RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 PLBD2Q8NHP8 589 aa22.67■■□□□ 1.22
SDC2-205ENST00000520233 ARXQ96QS3 562 aa22.67■■□□□ 1.22
SDC2-205ENST00000520233 API5Q9BZZ5 524 aaKnown RBP22.67■■□□□ 1.22
SDC2-205ENST00000520233 PNPLA7Q6ZV29 1317 aa22.66■■□□□ 1.22
SDC2-205ENST00000520233 ERVV-1B6SEH8 477 aa22.66■■□□□ 1.22
SDC2-205ENST00000520233 RFC4P35249 363 aa22.66■■□□□ 1.22
SDC2-205ENST00000520233 NARFQ9UHQ1 456 aa22.66■■□□□ 1.22
SDC2-205ENST00000520233 RNF123Q5XPI4 1314 aa22.65■■□□□ 1.22
SDC2-205ENST00000520233 PI4KAP2A4QPH2 592 aa22.65■■□□□ 1.22
SDC2-205ENST00000520233 CAMTA2O94983 1202 aa22.65■■□□□ 1.22
SDC2-205ENST00000520233 ATF7IPQ6VMQ6 1270 aa22.65■■□□□ 1.22
SDC2-205ENST00000520233 RIC3Q7Z5B4 369 aa22.65■■□□□ 1.22
SDC2-205ENST00000520233 PI4KAP1Q8N8J0 262 aa22.65■■□□□ 1.22
SDC2-205ENST00000520233 ADCY9O60503 1353 aa22.64■■□□□ 1.22
SDC2-205ENST00000520233 TUBGCP6Q96RT7 1819 aa22.64■■□□□ 1.22
SDC2-205ENST00000520233 RGL2O15211 777 aa22.64■■□□□ 1.21
SDC2-205ENST00000520233 ZPR1O75312 459 aa22.64■■□□□ 1.21
SDC2-205ENST00000520233 TRIM27P14373 513 aa22.64■■□□□ 1.21
SDC2-205ENST00000520233 RRP1P56182 461 aaKnown RBP22.64■■□□□ 1.21
SDC2-205ENST00000520233 COL23A1Q86Y22 540 aaPredicted RBP22.64■■□□□ 1.21
SDC2-205ENST00000520233 ZBTB3Q9H5J0 574 aa22.64■■□□□ 1.21
SDC2-205ENST00000520233 MAP3K2Q9Y2U5 619 aa22.64■■□□□ 1.21
SDC2-205ENST00000520233 SUPT16HQ9Y5B9 1047 aaKnown RBP22.64■■□□□ 1.21
SDC2-205ENST00000520233 QSER1Q2KHR3 1735 aa22.64■■□□□ 1.21
SDC2-205ENST00000520233 USP42Q9H9J4 1324 aaKnown RBP22.63■■□□□ 1.21
SDC2-205ENST00000520233 GIGYF2Q6Y7W6 1299 aaKnown RBP22.63■■□□□ 1.21
SDC2-205ENST00000520233 DNAAF4Q8WXU2 420 aa22.63■■□□□ 1.21
SDC2-205ENST00000520233 PLIN1O60240 522 aa22.62■■□□□ 1.21
SDC2-205ENST00000520233 SRP68Q9UHB9 627 aaKnown RBP22.62■■□□□ 1.21
SDC2-205ENST00000520233 C4AP0C0L4 1744 aa22.62■■□□□ 1.21
SDC2-205ENST00000520233 F6X3S4 739 aa22.61■■□□□ 1.21
SDC2-205ENST00000520233 MS4A1P11836 297 aa22.61■■□□□ 1.21
SDC2-205ENST00000520233 HLFQ16534 295 aa22.61■■□□□ 1.21
SDC2-205ENST00000520233 USPL1Q5W0Q7 1092 aa22.61■■□□□ 1.21
SDC2-205ENST00000520233 CLEC4GQ6UXB4 293 aa22.61■■□□□ 1.21
SDC2-205ENST00000520233 METTL22Q9BUU2 404 aaPredicted RBP22.61■■□□□ 1.21
SDC2-205ENST00000520233 ZNF652Q9Y2D9 606 aa22.61■■□□□ 1.21
SDC2-205ENST00000520233 BCL2L12Q9HB09 334 aa22.6■■□□□ 1.21
SDC2-205ENST00000520233 BCORQ6W2J9 1755 aa22.6■■□□□ 1.21
SDC2-205ENST00000520233 ABCC4O15439 1325 aa22.59■■□□□ 1.21
SDC2-205ENST00000520233 SCN7AQ01118 1682 aa22.59■■□□□ 1.21
SDC2-205ENST00000520233 MSH5O43196 834 aa22.59■■□□□ 1.21
SDC2-205ENST00000520233 HSP90AB3PQ58FF7 597 aa22.59■■□□□ 1.21
SDC2-205ENST00000520233 DZIP1LQ8IYY4 767 aaKnown RBP22.59■■□□□ 1.21
SDC2-205ENST00000520233 TNNQ9UQP3 1299 aa22.59■■□□□ 1.21
SDC2-205ENST00000520233 ARFGEF2Q9Y6D5 1785 aa22.58■■□□□ 1.21
SDC2-205ENST00000520233 NEXNQ0ZGT2 675 aa22.58■■□□□ 1.21
SDC2-205ENST00000520233 TCIRG1Q13488 830 aa22.58■■□□□ 1.21
SDC2-205ENST00000520233 PDE3AQ14432 1141 aa22.58■■□□□ 1.21
SDC2-205ENST00000520233 CLUAP1Q96AJ1 413 aa22.58■■□□□ 1.21
SDC2-205ENST00000520233 PXDNLA1KZ92 1463 aa22.58■■□□□ 1.2
SDC2-205ENST00000520233 GYS1P13807 737 aa22.57■■□□□ 1.2
SDC2-205ENST00000520233 BEND3Q5T5X7 828 aa22.57■■□□□ 1.2
SDC2-205ENST00000520233 SLC4A10Q6U841 1118 aa22.57■■□□□ 1.2
SDC2-205ENST00000520233 FTSJ3Q8IY81 847 aaKnown RBP22.57■■□□□ 1.2
SDC2-205ENST00000520233 MYD88Q99836 296 aa22.57■■□□□ 1.2
SDC2-205ENST00000520233 ATP10DQ9P241 1426 aa22.57■■□□□ 1.2
SDC2-205ENST00000520233 R3HDM1Q15032 1099 aaKnown RBP22.56■■□□□ 1.2
SDC2-205ENST00000520233 LINS1Q8NG48 757 aa22.56■■□□□ 1.2
SDC2-205ENST00000520233 CCT4P50991 539 aaKnown RBP22.55■■□□□ 1.2
SDC2-205ENST00000520233 INTS3Q68E01 1043 aaKnown RBP22.55■■□□□ 1.2
SDC2-205ENST00000520233 ZNF34Q8IZ26 560 aa22.55■■□□□ 1.2
SDC2-205ENST00000520233 ISCA1Q9BUE6 129 aa22.55■■□□□ 1.2
SDC2-205ENST00000520233 RLBP1P12271 317 aa22.54■■□□□ 1.2
SDC2-205ENST00000520233 TRIM28Q13263 835 aaKnown RBP22.54■■□□□ 1.2
SDC2-205ENST00000520233 NLGN1Q8N2Q7 840 aa22.54■■□□□ 1.2
SDC2-205ENST00000520233 SLC16A10Q8TF71 515 aa22.54■■□□□ 1.2
SDC2-205ENST00000520233 SRCIN1Q9C0H9 1055 aa22.54■■□□□ 1.2
SDC2-205ENST00000520233 NUP98P52948 1817 aa22.54■■□□□ 1.2
SDC2-205ENST00000520233 ALDH1L1O75891 902 aa22.53■■□□□ 1.2
SDC2-205ENST00000520233 IGKV5-2P06315 115 aa22.53■■□□□ 1.2
SDC2-205ENST00000520233 FKBP8Q14318 412 aa22.53■■□□□ 1.2
SDC2-205ENST00000520233 C20orf194Q5TEA3 1177 aa22.53■■□□□ 1.2
SDC2-205ENST00000520233 TBC1D9BQ66K14 1250 aa22.53■■□□□ 1.2
SDC2-205ENST00000520233 TMEM57Q8N5G2 664 aa22.53■■□□□ 1.2
SDC2-205ENST00000520233 PANK1Q8TE04 598 aa22.53■■□□□ 1.2
SDC2-205ENST00000520233 NEURL1BA8MQ27 555 aa22.52■■□□□ 1.2
SDC2-205ENST00000520233 ATP5J2-PTCD1G3V325 749 aa22.52■■□□□ 1.2
SDC2-205ENST00000520233 PDGFDQ9GZP0 370 aaPredicted RBP22.52■■□□□ 1.2
SDC2-205ENST00000520233 NIP7Q9Y221 180 aaKnown RBP eCLIP22.52■■□□□ 1.2
SDC2-205ENST00000520233 IBTKQ9P2D0 1353 aaPredicted RBP22.51■■□□□ 1.19
SDC2-205ENST00000520233 GPTP24298 496 aa22.51■■□□□ 1.19
SDC2-205ENST00000520233 CWF19L2Q2TBE0 894 aaKnown RBP22.51■■□□□ 1.19
SDC2-205ENST00000520233 PARP10Q53GL7 1025 aa22.51■■□□□ 1.19
SDC2-205ENST00000520233 CCDC191Q8NCU4 936 aa22.51■■□□□ 1.19
SDC2-205ENST00000520233 ANKRD36CQ5JPF3 1778 aa22.5■■□□□ 1.19
SDC2-205ENST00000520233 NLRP10Q86W26 655 aa22.5■■□□□ 1.19
SDC2-205ENST00000520233 UBN2Q6ZU65 1347 aa22.5■■□□□ 1.19
SDC2-205ENST00000520233 N4BP2Q86UW6 1770 aaPredicted RBP22.49■■□□□ 1.19
SDC2-205ENST00000520233 CASZ1Q86V15 1759 aa22.49■■□□□ 1.19
SDC2-205ENST00000520233 PSDA5PKW4 1024 aaPredicted RBP22.49■■□□□ 1.19
SDC2-205ENST00000520233 TM4SF1P30408 202 aa22.49■■□□□ 1.19
SDC2-205ENST00000520233 NFIXQ14938 502 aa22.49■■□□□ 1.19
SDC2-205ENST00000520233 BICDL1Q6ZP65 573 aa22.49■■□□□ 1.19
SDC2-205ENST00000520233 SETDB2Q96T68 719 aa22.49■■□□□ 1.19
SDC2-205ENST00000520233 CWC25Q9NXE8 425 aaPredicted RBP22.49■■□□□ 1.19
SDC2-205ENST00000520233 GCKRQ14397 625 aa22.48■■□□□ 1.19
SDC2-205ENST00000520233 MVPQ14764 893 aaKnown RBP22.48■■□□□ 1.19
SDC2-205ENST00000520233 ITPRIPQ8IWB1 547 aa22.48■■□□□ 1.19
SDC2-205ENST00000520233 COG6Q9Y2V7 657 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms