RNA–Protein interactions for RNA: ENST00000519643.5

SH3PXD2B-203, Transcript of SH3 and PX domains 2B, humanhuman

TSL 1 (best) BASIC

Gene SH3PXD2B, Length 1,394 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2B-203ENST00000519643 SMARCC1Q92922 1105 aaPredicted RBP19.17■□□□□ 0.66
SH3PXD2B-203ENST00000519643 ZNF496Q96IT1 587 aaPredicted RBP19.17■□□□□ 0.66
SH3PXD2B-203ENST00000519643 CICQ96RK0 1608 aaPredicted RBP19.16■□□□□ 0.66
SH3PXD2B-203ENST00000519643 HMGB2P26583 209 aaKnown RBP19.16■□□□□ 0.66
SH3PXD2B-203ENST00000519643 ITPRIPQ8IWB1 547 aa19.16■□□□□ 0.66
SH3PXD2B-203ENST00000519643 LINC00116Q8NCU8 138 aa19.16■□□□□ 0.66
SH3PXD2B-203ENST00000519643 FMNL2Q96PY5 1086 aa19.16■□□□□ 0.66
SH3PXD2B-203ENST00000519643 TMOD3Q9NYL9 352 aa19.16■□□□□ 0.66
SH3PXD2B-203ENST00000519643 KCPQ6ZWJ8 1503 aa19.15■□□□□ 0.66
SH3PXD2B-203ENST00000519643 KIF3CO14782 793 aa19.15■□□□□ 0.66
SH3PXD2B-203ENST00000519643 DDX19BQ9UMR2 479 aa19.15■□□□□ 0.66
SH3PXD2B-203ENST00000519643 PRAMEF22A3QJZ6 481 aa19.14■□□□□ 0.65
SH3PXD2B-203ENST00000519643 LAMB4A4D0S4 1761 aa19.14■□□□□ 0.65
SH3PXD2B-203ENST00000519643 SNRPA1P09661 255 aaKnown RBP19.13■□□□□ 0.65
SH3PXD2B-203ENST00000519643 SSFA2P28290 1259 aa19.13■□□□□ 0.65
SH3PXD2B-203ENST00000519643 FLIIQ13045 1269 aa19.13■□□□□ 0.65
SH3PXD2B-203ENST00000519643 CHPF2Q9P2E5 772 aa19.13■□□□□ 0.65
SH3PXD2B-203ENST00000519643 KIAA1551Q9HCM1 1747 aa19.13■□□□□ 0.65
SH3PXD2B-203ENST00000519643 LOC102724428A0A0B4J2F2 783 aa19.12■□□□□ 0.65
SH3PXD2B-203ENST00000519643 SIK1P57059 783 aa19.12■□□□□ 0.65
SH3PXD2B-203ENST00000519643 ITPK1Q13572 414 aa19.12■□□□□ 0.65
SH3PXD2B-203ENST00000519643 DBF4Q9UBU7 674 aaPredicted RBP19.12■□□□□ 0.65
SH3PXD2B-203ENST00000519643 INTS3Q68E01 1043 aaKnown RBP19.1■□□□□ 0.65
SH3PXD2B-203ENST00000519643 PXDNLA1KZ92 1463 aa19.1■□□□□ 0.65
SH3PXD2B-203ENST00000519643 FKBP5Q13451 457 aaPredicted RBP19.09■□□□□ 0.65
SH3PXD2B-203ENST00000519643 CHMP4BQ9H444 224 aaKnown RBP19.09■□□□□ 0.65
SH3PXD2B-203ENST00000519643 ASAP1Q9ULH1 1129 aa19.09■□□□□ 0.65
SH3PXD2B-203ENST00000519643 KIF13BQ9NQT8 1826 aa19.09■□□□□ 0.65
SH3PXD2B-203ENST00000519643 N4BP2Q86UW6 1770 aaPredicted RBP19.09■□□□□ 0.65
SH3PXD2B-203ENST00000519643 GNPATO15228 680 aa19.08■□□□□ 0.65
SH3PXD2B-203ENST00000519643 PHAXQ9H814 394 aaKnown RBP19.08■□□□□ 0.65
SH3PXD2B-203ENST00000519643 DDX21Q9NR30 783 aaKnown RBP eCLIP19.08■□□□□ 0.65
SH3PXD2B-203ENST00000519643 PROSER3Q2NL68 480 aa19.07■□□□□ 0.64
SH3PXD2B-203ENST00000519643 ATG3Q9NT62 314 aa19.07■□□□□ 0.64
SH3PXD2B-203ENST00000519643 ZBTB40Q9NUA8 1239 aa19.07■□□□□ 0.64
SH3PXD2B-203ENST00000519643 HYPKQ9NX55 129 aa19.07■□□□□ 0.64
SH3PXD2B-203ENST00000519643 USP16Q9Y5T5 823 aa19.07■□□□□ 0.64
SH3PXD2B-203ENST00000519643 F6X3S4 739 aa19.06■□□□□ 0.64
SH3PXD2B-203ENST00000519643 ZBTB7BO15156 539 aaPredicted RBP19.06■□□□□ 0.64
SH3PXD2B-203ENST00000519643 ANXA1P04083 346 aa19.06■□□□□ 0.64
SH3PXD2B-203ENST00000519643 MMP10P09238 476 aa19.06■□□□□ 0.64
SH3PXD2B-203ENST00000519643 PDIA6Q15084 440 aa19.06■□□□□ 0.64
SH3PXD2B-203ENST00000519643 KDM2BQ8NHM5 1336 aa19.06■□□□□ 0.64
SH3PXD2B-203ENST00000519643 PTCD1O75127 700 aaKnown RBP19.06■□□□□ 0.64
SH3PXD2B-203ENST00000519643 CCT4P50991 539 aaKnown RBP19.06■□□□□ 0.64
SH3PXD2B-203ENST00000519643 PCDHB15Q9Y5E8 787 aa19.06■□□□□ 0.64
SH3PXD2B-203ENST00000519643 C10orf71Q711Q0 1435 aa19.05■□□□□ 0.64
SH3PXD2B-203ENST00000519643 ATP6V1AP38606 617 aa19.05■□□□□ 0.64
SH3PXD2B-203ENST00000519643 CENPQQ7L2Z9 268 aaPredicted RBP19.05■□□□□ 0.64
SH3PXD2B-203ENST00000519643 ERBB4Q15303 1308 aa19.04■□□□□ 0.64
SH3PXD2B-203ENST00000519643 SLC4A10Q6U841 1118 aa19.04■□□□□ 0.64
SH3PXD2B-203ENST00000519643 VSIG10Q8N0Z9 540 aa19.04■□□□□ 0.64
SH3PXD2B-203ENST00000519643 DNAJC5GQ8N7S2 189 aa19.03■□□□□ 0.64
SH3PXD2B-203ENST00000519643 SLC4A9Q96Q91 983 aa19.03■□□□□ 0.64
SH3PXD2B-203ENST00000519643 APLP1P51693 650 aa19.02■□□□□ 0.64
SH3PXD2B-203ENST00000519643 A0A0G2JLW4 131 aa19.01■□□□□ 0.63
SH3PXD2B-203ENST00000519643 IGHDP01880 384 aa19.01■□□□□ 0.63
SH3PXD2B-203ENST00000519643 LRP10Q7Z4F1 713 aa19.01■□□□□ 0.63
SH3PXD2B-203ENST00000519643 RBM42Q9BTD8 480 aaKnown RBP19.01■□□□□ 0.63
SH3PXD2B-203ENST00000519643 TEX13AQ9BXU3 409 aaPredicted RBP19.01■□□□□ 0.63
SH3PXD2B-203ENST00000519643 BCS1LQ9Y276 419 aa19.01■□□□□ 0.63
SH3PXD2B-203ENST00000519643 BRCA1P38398 1863 aaKnown RBP19■□□□□ 0.63
SH3PXD2B-203ENST00000519643 PI4KAP2A4QPH2 592 aa19■□□□□ 0.63
SH3PXD2B-203ENST00000519643 TOMM70O94826 608 aa19■□□□□ 0.63
SH3PXD2B-203ENST00000519643 MYL6BP14649 208 aa19■□□□□ 0.63
SH3PXD2B-203ENST00000519643 TGFB2P61812 414 aa19■□□□□ 0.63
SH3PXD2B-203ENST00000519643 PI4KAP1Q8N8J0 262 aa19■□□□□ 0.63
SH3PXD2B-203ENST00000519643 DNAAF4Q8WXU2 420 aa19■□□□□ 0.63
SH3PXD2B-203ENST00000519643 NMRK2Q9NPI5 230 aa19■□□□□ 0.63
SH3PXD2B-203ENST00000519643 C4AP0C0L4 1744 aa19■□□□□ 0.63
SH3PXD2B-203ENST00000519643 ZNF831Q5JPB2 1677 aa18.99■□□□□ 0.63
SH3PXD2B-203ENST00000519643 COL5A3P25940 1745 aaPredicted RBP18.99■□□□□ 0.63
SH3PXD2B-203ENST00000519643 DDX58O95786 925 aaKnown RBP18.99■□□□□ 0.63
SH3PXD2B-203ENST00000519643 DPEP1P16444 411 aa18.99■□□□□ 0.63
SH3PXD2B-203ENST00000519643 KSR2Q6VAB6 950 aa18.99■□□□□ 0.63
SH3PXD2B-203ENST00000519643 RWDD1Q9H446 243 aaPredicted RBP18.99■□□□□ 0.63
SH3PXD2B-203ENST00000519643 TJP1Q07157 1748 aa18.98■□□□□ 0.63
SH3PXD2B-203ENST00000519643 NBPF26B4DH59 902 aa18.98■□□□□ 0.63
SH3PXD2B-203ENST00000519643 TRAPPC3LQ5T215 181 aa18.98■□□□□ 0.63
SH3PXD2B-203ENST00000519643 NBPF10Q6P3W6 841 aaKnown RBP18.98■□□□□ 0.63
SH3PXD2B-203ENST00000519643 DNAJC10Q8IXB1 793 aa18.98■□□□□ 0.63
SH3PXD2B-203ENST00000519643 NLGN1Q8N2Q7 840 aa18.98■□□□□ 0.63
SH3PXD2B-203ENST00000519643 NBPF15Q8N660 670 aa18.98■□□□□ 0.63
SH3PXD2B-203ENST00000519643 XAGE3Q8WTP9 111 aa18.98■□□□□ 0.63
SH3PXD2B-203ENST00000519643 AIMP1Q12904 312 aaKnown RBP18.97■□□□□ 0.63
SH3PXD2B-203ENST00000519643 HDAC1Q13547 482 aaPredicted RBP18.97■□□□□ 0.63
SH3PXD2B-203ENST00000519643 ARHGAP27Q6ZUM4 889 aa18.97■□□□□ 0.63
SH3PXD2B-203ENST00000519643 COPS6Q7L5N1 327 aa18.97■□□□□ 0.63
SH3PXD2B-203ENST00000519643 ARHGEF1Q92888 912 aaKnown RBP18.97■□□□□ 0.63
SH3PXD2B-203ENST00000519643 MEIS3Q99687 375 aa18.97■□□□□ 0.63
SH3PXD2B-203ENST00000519643 RTCBQ9Y3I0 505 aaKnown RBP18.97■□□□□ 0.63
SH3PXD2B-203ENST00000519643 A1BGP04217 495 aa18.96■□□□□ 0.63
SH3PXD2B-203ENST00000519643 GYS1P13807 737 aa18.96■□□□□ 0.63
SH3PXD2B-203ENST00000519643 PIP4K2AP48426 406 aaPredicted RBP18.96■□□□□ 0.63
SH3PXD2B-203ENST00000519643 BEND3Q5T5X7 828 aa18.96■□□□□ 0.63
SH3PXD2B-203ENST00000519643 SRCIN1Q9C0H9 1055 aa18.96■□□□□ 0.63
SH3PXD2B-203ENST00000519643 C1orf115Q9H7X2 142 aa18.96■□□□□ 0.63
SH3PXD2B-203ENST00000519643 MAP3K2Q9Y2U5 619 aa18.96■□□□□ 0.63
SH3PXD2B-203ENST00000519643 WDR90Q96KV7 1748 aa18.96■□□□□ 0.63
SH3PXD2B-203ENST00000519643 STARD3NLO95772 234 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms