RNA–Protein interactions for RNA: ENST00000521127.1

SNHG6-204, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2

Gene SNHG6, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-204ENST00000521127 DZIP3Q86Y13 1208 aaKnown RBP25.03■■□□□ 1.6
SNHG6-204ENST00000521127 CNKSR1Q969H4 720 aa25.03■■□□□ 1.6
SNHG6-204ENST00000521127 TAOK3Q9H2K8 898 aa25.03■■□□□ 1.6
SNHG6-204ENST00000521127 BTBD11A6QL63 1104 aa25.02■■□□□ 1.6
SNHG6-204ENST00000521127 DDNO94850 711 aaPredicted RBP25.02■■□□□ 1.6
SNHG6-204ENST00000521127 PRPF40BQ6NWY9 871 aaKnown RBP25.02■■□□□ 1.6
SNHG6-204ENST00000521127 CACNA1SQ13698 1873 aa25.02■■□□□ 1.6
SNHG6-204ENST00000521127 BCORQ6W2J9 1755 aa25.01■■□□□ 1.59
SNHG6-204ENST00000521127 PRAMEF22A3QJZ6 481 aa25.01■■□□□ 1.59
SNHG6-204ENST00000521127 POTEIP0CG38 1075 aa25.01■■□□□ 1.59
SNHG6-204ENST00000521127 POTEJP0CG39 1038 aa25.01■■□□□ 1.59
SNHG6-204ENST00000521127 PRKAR2BP31323 418 aa25.01■■□□□ 1.59
SNHG6-204ENST00000521127 ST5P78524 1137 aa25■■□□□ 1.59
SNHG6-204ENST00000521127 CHADLQ6NUI6 762 aa25■■□□□ 1.59
SNHG6-204ENST00000521127 NPM2Q86SE8 214 aaKnown RBP25■■□□□ 1.59
SNHG6-204ENST00000521127 MASTLQ96GX5 879 aa25■■□□□ 1.59
SNHG6-204ENST00000521127 RSPH6AQ9H0K4 717 aa25■■□□□ 1.59
SNHG6-204ENST00000521127 NPHP1O15259 732 aa24.99■■□□□ 1.59
SNHG6-204ENST00000521127 C7orf43Q8WVR3 580 aa24.99■■□□□ 1.59
SNHG6-204ENST00000521127 ARFGEF2Q9Y6D5 1785 aa24.98■■□□□ 1.59
SNHG6-204ENST00000521127 SOGA3Q5TF21 947 aa24.96■■□□□ 1.59
SNHG6-204ENST00000521127 CLEC4GQ6UXB4 293 aa24.95■■□□□ 1.58
SNHG6-204ENST00000521127 NBPF5PQ86XG9 351 aaPredicted RBP24.95■■□□□ 1.58
SNHG6-204ENST00000521127 CREBZFQ9NS37 354 aa24.95■■□□□ 1.58
SNHG6-204ENST00000521127 NBPF26B4DH59 902 aa24.94■■□□□ 1.58
SNHG6-204ENST00000521127 NBPF10Q6P3W6 841 aaKnown RBP24.94■■□□□ 1.58
SNHG6-204ENST00000521127 NBPF15Q8N660 670 aa24.94■■□□□ 1.58
SNHG6-204ENST00000521127 MKRN1Q9UHC7 482 aaKnown RBP24.94■■□□□ 1.58
SNHG6-204ENST00000521127 KLRG2A4D1S0 409 aaPredicted RBP24.93■■□□□ 1.58
SNHG6-204ENST00000521127 SNRPA1P09661 255 aaKnown RBP24.93■■□□□ 1.58
SNHG6-204ENST00000521127 MCM10Q7L590 875 aa24.93■■□□□ 1.58
SNHG6-204ENST00000521127 NPR1P16066 1061 aa24.92■■□□□ 1.58
SNHG6-204ENST00000521127 CCDC93Q567U6 631 aa24.91■■□□□ 1.58
SNHG6-204ENST00000521127 OLFM4Q6UX06 510 aa24.91■■□□□ 1.58
SNHG6-204ENST00000521127 L3MBTL3Q96JM7 780 aaPredicted RBP24.91■■□□□ 1.58
SNHG6-204ENST00000521127 CFAP53Q96M91 514 aa24.91■■□□□ 1.58
SNHG6-204ENST00000521127 TAF1DQ9H5J8 278 aaPredicted RBP24.91■■□□□ 1.58
SNHG6-204ENST00000521127 DCTN1Q14203 1278 aa24.9■■□□□ 1.58
SNHG6-204ENST00000521127 ZNF652Q9Y2D9 606 aa24.9■■□□□ 1.58
SNHG6-204ENST00000521127 PASKQ96RG2 1323 aa24.89■■□□□ 1.58
SNHG6-204ENST00000521127 FKBP4Q02790 459 aaKnown RBP eCLIP24.89■■□□□ 1.58
SNHG6-204ENST00000521127 ZNF277Q9NRM2 450 aaPredicted RBP24.89■■□□□ 1.58
SNHG6-204ENST00000521127 NIP7Q9Y221 180 aaKnown RBP eCLIP24.89■■□□□ 1.58
SNHG6-204ENST00000521127 SCN4AP35499 1836 aa24.89■■□□□ 1.57
SNHG6-204ENST00000521127 ZNF541Q9H0D2 1346 aa24.88■■□□□ 1.57
SNHG6-204ENST00000521127 IQCA1LA6NCM1 817 aa24.88■■□□□ 1.57
SNHG6-204ENST00000521127 U2AF1L5P0DN76 240 aaPredicted RBP24.88■■□□□ 1.57
SNHG6-204ENST00000521127 U2AF1Q01081 240 aaKnown RBP eCLIP24.88■■□□□ 1.57
SNHG6-204ENST00000521127 LDHDQ86WU2 507 aa24.88■■□□□ 1.57
SNHG6-204ENST00000521127 RTF1Q92541 710 aaKnown RBP24.88■■□□□ 1.57
SNHG6-204ENST00000521127 NUDCQ9Y266 331 aa24.88■■□□□ 1.57
SNHG6-204ENST00000521127 FAM177BA6PVY3 158 aa24.87■■□□□ 1.57
SNHG6-204ENST00000521127 HLFQ16534 295 aa24.87■■□□□ 1.57
SNHG6-204ENST00000521127 TPTE2Q6XPS3 522 aa24.87■■□□□ 1.57
SNHG6-204ENST00000521127 CNTNAP1P78357 1384 aa24.86■■□□□ 1.57
SNHG6-204ENST00000521127 RGL2O15211 777 aa24.86■■□□□ 1.57
SNHG6-204ENST00000521127 ITGBL1O95965 494 aaPredicted RBP24.85■■□□□ 1.57
SNHG6-204ENST00000521127 PPP2R1AP30153 589 aa24.84■■□□□ 1.57
SNHG6-204ENST00000521127 FOXN1O15353 648 aa24.83■■□□□ 1.57
SNHG6-204ENST00000521127 HTATSF1O43719 755 aaKnown RBP24.83■■□□□ 1.57
SNHG6-204ENST00000521127 RTKN2Q8IZC4 609 aa24.83■■□□□ 1.57
SNHG6-204ENST00000521127 MIS18AQ9NYP9 233 aa24.83■■□□□ 1.57
SNHG6-204ENST00000521127 TAF7Q15545 349 aaPredicted RBP24.82■■□□□ 1.56
SNHG6-204ENST00000521127 EAPPQ56P03 285 aaPredicted RBP24.82■■□□□ 1.56
SNHG6-204ENST00000521127 SYNE4Q8N205 404 aa24.82■■□□□ 1.56
SNHG6-204ENST00000521127 HACL1Q9UJ83 578 aa24.82■■□□□ 1.56
SNHG6-204ENST00000521127 ADAMTSL1Q8N6G6 1762 aa24.8■■□□□ 1.56
SNHG6-204ENST00000521127 SNED1Q8TER0 1413 aa24.8■■□□□ 1.56
SNHG6-204ENST00000521127 FZD9O00144 591 aa24.8■■□□□ 1.56
SNHG6-204ENST00000521127 ALDH1B1P30837 517 aa24.8■■□□□ 1.56
SNHG6-204ENST00000521127 EPHX2P34913 555 aa24.8■■□□□ 1.56
SNHG6-204ENST00000521127 IARSP41252 1262 aaKnown RBP24.8■■□□□ 1.56
SNHG6-204ENST00000521127 VEGFBP49765 207 aa24.8■■□□□ 1.56
SNHG6-204ENST00000521127 TMEM88BA6NKF7 163 aa24.79■■□□□ 1.56
SNHG6-204ENST00000521127 CLEC11AQ9Y240 323 aa24.79■■□□□ 1.56
SNHG6-204ENST00000521127 ABCC12Q96J65 1359 aa24.79■■□□□ 1.56
SNHG6-204ENST00000521127 RNF123Q5XPI4 1314 aa24.78■■□□□ 1.56
SNHG6-204ENST00000521127 GTF2E1P29083 439 aaPredicted RBP24.77■■□□□ 1.56
SNHG6-204ENST00000521127 CRY2Q49AN0 593 aa24.77■■□□□ 1.56
SNHG6-204ENST00000521127 NUTM1Q86Y26 1132 aa24.77■■□□□ 1.56
SNHG6-204ENST00000521127 NGEFQ8N5V2 710 aa24.77■■□□□ 1.56
SNHG6-204ENST00000521127 LAMB4A4D0S4 1761 aa24.76■■□□□ 1.55
SNHG6-204ENST00000521127 MAP1SQ66K74 1059 aaPredicted RBP24.76■■□□□ 1.55
SNHG6-204ENST00000521127 NUP98P52948 1817 aa24.75■■□□□ 1.55
SNHG6-204ENST00000521127 TTLL7Q6ZT98 887 aa24.75■■□□□ 1.55
SNHG6-204ENST00000521127 CNTROBQ8N137 903 aa24.75■■□□□ 1.55
SNHG6-204ENST00000521127 PSMD1Q99460 953 aa24.75■■□□□ 1.55
SNHG6-204ENST00000521127 PRDM10Q9NQV6 1147 aa24.75■■□□□ 1.55
SNHG6-204ENST00000521127 COL4A5P29400 1685 aa24.75■■□□□ 1.55
SNHG6-204ENST00000521127 ERVV-1B6SEH8 477 aa24.74■■□□□ 1.55
SNHG6-204ENST00000521127 PNMA8AQ86V59 439 aaPredicted RBP24.74■■□□□ 1.55
SNHG6-204ENST00000521127 GPC2Q8N158 579 aa24.74■■□□□ 1.55
SNHG6-204ENST00000521127 MAP3K15Q6ZN16 1313 aa24.73■■□□□ 1.55
SNHG6-204ENST00000521127 SLC51AQ86UW1 340 aa24.73■■□□□ 1.55
SNHG6-204ENST00000521127 NYXQ9GZU5 481 aa24.73■■□□□ 1.55
SNHG6-204ENST00000521127 WBP1LQ9NX94 342 aa24.73■■□□□ 1.55
SNHG6-204ENST00000521127 RRP7AQ9Y3A4 280 aaKnown RBP24.73■■□□□ 1.55
SNHG6-204ENST00000521127 DLG5Q8TDM6 1919 aa24.73■■□□□ 1.55
SNHG6-204ENST00000521127 CTCFP49711 727 aaPredicted RBP24.72■■□□□ 1.55
SNHG6-204ENST00000521127 EIF4A1P60842 406 aaKnown RBP24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms