RNA–Protein interactions for RNA: ENST00000520752.1

SHPRH-208, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 4

Gene SHPRH, Length 821 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-208ENST00000520752 DPYDQ12882 1025 aa10.7□□□□□ -0.7
SHPRH-208ENST00000520752 CCDC184Q52MB2 194 aa10.7□□□□□ -0.7
SHPRH-208ENST00000520752 MEIOBQ8N635 442 aa10.7□□□□□ -0.7
SHPRH-208ENST00000520752 RETREG2Q8NC44 543 aa10.7□□□□□ -0.7
SHPRH-208ENST00000520752 TPCN2Q8NHX9 752 aa10.7□□□□□ -0.7
SHPRH-208ENST00000520752 FAM200AQ8TCP9 573 aa10.7□□□□□ -0.7
SHPRH-208ENST00000520752 PRIMPOLQ96LW4 560 aa10.7□□□□□ -0.7
SHPRH-208ENST00000520752 R3HCC1Q9Y3T6 440 aaKnown RBP10.7□□□□□ -0.7
SHPRH-208ENST00000520752 ARAP1Q96P48 1450 aa10.69□□□□□ -0.7
SHPRH-208ENST00000520752 SMCPP49901 116 aaPredicted RBP10.69□□□□□ -0.7
SHPRH-208ENST00000520752 PKDCCQ504Y2 493 aa10.69□□□□□ -0.7
SHPRH-208ENST00000520752 FEZ1Q99689 392 aa10.69□□□□□ -0.7
SHPRH-208ENST00000520752 PRDM10Q9NQV6 1147 aa10.69□□□□□ -0.7
SHPRH-208ENST00000520752 USTQ9Y2C2 406 aa10.69□□□□□ -0.7
SHPRH-208ENST00000520752 MROH2BQ7Z745 1585 aa10.69□□□□□ -0.7
SHPRH-208ENST00000520752 ROCK2O75116 1388 aaKnown RBP10.68□□□□□ -0.7
SHPRH-208ENST00000520752 LRPPRCP42704 1394 aaKnown RBP10.68□□□□□ -0.7
SHPRH-208ENST00000520752 TMEM229AB2RXF0 380 aa10.68□□□□□ -0.7
SHPRH-208ENST00000520752 M0R2N6 131 aa10.68□□□□□ -0.7
SHPRH-208ENST00000520752 GTF2F1P35269 517 aaKnown RBP eCLIP10.68□□□□□ -0.7
SHPRH-208ENST00000520752 PTGIRP43119 386 aa10.68□□□□□ -0.7
SHPRH-208ENST00000520752 SCNN1DP51172 638 aa10.68□□□□□ -0.7
SHPRH-208ENST00000520752 SEC13P55735 322 aa10.68□□□□□ -0.7
SHPRH-208ENST00000520752 CTC1Q2NKJ3 1217 aa10.68□□□□□ -0.7
SHPRH-208ENST00000520752 KIF3AQ9Y496 699 aa10.68□□□□□ -0.7
SHPRH-208ENST00000520752 TOP2AP11388 1531 aaKnown RBP10.68□□□□□ -0.7
SHPRH-208ENST00000520752 INHAP05111 366 aa10.67□□□□□ -0.7
SHPRH-208ENST00000520752 HSPA5P11021 654 aaKnown RBP10.67□□□□□ -0.7
SHPRH-208ENST00000520752 GDF10P55107 478 aa10.67□□□□□ -0.7
SHPRH-208ENST00000520752 RALBP1Q15311 655 aa10.67□□□□□ -0.7
SHPRH-208ENST00000520752 ESCO1Q5FWF5 840 aa10.67□□□□□ -0.7
SHPRH-208ENST00000520752 TMEM164Q5U3C3 297 aa10.67□□□□□ -0.7
SHPRH-208ENST00000520752 CRIPAKQ8N1N5 446 aa10.67□□□□□ -0.7
SHPRH-208ENST00000520752 MYRIPQ8NFW9 859 aa10.67□□□□□ -0.7
SHPRH-208ENST00000520752 STK32AQ8WU08 396 aa10.67□□□□□ -0.7
SHPRH-208ENST00000520752 XAGE2Q96GT9 111 aa10.67□□□□□ -0.7
SHPRH-208ENST00000520752 HIRIP3Q9BW71 556 aaPredicted RBP10.67□□□□□ -0.7
SHPRH-208ENST00000520752 ETNK1Q9HBU6 452 aa10.67□□□□□ -0.7
SHPRH-208ENST00000520752 HDAC5Q9UQL6 1122 aa10.67□□□□□ -0.7
SHPRH-208ENST00000520752 KDM5BQ9UGL1 1544 aa10.67□□□□□ -0.7
SHPRH-208ENST00000520752 WIZO95785 1651 aa10.66□□□□□ -0.7
SHPRH-208ENST00000520752 TMEM88BA6NKF7 163 aa10.66□□□□□ -0.7
SHPRH-208ENST00000520752 VGLL3A8MV65 326 aa10.66□□□□□ -0.7
SHPRH-208ENST00000520752 TIGD1Q96MW7 591 aa10.66□□□□□ -0.7
SHPRH-208ENST00000520752 TSEN34Q9BSV6 310 aaKnown RBP10.66□□□□□ -0.7
SHPRH-208ENST00000520752 A0A1W2PRU2 124 aa10.65□□□□□ -0.7
SHPRH-208ENST00000520752 FAM69CQ0P6D2 419 aa10.65□□□□□ -0.7
SHPRH-208ENST00000520752 CTR9Q6PD62 1173 aa10.65□□□□□ -0.7
SHPRH-208ENST00000520752 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.65□□□□□ -0.7
SHPRH-208ENST00000520752 AGBL1Q96MI9 1066 aa10.65□□□□□ -0.7
SHPRH-208ENST00000520752 SLC4A9Q96Q91 983 aa10.65□□□□□ -0.7
SHPRH-208ENST00000520752 UPF2Q9HAU5 1272 aaKnown RBP10.65□□□□□ -0.7
SHPRH-208ENST00000520752 ARHGEF10LQ9HCE6 1279 aa10.65□□□□□ -0.7
SHPRH-208ENST00000520752 ZNF358Q9NW07 568 aa10.65□□□□□ -0.7
SHPRH-208ENST00000520752 CALCOCO1Q9P1Z2 691 aa10.65□□□□□ -0.7
SHPRH-208ENST00000520752 UACAQ9BZF9 1416 aa10.65□□□□□ -0.7
SHPRH-208ENST00000520752 PLEKHH2Q8IVE3 1493 aa10.64□□□□□ -0.71
SHPRH-208ENST00000520752 SFI1A8K8P3 1242 aa10.64□□□□□ -0.71
SHPRH-208ENST00000520752 BACH1O14867 736 aa10.64□□□□□ -0.71
SHPRH-208ENST00000520752 STAU1O95793 577 aaKnown RBP10.64□□□□□ -0.71
SHPRH-208ENST00000520752 HSP90AB1P08238 724 aaKnown RBP10.64□□□□□ -0.71
SHPRH-208ENST00000520752 MCCP23508 829 aa10.64□□□□□ -0.71
SHPRH-208ENST00000520752 CLN3Q13286 438 aa10.64□□□□□ -0.71
SHPRH-208ENST00000520752 PDCL2Q8N4E4 241 aa10.64□□□□□ -0.71
SHPRH-208ENST00000520752 ESYT1Q9BSJ8 1104 aa10.64□□□□□ -0.71
SHPRH-208ENST00000520752 IRX2Q9BZI1 471 aaPredicted RBP10.64□□□□□ -0.71
SHPRH-208ENST00000520752 HRH3Q9Y5N1 445 aa10.64□□□□□ -0.71
SHPRH-208ENST00000520752 MAPK8IP3Q9UPT6 1336 aa10.63□□□□□ -0.71
SHPRH-208ENST00000520752 TULP2O00295 520 aa10.63□□□□□ -0.71
SHPRH-208ENST00000520752 APPP05067 770 aa10.63□□□□□ -0.71
SHPRH-208ENST00000520752 RELBQ01201 579 aa10.63□□□□□ -0.71
SHPRH-208ENST00000520752 SWI5Q1ZZU3 235 aa10.63□□□□□ -0.71
SHPRH-208ENST00000520752 PNISRQ8TF01 805 aaKnown RBP10.63□□□□□ -0.71
SHPRH-208ENST00000520752 TRAIPQ9BWF2 469 aa10.63□□□□□ -0.71
SHPRH-208ENST00000520752 ZKSCAN5Q9Y2L8 839 aa10.63□□□□□ -0.71
SHPRH-208ENST00000520752 KIAA1107Q9UPP5 1409 aa10.63□□□□□ -0.71
SHPRH-208ENST00000520752 USP19O94966 1318 aa10.62□□□□□ -0.71
SHPRH-208ENST00000520752 UPP2O95045 317 aa10.62□□□□□ -0.71
SHPRH-208ENST00000520752 IL2RAP01589 272 aa10.62□□□□□ -0.71
SHPRH-208ENST00000520752 NASPP49321 788 aaPredicted RBP10.62□□□□□ -0.71
SHPRH-208ENST00000520752 LINC00528Q8N1L1 170 aa10.62□□□□□ -0.71
SHPRH-208ENST00000520752 CNKSR1Q969H4 720 aa10.62□□□□□ -0.71
SHPRH-208ENST00000520752 GBP4Q96PP9 640 aa10.62□□□□□ -0.71
SHPRH-208ENST00000520752 CGNQ9P2M7 1197 aaKnown RBP10.62□□□□□ -0.71
SHPRH-208ENST00000520752 BRD4O60885 1362 aaPredicted RBP10.62□□□□□ -0.71
SHPRH-208ENST00000520752 EIF3AQ14152 1382 aaKnown RBP10.62□□□□□ -0.71
SHPRH-208ENST00000520752 AXIN1O15169 862 aa10.61□□□□□ -0.71
SHPRH-208ENST00000520752 SPINT1O43278 529 aa10.61□□□□□ -0.71
SHPRH-208ENST00000520752 MFAP1P55081 439 aaKnown RBP10.61□□□□□ -0.71
SHPRH-208ENST00000520752 PDLIM2Q96JY6 352 aa10.61□□□□□ -0.71
SHPRH-208ENST00000520752 ZNF395Q9H8N7 513 aaPredicted RBP10.61□□□□□ -0.71
SHPRH-208ENST00000520752 RAB6BQ9NRW1 208 aa10.61□□□□□ -0.71
SHPRH-208ENST00000520752 CCDC39Q9UFE4 941 aa10.61□□□□□ -0.71
SHPRH-208ENST00000520752 CCDC18Q5T9S5 1454 aa10.61□□□□□ -0.71
SHPRH-208ENST00000520752 RAPGEF2Q9Y4G8 1499 aa10.61□□□□□ -0.71
SHPRH-208ENST00000520752 CTTNBP2Q8WZ74 1663 aa10.6□□□□□ -0.71
SHPRH-208ENST00000520752 CC2D1BQ5T0F9 858 aaKnown RBP10.6□□□□□ -0.71
SHPRH-208ENST00000520752 MRPL14Q6P1L8 145 aaKnown RBP10.6□□□□□ -0.71
SHPRH-208ENST00000520752 ZNF771Q7L3S4 317 aaPredicted RBP10.6□□□□□ -0.71
SHPRH-208ENST00000520752 CLP1Q92989 425 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms