RNA–Protein interactions for RNA: ENST00000519363.1

PABPC1-210, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-210ENST00000519363 METTL22Q9BUU2 404 aaPredicted RBP18.79■□□□□ 0.6
PABPC1-210ENST00000519363 RWDD1Q9H446 243 aaPredicted RBP18.79■□□□□ 0.6
PABPC1-210ENST00000519363 RGPD3A6NKT7 1758 aaPredicted RBP18.78■□□□□ 0.6
PABPC1-210ENST00000519363 RGPD4Q7Z3J3 1758 aa18.78■□□□□ 0.6
PABPC1-210ENST00000519363 NEXNQ0ZGT2 675 aa18.78■□□□□ 0.6
PABPC1-210ENST00000519363 PTF1AQ7RTS3 328 aa18.78■□□□□ 0.6
PABPC1-210ENST00000519363 CCDC87Q9NVE4 849 aa18.78■□□□□ 0.6
PABPC1-210ENST00000519363 ZBTB1Q9Y2K1 713 aa18.78■□□□□ 0.6
PABPC1-210ENST00000519363 EP400Q96L91 3159 aa18.78■□□□□ 0.6
PABPC1-210ENST00000519363 CNTNAP4Q9C0A0 1308 aa18.77■□□□□ 0.6
PABPC1-210ENST00000519363 NUP98P52948 1817 aa18.77■□□□□ 0.6
PABPC1-210ENST00000519363 USP44Q9H0E7 712 aa18.77■□□□□ 0.6
PABPC1-210ENST00000519363 TNS1Q9HBL0 1735 aaKnown RBP18.77■□□□□ 0.59
PABPC1-210ENST00000519363 IGHDP01880 384 aa18.76■□□□□ 0.59
PABPC1-210ENST00000519363 GNAI2P04899 355 aa18.76■□□□□ 0.59
PABPC1-210ENST00000519363 CRKLP46109 303 aaKnown RBP18.76■□□□□ 0.59
PABPC1-210ENST00000519363 INTS5Q6P9B9 1019 aaKnown RBP18.76■□□□□ 0.59
PABPC1-210ENST00000519363 TTLL7Q6ZT98 887 aa18.76■□□□□ 0.59
PABPC1-210ENST00000519363 PELP1Q8IZL8 1130 aaKnown RBP18.76■□□□□ 0.59
PABPC1-210ENST00000519363 UTYO14607 1347 aa18.75■□□□□ 0.59
PABPC1-210ENST00000519363 C4BP0C0L5 1744 aa18.75■□□□□ 0.59
PABPC1-210ENST00000519363 IGKV5-2P06315 115 aa18.75■□□□□ 0.59
PABPC1-210ENST00000519363 POTEAQ6S8J7 498 aa18.75■□□□□ 0.59
PABPC1-210ENST00000519363 KIF6Q6ZMV9 814 aa18.75■□□□□ 0.59
PABPC1-210ENST00000519363 RPAP2Q8IXW5 612 aaPredicted RBP18.75■□□□□ 0.59
PABPC1-210ENST00000519363 ANKRD44Q8N8A2 993 aa18.75■□□□□ 0.59
PABPC1-210ENST00000519363 C1orf115Q9H7X2 142 aa18.75■□□□□ 0.59
PABPC1-210ENST00000519363 SCN7AQ01118 1682 aa18.75■□□□□ 0.59
PABPC1-210ENST00000519363 NEURL1BA8MQ27 555 aa18.74■□□□□ 0.59
PABPC1-210ENST00000519363 UBTFL1P0CB47 393 aaPredicted RBP18.74■□□□□ 0.59
PABPC1-210ENST00000519363 EIF5P55010 431 aaKnown RBP18.74■□□□□ 0.59
PABPC1-210ENST00000519363 CEP85Q6P2H3 762 aa18.74■□□□□ 0.59
PABPC1-210ENST00000519363 HDAC5Q9UQL6 1122 aa18.74■□□□□ 0.59
PABPC1-210ENST00000519363 MAP3K15Q6ZN16 1313 aa18.74■□□□□ 0.59
PABPC1-210ENST00000519363 RC3H1Q5TC82 1133 aaKnown RBP18.73■□□□□ 0.59
PABPC1-210ENST00000519363 LINC00116Q8NCU8 138 aa18.73■□□□□ 0.59
PABPC1-210ENST00000519363 MYD88Q99836 296 aa18.73■□□□□ 0.59
PABPC1-210ENST00000519363 COL15A1P39059 1388 aa18.72■□□□□ 0.59
PABPC1-210ENST00000519363 CWF19L2Q2TBE0 894 aaKnown RBP18.72■□□□□ 0.59
PABPC1-210ENST00000519363 SIRT2Q8IXJ6 389 aa18.72■□□□□ 0.59
PABPC1-210ENST00000519363 SMC5Q8IY18 1101 aa18.72■□□□□ 0.59
PABPC1-210ENST00000519363 CCNL1Q9UK58 526 aaPredicted RBP18.72■□□□□ 0.59
PABPC1-210ENST00000519363 ERVV-1B6SEH8 477 aa18.71■□□□□ 0.59
PABPC1-210ENST00000519363 GRM8O00222 908 aa18.71■□□□□ 0.59
PABPC1-210ENST00000519363 GCKRQ14397 625 aa18.71■□□□□ 0.59
PABPC1-210ENST00000519363 TRIM28Q13263 835 aaKnown RBP18.7■□□□□ 0.58
PABPC1-210ENST00000519363 HSP90AB3PQ58FF7 597 aa18.7■□□□□ 0.58
PABPC1-210ENST00000519363 UBR3Q6ZT12 1888 aa18.7■□□□□ 0.58
PABPC1-210ENST00000519363 NPM2Q86SE8 214 aaKnown RBP18.7■□□□□ 0.58
PABPC1-210ENST00000519363 ZBTB3Q9H5J0 574 aa18.7■□□□□ 0.58
PABPC1-210ENST00000519363 C9orf78Q9NZ63 289 aaPredicted RBP18.7■□□□□ 0.58
PABPC1-210ENST00000519363 LRRFIP2Q9Y608 721 aaKnown RBP18.7■□□□□ 0.58
PABPC1-210ENST00000519363 C4AP0C0L4 1744 aa18.69■□□□□ 0.58
PABPC1-210ENST00000519363 RGL2O15211 777 aa18.69■□□□□ 0.58
PABPC1-210ENST00000519363 HMMRO75330 724 aa18.69■□□□□ 0.58
PABPC1-210ENST00000519363 TRIM37O94972 964 aa18.69■□□□□ 0.58
PABPC1-210ENST00000519363 NBPF7P0C2Y1 421 aaPredicted RBP18.69■□□□□ 0.58
PABPC1-210ENST00000519363 HMGB2P26583 209 aaKnown RBP18.69■□□□□ 0.58
PABPC1-210ENST00000519363 SLC27A3Q5K4L6 730 aa18.69■□□□□ 0.58
PABPC1-210ENST00000519363 GIGYF2Q6Y7W6 1299 aaKnown RBP18.69■□□□□ 0.58
PABPC1-210ENST00000519363 GCC1Q96CN9 775 aa18.69■□□□□ 0.58
PABPC1-210ENST00000519363 ISCA1Q9BUE6 129 aa18.69■□□□□ 0.58
PABPC1-210ENST00000519363 ZNF330Q9Y3S2 320 aaPredicted RBP18.69■□□□□ 0.58
PABPC1-210ENST00000519363 A0A087WZG4 1122 aa18.68■□□□□ 0.58
PABPC1-210ENST00000519363 TCIRG1Q13488 830 aa18.68■□□□□ 0.58
PABPC1-210ENST00000519363 MTX1Q13505 466 aa18.68■□□□□ 0.58
PABPC1-210ENST00000519363 DZIP3Q86Y13 1208 aaKnown RBP18.68■□□□□ 0.58
PABPC1-210ENST00000519363 CCDC191Q8NCU4 936 aa18.68■□□□□ 0.58
PABPC1-210ENST00000519363 CWC25Q9NXE8 425 aaPredicted RBP18.67■□□□□ 0.58
PABPC1-210ENST00000519363 ATP8B2P98198 1209 aa18.66■□□□□ 0.58
PABPC1-210ENST00000519363 ATP5J2-PTCD1G3V325 749 aa18.65■□□□□ 0.58
PABPC1-210ENST00000519363 RPS6KA4O75676 772 aa18.65■□□□□ 0.58
PABPC1-210ENST00000519363 DCTPP1Q9H773 170 aa18.65■□□□□ 0.58
PABPC1-210ENST00000519363 LAMB2P55268 1798 aa18.65■□□□□ 0.58
PABPC1-210ENST00000519363 MYH3P11055 1940 aa18.64■□□□□ 0.58
PABPC1-210ENST00000519363 COL24A1Q17RW2 1714 aa18.64■□□□□ 0.57
PABPC1-210ENST00000519363 PLSCR1O15162 318 aa18.64■□□□□ 0.57
PABPC1-210ENST00000519363 CAMTA2O94983 1202 aa18.64■□□□□ 0.57
PABPC1-210ENST00000519363 CASP7P55210 303 aa18.64■□□□□ 0.57
PABPC1-210ENST00000519363 SSH3Q8TE77 659 aa18.64■□□□□ 0.57
PABPC1-210ENST00000519363 H7C1W4 665 aa18.63■□□□□ 0.57
PABPC1-210ENST00000519363 KCNQ4P56696 695 aa18.63■□□□□ 0.57
PABPC1-210ENST00000519363 POLA2Q14181 598 aa18.63■□□□□ 0.57
PABPC1-210ENST00000519363 HLFQ16534 295 aa18.63■□□□□ 0.57
PABPC1-210ENST00000519363 SUCLG2Q96I99 432 aa18.63■□□□□ 0.57
PABPC1-210ENST00000519363 PDZRN3Q9UPQ7 1066 aa18.63■□□□□ 0.57
PABPC1-210ENST00000519363 TBC1D2BQ9UPU7 963 aa18.63■□□□□ 0.57
PABPC1-210ENST00000519363 NUCB1Q02818 461 aa18.62■□□□□ 0.57
PABPC1-210ENST00000519363 KAZALD1Q96I82 304 aa18.62■□□□□ 0.57
PABPC1-210ENST00000519363 LRRC4BQ9NT99 713 aa18.62■□□□□ 0.57
PABPC1-210ENST00000519363 PNMA6EA0A0J9YXQ4 647 aa18.61■□□□□ 0.57
PABPC1-210ENST00000519363 GNPATO15228 680 aa18.61■□□□□ 0.57
PABPC1-210ENST00000519363 CLEC4GQ6UXB4 293 aa18.61■□□□□ 0.57
PABPC1-210ENST00000519363 UBE3BQ7Z3V4 1068 aa18.61■□□□□ 0.57
PABPC1-210ENST00000519363 PPP1R42Q7Z4L9 355 aa18.61■□□□□ 0.57
PABPC1-210ENST00000519363 ZNF34Q8IZ26 560 aa18.61■□□□□ 0.57
PABPC1-210ENST00000519363 ZNF652Q9Y2D9 606 aa18.61■□□□□ 0.57
PABPC1-210ENST00000519363 CDHR2Q9BYE9 1310 aa18.6■□□□□ 0.57
PABPC1-210ENST00000519363 PCCAP05165 728 aaPredicted RBP18.6■□□□□ 0.57
PABPC1-210ENST00000519363 ADRA2BP18089 450 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms