RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 KIF24Q5T7B8 1368 aa6.94□□□□□ -1.3
SDCBP-207ENST00000520168 COG3Q96JB2 828 aa6.93□□□□□ -1.3
SDCBP-207ENST00000520168 DCAF5Q96JK2 942 aa6.93□□□□□ -1.3
SDCBP-207ENST00000520168 PUS7Q96PZ0 661 aaKnown RBP6.93□□□□□ -1.3
SDCBP-207ENST00000520168 RRAGCQ9HB90 399 aa6.93□□□□□ -1.3
SDCBP-207ENST00000520168 PRDM10Q9NQV6 1147 aa6.93□□□□□ -1.3
SDCBP-207ENST00000520168 RNF181Q9P0P0 153 aa6.93□□□□□ -1.3
SDCBP-207ENST00000520168 PIM2Q9P1W9 311 aa6.93□□□□□ -1.3
SDCBP-207ENST00000520168 MAP3K19Q56UN5 1328 aa6.93□□□□□ -1.3
SDCBP-207ENST00000520168 ANKRD26Q9UPS8 1709 aa6.93□□□□□ -1.3
SDCBP-207ENST00000520168 KDM6AO15550 1401 aaPredicted RBP6.93□□□□□ -1.3
SDCBP-207ENST00000520168 LOC102724428A0A0B4J2F2 783 aa6.92□□□□□ -1.3
SDCBP-207ENST00000520168 A0A0G2JLW4 131 aa6.92□□□□□ -1.3
SDCBP-207ENST00000520168 GNPATO15228 680 aa6.92□□□□□ -1.3
SDCBP-207ENST00000520168 VEGFAP15692 232 aaPredicted RBP6.92□□□□□ -1.3
SDCBP-207ENST00000520168 SIK1P57059 783 aa6.92□□□□□ -1.3
SDCBP-207ENST00000520168 TMF1P82094 1093 aa6.92□□□□□ -1.3
SDCBP-207ENST00000520168 DALRD3Q5D0E6 543 aaKnown RBP6.92□□□□□ -1.3
SDCBP-207ENST00000520168 ERICH6Q7L0X2 663 aa6.92□□□□□ -1.3
SDCBP-207ENST00000520168 AMIGO3Q86WK7 504 aa6.92□□□□□ -1.3
SDCBP-207ENST00000520168 KCTD12Q96CX2 325 aaKnown RBP6.92□□□□□ -1.3
SDCBP-207ENST00000520168 KCNK17Q96T54 332 aa6.92□□□□□ -1.3
SDCBP-207ENST00000520168 RYDENQ9NUL5 291 aaKnown RBP6.92□□□□□ -1.3
SDCBP-207ENST00000520168 PARP3Q9Y6F1 533 aa6.92□□□□□ -1.3
SDCBP-207ENST00000520168 TNRC18O15417 2968 aaPredicted RBP6.92□□□□□ -1.3
SDCBP-207ENST00000520168 DPEP1P16444 411 aa6.91□□□□□ -1.3
SDCBP-207ENST00000520168 NKX1-1Q15270 411 aaPredicted RBP6.91□□□□□ -1.3
SDCBP-207ENST00000520168 TRAPPC3LQ5T215 181 aa6.91□□□□□ -1.3
SDCBP-207ENST00000520168 LINC00116Q8NCU8 138 aa6.91□□□□□ -1.3
SDCBP-207ENST00000520168 TMC1Q8TDI8 760 aa6.91□□□□□ -1.3
SDCBP-207ENST00000520168 OXER1Q8TDS5 423 aa6.91□□□□□ -1.3
SDCBP-207ENST00000520168 RTCBQ9Y3I0 505 aaKnown RBP6.91□□□□□ -1.3
SDCBP-207ENST00000520168 SCN4AP35499 1836 aa6.9□□□□□ -1.3
SDCBP-207ENST00000520168 AFDNP55196 1824 aaKnown RBP6.9□□□□□ -1.3
SDCBP-207ENST00000520168 MYH14Q7Z406 1995 aaKnown RBP6.9□□□□□ -1.3
SDCBP-207ENST00000520168 GLTPD2A6NH11 291 aa6.9□□□□□ -1.3
SDCBP-207ENST00000520168 ATP6V1AP38606 617 aa6.9□□□□□ -1.3
SDCBP-207ENST00000520168 NBPF6Q5VWK0 638 aa6.9□□□□□ -1.3
SDCBP-207ENST00000520168 AIDAQ96BJ3 306 aa6.9□□□□□ -1.3
SDCBP-207ENST00000520168 NBPF4Q96M43 638 aa6.9□□□□□ -1.3
SDCBP-207ENST00000520168 TMOD3Q9NYL9 352 aa6.9□□□□□ -1.3
SDCBP-207ENST00000520168 VPS9D1Q9Y2B5 631 aa6.9□□□□□ -1.3
SDCBP-207ENST00000520168 INSRP06213 1382 aa6.9□□□□□ -1.31
SDCBP-207ENST00000520168 FLT4P35916 1363 aa6.9□□□□□ -1.31
SDCBP-207ENST00000520168 NCAPD2Q15021 1401 aa6.9□□□□□ -1.31
SDCBP-207ENST00000520168 NRXN2Q9P2S2 1712 aa6.9□□□□□ -1.31
SDCBP-207ENST00000520168 CYP27B1O15528 508 aa6.89□□□□□ -1.31
SDCBP-207ENST00000520168 KCNA3P22001 575 aa6.89□□□□□ -1.31
SDCBP-207ENST00000520168 CTCFP49711 727 aaPredicted RBP6.89□□□□□ -1.31
SDCBP-207ENST00000520168 RC3H1Q5TC82 1133 aaKnown RBP6.89□□□□□ -1.31
SDCBP-207ENST00000520168 PIGBQ92521 554 aa6.89□□□□□ -1.31
SDCBP-207ENST00000520168 SLC4A5Q9BY07 1137 aa6.89□□□□□ -1.31
SDCBP-207ENST00000520168 SPG7Q9UQ90 795 aa6.89□□□□□ -1.31
SDCBP-207ENST00000520168 KDRP35968 1356 aa6.89□□□□□ -1.31
SDCBP-207ENST00000520168 FER1L6Q2WGJ9 1857 aa6.89□□□□□ -1.31
SDCBP-207ENST00000520168 CNTNAP1P78357 1384 aa6.88□□□□□ -1.31
SDCBP-207ENST00000520168 CNTNAP4Q9C0A0 1308 aa6.88□□□□□ -1.31
SDCBP-207ENST00000520168 GYS1P13807 737 aa6.88□□□□□ -1.31
SDCBP-207ENST00000520168 LMNB1P20700 586 aa6.88□□□□□ -1.31
SDCBP-207ENST00000520168 RFC4P35249 363 aa6.88□□□□□ -1.31
SDCBP-207ENST00000520168 ZNF454Q8N9F8 522 aa6.88□□□□□ -1.31
SDCBP-207ENST00000520168 CRISPLD2Q9H0B8 497 aa6.88□□□□□ -1.31
SDCBP-207ENST00000520168 SLC12A5Q9H2X9 1139 aa6.88□□□□□ -1.31
SDCBP-207ENST00000520168 BCL2L12Q9HB09 334 aa6.88□□□□□ -1.31
SDCBP-207ENST00000520168 ARFGEF2Q9Y6D5 1785 aa6.87□□□□□ -1.31
SDCBP-207ENST00000520168 MLLT1Q03111 559 aaPredicted RBP6.87□□□□□ -1.31
SDCBP-207ENST00000520168 ITPK1Q13572 414 aa6.87□□□□□ -1.31
SDCBP-207ENST00000520168 FAM161AQ3B820 660 aa6.87□□□□□ -1.31
SDCBP-207ENST00000520168 PPP1R15BQ5SWA1 713 aa6.87□□□□□ -1.31
SDCBP-207ENST00000520168 USHBP1Q8N6Y0 703 aa6.87□□□□□ -1.31
SDCBP-207ENST00000520168 ARHGEF1Q92888 912 aaKnown RBP6.87□□□□□ -1.31
SDCBP-207ENST00000520168 ADAMTS7Q9UKP4 1686 aa6.87□□□□□ -1.31
SDCBP-207ENST00000520168 THSD7BQ9C0I4 1608 aa6.87□□□□□ -1.31
SDCBP-207ENST00000520168 TONSLQ96HA7 1378 aa6.86□□□□□ -1.31
SDCBP-207ENST00000520168 FOXN1O15353 648 aa6.86□□□□□ -1.31
SDCBP-207ENST00000520168 RPS6KA4O75676 772 aa6.86□□□□□ -1.31
SDCBP-207ENST00000520168 SMIM5Q71RC9 77 aa6.86□□□□□ -1.31
SDCBP-207ENST00000520168 IFNL2Q8IZJ0 200 aa6.86□□□□□ -1.31
SDCBP-207ENST00000520168 L3MBTL2Q969R5 705 aa6.86□□□□□ -1.31
SDCBP-207ENST00000520168 ASAP1Q9ULH1 1129 aa6.86□□□□□ -1.31
SDCBP-207ENST00000520168 TJP1Q07157 1748 aa6.86□□□□□ -1.31
SDCBP-207ENST00000520168 PTPREP23469 700 aa6.85□□□□□ -1.31
SDCBP-207ENST00000520168 PDE4AP27815 886 aa6.85□□□□□ -1.31
SDCBP-207ENST00000520168 RGS19P49795 217 aa6.85□□□□□ -1.31
SDCBP-207ENST00000520168 FOSBP53539 338 aa6.85□□□□□ -1.31
SDCBP-207ENST00000520168 RRS1Q15050 365 aaKnown RBP6.85□□□□□ -1.31
SDCBP-207ENST00000520168 ABHD8Q96I13 439 aa6.85□□□□□ -1.31
SDCBP-207ENST00000520168 MKRN1Q9UHC7 482 aaKnown RBP6.85□□□□□ -1.31
SDCBP-207ENST00000520168 CACNA1SQ13698 1873 aa6.85□□□□□ -1.31
SDCBP-207ENST00000520168 USP42Q9H9J4 1324 aaKnown RBP6.84□□□□□ -1.31
SDCBP-207ENST00000520168 ERVV-2B6SEH9 535 aa6.84□□□□□ -1.31
SDCBP-207ENST00000520168 BHMG1C9JSJ3 638 aaPredicted RBP6.84□□□□□ -1.31
SDCBP-207ENST00000520168 HSP90AB1P08238 724 aaKnown RBP6.84□□□□□ -1.31
SDCBP-207ENST00000520168 PTPN5P54829 565 aa6.84□□□□□ -1.31
SDCBP-207ENST00000520168 HSP90AB2PQ58FF8 381 aa6.84□□□□□ -1.31
SDCBP-207ENST00000520168 CARD11Q9BXL7 1154 aa6.84□□□□□ -1.31
SDCBP-207ENST00000520168 ATG3Q9NT62 314 aa6.84□□□□□ -1.31
SDCBP-207ENST00000520168 PDZRN3Q9UPQ7 1066 aa6.84□□□□□ -1.31
SDCBP-207ENST00000520168 ADAMTSL1Q8N6G6 1762 aa6.83□□□□□ -1.32
SDCBP-207ENST00000520168 SCN11AQ9UI33 1791 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms