942 1736 aaPredicted RBP10.36□□□□□ -0.75
CTNNA1-227ENST00000521387 SCNN1DP51172 638 aa10.36□□□□□ -0.75
CTNNA1-227ENST00000521387 BICDL1Q6ZP65 573 aa10.36□□□□□ -0.75
CTNNA1-227ENST00000521387 GPC2Q8N158 579 aa10.36□□□□□ -0.75
CTNNA1-227ENST00000521387 SYNE4Q8N205 404 aa10.36□□□□□ -0.75
CTNNA1-227ENST00000521387 UNC80Q8N2C7 3258 aa10.36□□□□□ -0.75
CTNNA1-227ENST00000521387 RTL1A6NKG5 1358 aa10.36□□□□□ -0.75
CTNNA1-227ENST00000521387 ZPR1O75312 459 aa10.35□□□□□ -0.75
CTNNA1-227ENST00000521387 KIF23Q02241 960 aaPredicted RBP10.35□□□□□ -0.75
CTNNA1-227ENST00000521387 PRPF40BQ6NWY9 871 aaKnown RBP10.35□□□□□ -0.75
CTNNA1-227ENST00000521387 OLFM4Q6UX06 510 aa10.35□□□□□ -0.75
CTNNA1-227ENST00000521387 COL25A1Q9BXS0 654 aaPredicted RBP10.35□□□□□ -0.75
CTNNA1-227ENST00000521387 CACNA1SQ13698 1873 aa10.35□□□□□ -0.75
CTNNA1-227ENST00000521387 SOS1Q07889 1333 aaPredicted RBP10.34□□□□□ -0.75
CTNNA1-227ENST00000521387 SCN11AQ9UI33 1791 aa10.34□□□□□ -0.75
CTNNA1-227ENST00000521387 KIAA0100Q14667 2235 aaKnown RBP10.34□□□□□ -0.75
CTNNA1-227ENST00000521387 NCAPD2Q15021 1401 aa10.34□□□□□ -0.75
CTNNA1-227ENST00000521387 PKN2Q16513 984 aaKnown RBP10.34□□□□□ -0.75
CTNNA1-227ENST00000521387 AKAP4Q5JQC9 854 aa10.34□□□□□ -0.75
CTNNA1-227ENST00000521387 BRIP1Q9BX63 1249 aa10.34□□□□□ -0.75
CTNNA1-227ENST00000521387 GLIS2Q9BZE0 524 aaPredicted RBP10.34□□□□□ -0.75
CTNNA1-227ENST00000521387 NARFQ9UHQ1 456 aa10.34□□□□□ -0.75
CTNNA1-227ENST00000521387 SPG7Q9UQ90 795 aa10.34□□□□□ -0.75
CTNNA1-227ENST00000521387 A0A1W2PP64 1363 aa10.34□□□□□ -0.75
CTNNA1-227ENST00000521387 CENPFP49454 3210 aa10.33□□□□□ -0.76
CTNNA1-227ENST00000521387 VCANP13611 3396 aa10.33□□□□□ -0.76
CTNNA1-227ENST00000521387 MAP3K13O43283 966 aa10.33□□□□□ -0.76
CTNNA1-227ENST00000521387 PTCD1O75127 700 aaKnown RBP10.33□□□□□ -0.76
CTNNA1-227ENST00000521387 FKBP4Q02790 459 aaKnown RBP eCLIP10.33□□□□□ -0.76
CTNNA1-227ENST00000521387 USP50Q70EL3 339 aaPredicted RBP10.33□□□□□ -0.76
CTNNA1-227ENST00000521387 IFNL2Q8IZJ0 200 aa10.33□□□□□ -0.76
CTNNA1-227ENST00000521387 COL4A5P29400 1685 aa10.32□□□□□ -0.76
CTNNA1-227ENST00000521387 SRGNP10124 158 aa10.32□□□□□ -0.76
CTNNA1-227ENST00000521387 PDE6BP35913 854 aa10.32□□□□□ -0.76
CTNNA1-227ENST00000521387 PRR5LQ6MZQ0 368 aa10.32□□□□□ -0.76
CTNNA1-227ENST00000521387 DLK2Q6UY11 383 aa10.32□□□□□ -0.76
CTNNA1-227ENST00000521387 HDGFL2Q7Z4V5 671 aaPredicted RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms