RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 CHPF2Q9P2E5 772 aa15.31■□□□□ 0.04
HPS4-218ENST00000519774 CAMTA2O94983 1202 aa15.3■□□□□ 0.04
HPS4-218ENST00000519774 EXOSC9Q06265 439 aaKnown RBP15.3■□□□□ 0.04
HPS4-218ENST00000519774 PDIA6Q15084 440 aa15.3■□□□□ 0.04
HPS4-218ENST00000519774 BCL2L12Q9HB09 334 aa15.3■□□□□ 0.04
HPS4-218ENST00000519774 TWISTNBQ3B726 338 aaPredicted RBP15.29■□□□□ 0.04
HPS4-218ENST00000519774 KIF6Q6ZMV9 814 aa15.29■□□□□ 0.04
HPS4-218ENST00000519774 BICDL1Q6ZP65 573 aa15.29■□□□□ 0.04
HPS4-218ENST00000519774 TTLL7Q6ZT98 887 aa15.29■□□□□ 0.04
HPS4-218ENST00000519774 DDX21Q9NR30 783 aaKnown RBP eCLIP15.29■□□□□ 0.04
HPS4-218ENST00000519774 E9PSI1 815 aa15.28■□□□□ 0.04
HPS4-218ENST00000519774 AIMP1Q12904 312 aaKnown RBP15.28■□□□□ 0.04
HPS4-218ENST00000519774 CDCA7LQ96GN5 454 aa15.28■□□□□ 0.04
HPS4-218ENST00000519774 DBF4Q9UBU7 674 aaPredicted RBP15.28■□□□□ 0.04
HPS4-218ENST00000519774 TCERG1O14776 1098 aaKnown RBP15.27■□□□□ 0.04
HPS4-218ENST00000519774 DDR1Q08345 913 aa15.27■□□□□ 0.04
HPS4-218ENST00000519774 NFIXQ14938 502 aa15.27■□□□□ 0.04
HPS4-218ENST00000519774 CCDC30Q5VVM6 783 aa15.27■□□□□ 0.04
HPS4-218ENST00000519774 TBC1D9BQ66K14 1250 aa15.27■□□□□ 0.04
HPS4-218ENST00000519774 LRP10Q7Z4F1 713 aa15.27■□□□□ 0.04
HPS4-218ENST00000519774 XAGE3Q8WTP9 111 aa15.27■□□□□ 0.04
HPS4-218ENST00000519774 FHDC1Q9C0D6 1143 aaPredicted RBP15.27■□□□□ 0.04
HPS4-218ENST00000519774 ZBTB3Q9H5J0 574 aa15.27■□□□□ 0.04
HPS4-218ENST00000519774 ZNF652Q9Y2D9 606 aa15.27■□□□□ 0.04
HPS4-218ENST00000519774 PARP3Q9Y6F1 533 aa15.27■□□□□ 0.04
HPS4-218ENST00000519774 MAP3K15Q6ZN16 1313 aa15.26■□□□□ 0.03
HPS4-218ENST00000519774 SLFN5Q08AF3 891 aa15.26■□□□□ 0.03
HPS4-218ENST00000519774 COPS6Q7L5N1 327 aa15.26■□□□□ 0.03
HPS4-218ENST00000519774 NUP98P52948 1817 aa15.26■□□□□ 0.03
HPS4-218ENST00000519774 AFDNP55196 1824 aaKnown RBP15.25■□□□□ 0.03
HPS4-218ENST00000519774 HLFQ16534 295 aa15.25■□□□□ 0.03
HPS4-218ENST00000519774 STK31Q9BXU1 1019 aa15.25■□□□□ 0.03
HPS4-218ENST00000519774 CHMP4AQ9BY43 222 aa15.25■□□□□ 0.03
HPS4-218ENST00000519774 HYPKQ9NX55 129 aa15.25■□□□□ 0.03
HPS4-218ENST00000519774 POLRMTO00411 1230 aaKnown RBP15.24■□□□□ 0.03
HPS4-218ENST00000519774 TM4SF1P30408 202 aa15.24■□□□□ 0.03
HPS4-218ENST00000519774 CARMIL3Q8ND23 1372 aa15.24■□□□□ 0.03
HPS4-218ENST00000519774 ERVV-1B6SEH8 477 aa15.23■□□□□ 0.03
HPS4-218ENST00000519774 VAMP4O75379 141 aa15.23■□□□□ 0.03
HPS4-218ENST00000519774 CLEC4GQ6UXB4 293 aa15.23■□□□□ 0.03
HPS4-218ENST00000519774 PHAXQ9H814 394 aaKnown RBP15.23■□□□□ 0.03
HPS4-218ENST00000519774 C10orf71Q711Q0 1435 aa15.23■□□□□ 0.03
HPS4-218ENST00000519774 NRXN2Q9P2S2 1712 aa15.23■□□□□ 0.03
HPS4-218ENST00000519774 ANKRD36CQ5JPF3 1778 aa15.22■□□□□ 0.03
HPS4-218ENST00000519774 ARFGEF2Q9Y6D5 1785 aa15.22■□□□□ 0.03
HPS4-218ENST00000519774 SERPINB2P05120 415 aa15.22■□□□□ 0.03
HPS4-218ENST00000519774 SETDB2Q96T68 719 aa15.22■□□□□ 0.03
HPS4-218ENST00000519774 SYT17Q9BSW7 474 aa15.22■□□□□ 0.03
HPS4-218ENST00000519774 NIP7Q9Y221 180 aaKnown RBP eCLIP15.22■□□□□ 0.03
HPS4-218ENST00000519774 ZBED9Q6R2W3 1325 aa15.21■□□□□ 0.03
HPS4-218ENST00000519774 ATP10DQ9P241 1426 aa15.21■□□□□ 0.03
HPS4-218ENST00000519774 FAM177BA6PVY3 158 aa15.21■□□□□ 0.03
HPS4-218ENST00000519774 NPHP1O15259 732 aa15.21■□□□□ 0.03
HPS4-218ENST00000519774 ATXN8OSP0DMR3 200 aa15.21■□□□□ 0.03
HPS4-218ENST00000519774 GPTP24298 496 aa15.21■□□□□ 0.03
HPS4-218ENST00000519774 GIGYF2Q6Y7W6 1299 aaKnown RBP15.21■□□□□ 0.03
HPS4-218ENST00000519774 NLGN2Q8NFZ4 835 aa15.21■□□□□ 0.03
HPS4-218ENST00000519774 KIF13BQ9NQT8 1826 aa15.21■□□□□ 0.03
HPS4-218ENST00000519774 RGL2O15211 777 aa15.2■□□□□ 0.02
HPS4-218ENST00000519774 CACNB1Q02641 598 aaPredicted RBP15.2■□□□□ 0.02
HPS4-218ENST00000519774 CD2APQ9Y5K6 639 aa15.2■□□□□ 0.02
HPS4-218ENST00000519774 SRCAPQ6ZRS2 3230 aa15.2■□□□□ 0.02
HPS4-218ENST00000519774 CACNA1FO60840 1977 aa15.19■□□□□ 0.02
HPS4-218ENST00000519774 ANKRD13DQ6ZTN6 518 aa15.19■□□□□ 0.02
HPS4-218ENST00000519774 G2E3Q7L622 706 aa15.19■□□□□ 0.02
HPS4-218ENST00000519774 NBPF5PQ86XG9 351 aaPredicted RBP15.19■□□□□ 0.02
HPS4-218ENST00000519774 TRMT2AQ8IZ69 625 aaKnown RBP15.19■□□□□ 0.02
HPS4-218ENST00000519774 CCDC24Q8N4L8 307 aa15.19■□□□□ 0.02
HPS4-218ENST00000519774 CNBD1Q8NA66 436 aa15.19■□□□□ 0.02
HPS4-218ENST00000519774 PLBD2Q8NHP8 589 aa15.19■□□□□ 0.02
HPS4-218ENST00000519774 N4BP2Q86UW6 1770 aaPredicted RBP15.19■□□□□ 0.02
HPS4-218ENST00000519774 PRR5LQ6MZQ0 368 aa15.18■□□□□ 0.02
HPS4-218ENST00000519774 RIC3Q7Z5B4 369 aa15.18■□□□□ 0.02
HPS4-218ENST00000519774 UBN2Q6ZU65 1347 aa15.17■□□□□ 0.02
HPS4-218ENST00000519774 KIAA1551Q9HCM1 1747 aa15.17■□□□□ 0.02
HPS4-218ENST00000519774 ANKRD31Q8N7Z5 1873 aa15.17■□□□□ 0.02
HPS4-218ENST00000519774 PXDNLA1KZ92 1463 aa15.17■□□□□ 0.02
HPS4-218ENST00000519774 DDX58O95786 925 aaKnown RBP15.17■□□□□ 0.02
HPS4-218ENST00000519774 FLIIQ13045 1269 aa15.17■□□□□ 0.02
HPS4-218ENST00000519774 HSP90AB3PQ58FF7 597 aa15.17■□□□□ 0.02
HPS4-218ENST00000519774 ZNF34Q8IZ26 560 aa15.17■□□□□ 0.02
HPS4-218ENST00000519774 WWC3Q9ULE0 1092 aa15.17■□□□□ 0.02
HPS4-218ENST00000519774 ST5P78524 1137 aa15.16■□□□□ 0.02
HPS4-218ENST00000519774 TCIRG1Q13488 830 aa15.16■□□□□ 0.02
HPS4-218ENST00000519774 PELP1Q8IZL8 1130 aaKnown RBP15.16■□□□□ 0.02
HPS4-218ENST00000519774 ZNF428Q96B54 188 aa15.16■□□□□ 0.02
HPS4-218ENST00000519774 ADCY9O60503 1353 aa15.15■□□□□ 0.02
HPS4-218ENST00000519774 ATP5J2-PTCD1G3V325 749 aa15.15■□□□□ 0.02
HPS4-218ENST00000519774 GTF2E1P29083 439 aaPredicted RBP15.15■□□□□ 0.02
HPS4-218ENST00000519774 FKBP5Q13451 457 aaPredicted RBP15.15■□□□□ 0.02
HPS4-218ENST00000519774 PARP10Q53GL7 1025 aa15.15■□□□□ 0.02
HPS4-218ENST00000519774 MYD88Q99836 296 aa15.15■□□□□ 0.02
HPS4-218ENST00000519774 BCL2L13Q9BXK5 485 aa15.15■□□□□ 0.02
HPS4-218ENST00000519774 MAP3K2Q9Y2U5 619 aa15.15■□□□□ 0.02
HPS4-218ENST00000519774 A0A0G2JLW4 131 aa15.14■□□□□ 0.01
HPS4-218ENST00000519774 PI4KAP2A4QPH2 592 aa15.14■□□□□ 0.01
HPS4-218ENST00000519774 CHRNA5P30532 468 aa15.14■□□□□ 0.01
HPS4-218ENST00000519774 SUSD4Q5VX71 490 aa15.14■□□□□ 0.01
HPS4-218ENST00000519774 KSR2Q6VAB6 950 aa15.14■□□□□ 0.01
HPS4-218ENST00000519774 TPTE2Q6XPS3 522 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms