RNA–Protein interactions for RNA: ENST00000519060.6

MSR1-210, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 5

Gene MSR1, Length 1,009 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-210ENST00000519060 GNPATO15228 680 aa13.01□□□□□ -0.33
MSR1-210ENST00000519060 HMGB2P26583 209 aaKnown RBP13.01□□□□□ -0.33
MSR1-210ENST00000519060 AMIGO3Q86WK7 504 aa13.01□□□□□ -0.33
MSR1-210ENST00000519060 CARD14Q9BXL6 1004 aa13.01□□□□□ -0.33
MSR1-210ENST00000519060 RTL1A6NKG5 1358 aa13.01□□□□□ -0.33
MSR1-210ENST00000519060 INSRP06213 1382 aa13.01□□□□□ -0.33
MSR1-210ENST00000519060 FAM208AQ9UK61 1670 aaKnown RBP13.01□□□□□ -0.33
MSR1-210ENST00000519060 COL24A1Q17RW2 1714 aa13.01□□□□□ -0.33
MSR1-210ENST00000519060 RGPD2P0DJD1 1756 aa13.01□□□□□ -0.33
MSR1-210ENST00000519060 QSER1Q2KHR3 1735 aa13□□□□□ -0.33
MSR1-210ENST00000519060 PCDH11XQ9BZA7 1347 aa13□□□□□ -0.33
MSR1-210ENST00000519060 PCDH11YQ9BZA8 1340 aa13□□□□□ -0.33
MSR1-210ENST00000519060 ADGRD1Q6QNK2 874 aa13□□□□□ -0.33
MSR1-210ENST00000519060 PIGBQ92521 554 aa13□□□□□ -0.33
MSR1-210ENST00000519060 GOLGB1Q14789 3259 aaKnown RBP13□□□□□ -0.33
MSR1-210ENST00000519060 LY75O60449 1722 aa12.99□□□□□ -0.33
MSR1-210ENST00000519060 PALLDQ8WX93 1383 aa12.99□□□□□ -0.33
MSR1-210ENST00000519060 PADI6Q6TGC4 694 aa12.99□□□□□ -0.33
MSR1-210ENST00000519060 TTC13Q8NBP0 860 aa12.99□□□□□ -0.33
MSR1-210ENST00000519060 SMARCC1Q92922 1105 aaPredicted RBP12.99□□□□□ -0.33
MSR1-210ENST00000519060 TSKSQ9UJT2 592 aa12.99□□□□□ -0.33
MSR1-210ENST00000519060 EMILIN1Q9Y6C2 1016 aa12.99□□□□□ -0.33
MSR1-210ENST00000519060 TUBGCP6Q96RT7 1819 aa12.98□□□□□ -0.33
MSR1-210ENST00000519060 FAM198AQ9UFP1 575 aa12.98□□□□□ -0.33
MSR1-210ENST00000519060 DOT1LQ8TEK3 1739 aa12.98□□□□□ -0.33
MSR1-210ENST00000519060 SMG6Q86US8 1419 aaKnown RBP12.97□□□□□ -0.33
MSR1-210ENST00000519060 SHANK3Q9BYB0 1731 aa12.97□□□□□ -0.33
MSR1-210ENST00000519060 PPM1GO15355 546 aaPredicted RBP12.97□□□□□ -0.33
MSR1-210ENST00000519060 PACS2Q86VP3 889 aa12.97□□□□□ -0.33
MSR1-210ENST00000519060 AK7Q96M32 723 aa12.97□□□□□ -0.33
MSR1-210ENST00000519060 KIAA1468Q9P260 1216 aa12.97□□□□□ -0.33
MSR1-210ENST00000519060 RABGEF1Q9UJ41 708 aa12.97□□□□□ -0.33
MSR1-210ENST00000519060 FLT4P35916 1363 aa12.96□□□□□ -0.33
MSR1-210ENST00000519060 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.96□□□□□ -0.33
MSR1-210ENST00000519060 ZMYND10O75800 440 aa12.96□□□□□ -0.33
MSR1-210ENST00000519060 FECHP22830 423 aa12.96□□□□□ -0.33
MSR1-210ENST00000519060 CDCA8Q53HL2 280 aa12.96□□□□□ -0.33
MSR1-210ENST00000519060 KIF24Q5T7B8 1368 aa12.95□□□□□ -0.34
MSR1-210ENST00000519060 LOC102724428A0A0B4J2F2 783 aa12.95□□□□□ -0.34
MSR1-210ENST00000519060 SIK1P57059 783 aa12.95□□□□□ -0.34
MSR1-210ENST00000519060 LINC00116Q8NCU8 138 aa12.95□□□□□ -0.34
MSR1-210ENST00000519060 EYA1Q99502 592 aa12.95□□□□□ -0.34
MSR1-210ENST00000519060 WWC3Q9ULE0 1092 aa12.95□□□□□ -0.34
MSR1-210ENST00000519060 ASAP1Q9ULH1 1129 aa12.95□□□□□ -0.34
MSR1-210ENST00000519060 SPG7Q9UQ90 795 aa12.95□□□□□ -0.34
MSR1-210ENST00000519060 WASHC2AQ641Q2 1341 aa12.94□□□□□ -0.34
MSR1-210ENST00000519060 HRO43593 1189 aa12.94□□□□□ -0.34
MSR1-210ENST00000519060 GPBP1L1Q9HC44 474 aaPredicted RBP12.94□□□□□ -0.34
MSR1-210ENST00000519060 ATP10DQ9P241 1426 aa12.94□□□□□ -0.34
MSR1-210ENST00000519060 BHMG1C9JSJ3 638 aaPredicted RBP12.93□□□□□ -0.34
MSR1-210ENST00000519060 SSFA2P28290 1259 aa12.93□□□□□ -0.34
MSR1-210ENST00000519060 ITPK1Q13572 414 aa12.93□□□□□ -0.34
MSR1-210ENST00000519060 ZNF526Q8TF50 670 aaPredicted RBP12.93□□□□□ -0.34
MSR1-210ENST00000519060 IGSF1Q8N6C5 1336 aa12.92□□□□□ -0.34
MSR1-210ENST00000519060 ATP6V1AP38606 617 aa12.92□□□□□ -0.34
MSR1-210ENST00000519060 IFFO2Q5TF58 517 aa12.92□□□□□ -0.34
MSR1-210ENST00000519060 ATG3Q9NT62 314 aa12.92□□□□□ -0.34
MSR1-210ENST00000519060 TMOD3Q9NYL9 352 aa12.92□□□□□ -0.34
MSR1-210ENST00000519060 POLKQ9UBT6 870 aa12.92□□□□□ -0.34
MSR1-210ENST00000519060 PHKG2P15735 406 aa12.91□□□□□ -0.34
MSR1-210ENST00000519060 IFNL2Q8IZJ0 200 aa12.91□□□□□ -0.34
MSR1-210ENST00000519060 CEP350Q5VT06 3117 aa12.91□□□□□ -0.34
MSR1-210ENST00000519060 NBPF26B4DH59 902 aa12.9□□□□□ -0.34
MSR1-210ENST00000519060 TATDN2Q93075 761 aa12.9□□□□□ -0.34
MSR1-210ENST00000519060 NBPF3Q9H094 633 aa12.9□□□□□ -0.34
MSR1-210ENST00000519060 C5P01031 1676 aa12.89□□□□□ -0.35
MSR1-210ENST00000519060 NCAPD2Q15021 1401 aa12.89□□□□□ -0.35
MSR1-210ENST00000519060 NSD3Q9BZ95 1437 aa12.89□□□□□ -0.35
MSR1-210ENST00000519060 MMP10P09238 476 aa12.89□□□□□ -0.35
MSR1-210ENST00000519060 HSPA6P17066 643 aa12.89□□□□□ -0.35
MSR1-210ENST00000519060 MAP2K5Q13163 448 aa12.89□□□□□ -0.35
MSR1-210ENST00000519060 SLC4A9Q96Q91 983 aa12.89□□□□□ -0.35
MSR1-210ENST00000519060 PNMA3Q9UL41 463 aa12.89□□□□□ -0.35
MSR1-210ENST00000519060 ADCY9O60503 1353 aa12.89□□□□□ -0.35
MSR1-210ENST00000519060 C4BP0C0L5 1744 aa12.88□□□□□ -0.35
MSR1-210ENST00000519060 TAF1LQ8IZX4 1826 aa12.88□□□□□ -0.35
MSR1-210ENST00000519060 C3orf80F5H4A9 247 aa12.88□□□□□ -0.35
MSR1-210ENST00000519060 TNNT2P45379 298 aaPredicted RBP12.88□□□□□ -0.35
MSR1-210ENST00000519060 EIF4A2Q14240 407 aaKnown RBP12.88□□□□□ -0.35
MSR1-210ENST00000519060 TRAPPC3LQ5T215 181 aa12.88□□□□□ -0.35
MSR1-210ENST00000519060 NUDT18Q6ZVK8 323 aa12.88□□□□□ -0.35
MSR1-210ENST00000519060 KRI1Q8N9T8 703 aaKnown RBP12.88□□□□□ -0.35
MSR1-210ENST00000519060 ADGRG1Q9Y653 693 aa12.88□□□□□ -0.35
MSR1-210ENST00000519060 A0A0G2JLW4 131 aa12.87□□□□□ -0.35
MSR1-210ENST00000519060 TPRNQ4KMQ1 711 aa12.87□□□□□ -0.35
MSR1-210ENST00000519060 ITGB4P16144 1822 aa12.87□□□□□ -0.35
MSR1-210ENST00000519060 ERVV-2B6SEH9 535 aa12.86□□□□□ -0.35
MSR1-210ENST00000519060 IRF6O14896 467 aa12.86□□□□□ -0.35
MSR1-210ENST00000519060 TGFB2P61812 414 aa12.86□□□□□ -0.35
MSR1-210ENST00000519060 FAM161AQ3B820 660 aa12.86□□□□□ -0.35
MSR1-210ENST00000519060 RC3H1Q5TC82 1133 aaKnown RBP12.86□□□□□ -0.35
MSR1-210ENST00000519060 NLGN1Q8N2Q7 840 aa12.86□□□□□ -0.35
MSR1-210ENST00000519060 MRPL50Q8N5N7 158 aaKnown RBP12.86□□□□□ -0.35
MSR1-210ENST00000519060 RTCBQ9Y3I0 505 aaKnown RBP12.86□□□□□ -0.35
MSR1-210ENST00000519060 TOGARAM1Q9Y4F4 1720 aa12.85□□□□□ -0.35
MSR1-210ENST00000519060 SMAPO00193 183 aa12.85□□□□□ -0.35
MSR1-210ENST00000519060 OATP04181 439 aa12.85□□□□□ -0.35
MSR1-210ENST00000519060 LAPTM4BQ86VI4 370 aa12.85□□□□□ -0.35
MSR1-210ENST00000519060 RBM46Q8TBY0 533 aaKnown RBP12.85□□□□□ -0.35
MSR1-210ENST00000519060 POLR3GLQ9BT43 218 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms