RNA–Protein interactions for RNA: ENST00000518910.5

CTNNA1-211, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-211ENST00000518910 CACNA1FO60840 1977 aa15.82■□□□□ 0.12
CTNNA1-211ENST00000518910 CAMTA2O94983 1202 aa15.82■□□□□ 0.12
CTNNA1-211ENST00000518910 HLFQ16534 295 aa15.82■□□□□ 0.12
CTNNA1-211ENST00000518910 TBC1D9BQ66K14 1250 aa15.82■□□□□ 0.12
CTNNA1-211ENST00000518910 PELP1Q8IZL8 1130 aaKnown RBP15.82■□□□□ 0.12
CTNNA1-211ENST00000518910 SGIP1Q9BQI5 828 aa15.82■□□□□ 0.12
CTNNA1-211ENST00000518910 MYH16Q9H6N6 1097 aa15.82■□□□□ 0.12
CTNNA1-211ENST00000518910 NPHP1O15259 732 aa15.81■□□□□ 0.12
CTNNA1-211ENST00000518910 GPTP24298 496 aa15.81■□□□□ 0.12
CTNNA1-211ENST00000518910 DDR1Q08345 913 aa15.81■□□□□ 0.12
CTNNA1-211ENST00000518910 NFIXQ14938 502 aa15.81■□□□□ 0.12
CTNNA1-211ENST00000518910 PDIA6Q15084 440 aa15.81■□□□□ 0.12
CTNNA1-211ENST00000518910 ZNF521Q96K83 1311 aa15.81■□□□□ 0.12
CTNNA1-211ENST00000518910 PARP3Q9Y6F1 533 aa15.81■□□□□ 0.12
CTNNA1-211ENST00000518910 COPS6Q7L5N1 327 aa15.8■□□□□ 0.12
CTNNA1-211ENST00000518910 NLGN1Q8N2Q7 840 aa15.8■□□□□ 0.12
CTNNA1-211ENST00000518910 PHAXQ9H814 394 aaKnown RBP15.8■□□□□ 0.12
CTNNA1-211ENST00000518910 ANKRD31Q8N7Z5 1873 aa15.8■□□□□ 0.12
CTNNA1-211ENST00000518910 NLGN2Q8NFZ4 835 aa15.79■□□□□ 0.12
CTNNA1-211ENST00000518910 DDX21Q9NR30 783 aaKnown RBP eCLIP15.79■□□□□ 0.12
CTNNA1-211ENST00000518910 BCL2L13Q9BXK5 485 aa15.78■□□□□ 0.12
CTNNA1-211ENST00000518910 DBF4Q9UBU7 674 aaPredicted RBP15.78■□□□□ 0.12
CTNNA1-211ENST00000518910 NIP7Q9Y221 180 aaKnown RBP eCLIP15.78■□□□□ 0.12
CTNNA1-211ENST00000518910 MAP3K15Q6ZN16 1313 aa15.77■□□□□ 0.12
CTNNA1-211ENST00000518910 E9PSI1 815 aa15.77■□□□□ 0.12
CTNNA1-211ENST00000518910 SLFN5Q08AF3 891 aa15.77■□□□□ 0.12
CTNNA1-211ENST00000518910 CCDC30Q5VVM6 783 aa15.77■□□□□ 0.12
CTNNA1-211ENST00000518910 STK31Q9BXU1 1019 aa15.77■□□□□ 0.12
CTNNA1-211ENST00000518910 KIF13BQ9NQT8 1826 aa15.77■□□□□ 0.11
CTNNA1-211ENST00000518910 ERBB4Q15303 1308 aa15.76■□□□□ 0.11
CTNNA1-211ENST00000518910 POLRMTO00411 1230 aaKnown RBP15.76■□□□□ 0.11
CTNNA1-211ENST00000518910 SERPINB2P05120 415 aa15.76■□□□□ 0.11
CTNNA1-211ENST00000518910 HOXB7P09629 217 aa15.76■□□□□ 0.11
CTNNA1-211ENST00000518910 G2E3Q7L622 706 aa15.76■□□□□ 0.11
CTNNA1-211ENST00000518910 ZNF652Q9Y2D9 606 aa15.76■□□□□ 0.11
CTNNA1-211ENST00000518910 CARMIL3Q8ND23 1372 aa15.75■□□□□ 0.11
CTNNA1-211ENST00000518910 COL11A2P13942 1736 aaPredicted RBP15.75■□□□□ 0.11
CTNNA1-211ENST00000518910 KIAA1551Q9HCM1 1747 aa15.75■□□□□ 0.11
CTNNA1-211ENST00000518910 NCBP3Q53F19 620 aaKnown RBP15.75■□□□□ 0.11
CTNNA1-211ENST00000518910 LRP10Q7Z4F1 713 aa15.75■□□□□ 0.11
CTNNA1-211ENST00000518910 SETDB2Q96T68 719 aa15.75■□□□□ 0.11
CTNNA1-211ENST00000518910 SYT17Q9BSW7 474 aa15.75■□□□□ 0.11
CTNNA1-211ENST00000518910 NRXN2Q9P2S2 1712 aa15.74■□□□□ 0.11
CTNNA1-211ENST00000518910 ATP5J2-PTCD1G3V325 749 aa15.74■□□□□ 0.11
CTNNA1-211ENST00000518910 VAMP4O75379 141 aa15.74■□□□□ 0.11
CTNNA1-211ENST00000518910 SLC4A2P04920 1241 aa15.74■□□□□ 0.11
CTNNA1-211ENST00000518910 TM4SF1P30408 202 aa15.74■□□□□ 0.11
CTNNA1-211ENST00000518910 RIC3Q7Z5B4 369 aa15.74■□□□□ 0.11
CTNNA1-211ENST00000518910 HYPKQ9NX55 129 aa15.74■□□□□ 0.11
CTNNA1-211ENST00000518910 TNRC6CQ9HCJ0 1690 aaKnown RBP15.73■□□□□ 0.11
CTNNA1-211ENST00000518910 RTL5Q5HYW3 569 aaPredicted RBP15.73■□□□□ 0.11
CTNNA1-211ENST00000518910 NBPF5PQ86XG9 351 aaPredicted RBP15.73■□□□□ 0.11
CTNNA1-211ENST00000518910 NUTM1Q86Y26 1132 aa15.73■□□□□ 0.11
CTNNA1-211ENST00000518910 TAF1P21675 1872 aa15.73■□□□□ 0.11
CTNNA1-211ENST00000518910 LAMB2P55268 1798 aa15.72■□□□□ 0.11
CTNNA1-211ENST00000518910 A0A0G2JLW4 131 aa15.72■□□□□ 0.11
CTNNA1-211ENST00000518910 GTF2E1P29083 439 aaPredicted RBP15.72■□□□□ 0.11
CTNNA1-211ENST00000518910 CHRNA5P30532 468 aa15.72■□□□□ 0.11
CTNNA1-211ENST00000518910 MYD88Q99836 296 aa15.72■□□□□ 0.11
CTNNA1-211ENST00000518910 BRCA1P38398 1863 aaKnown RBP15.71■□□□□ 0.11
CTNNA1-211ENST00000518910 UBN2Q6ZU65 1347 aa15.71■□□□□ 0.11
CTNNA1-211ENST00000518910 C10orf71Q711Q0 1435 aa15.71■□□□□ 0.11
CTNNA1-211ENST00000518910 CNBD1Q8NA66 436 aa15.71■□□□□ 0.11
CTNNA1-211ENST00000518910 JARID2Q92833 1246 aaPredicted RBP15.71■□□□□ 0.11
CTNNA1-211ENST00000518910 FKBP5Q13451 457 aaPredicted RBP15.7■□□□□ 0.1
CTNNA1-211ENST00000518910 PRR5LQ6MZQ0 368 aa15.7■□□□□ 0.1
CTNNA1-211ENST00000518910 GIGYF2Q6Y7W6 1299 aaKnown RBP15.7■□□□□ 0.1
CTNNA1-211ENST00000518910 ANKRD13DQ6ZTN6 518 aa15.7■□□□□ 0.1
CTNNA1-211ENST00000518910 MAP3K2Q9Y2U5 619 aa15.7■□□□□ 0.1
CTNNA1-211ENST00000518910 DLEC1Q9Y238 1755 aa15.7■□□□□ 0.1
CTNNA1-211ENST00000518910 ERVV-1B6SEH8 477 aa15.69■□□□□ 0.1
CTNNA1-211ENST00000518910 F6X3S4 739 aa15.69■□□□□ 0.1
CTNNA1-211ENST00000518910 DPEP1P16444 411 aa15.69■□□□□ 0.1
CTNNA1-211ENST00000518910 SUSD4Q5VX71 490 aa15.69■□□□□ 0.1
CTNNA1-211ENST00000518910 SYNE4Q8N205 404 aa15.69■□□□□ 0.1
CTNNA1-211ENST00000518910 PLBD2Q8NHP8 589 aa15.69■□□□□ 0.1
CTNNA1-211ENST00000518910 ZNF219Q9P2Y4 722 aaPredicted RBP15.69■□□□□ 0.1
CTNNA1-211ENST00000518910 PXDNLA1KZ92 1463 aa15.69■□□□□ 0.1
CTNNA1-211ENST00000518910 ZBED9Q6R2W3 1325 aa15.68■□□□□ 0.1
CTNNA1-211ENST00000518910 DDX60Q8IY21 1712 aaKnown RBP15.68■□□□□ 0.1
CTNNA1-211ENST00000518910 SPEF2Q9C093 1822 aa15.68■□□□□ 0.1
CTNNA1-211ENST00000518910 ABCC12Q96J65 1359 aa15.68■□□□□ 0.1
CTNNA1-211ENST00000518910 PI4KAP2A4QPH2 592 aa15.68■□□□□ 0.1
CTNNA1-211ENST00000518910 ST5P78524 1137 aa15.68■□□□□ 0.1
CTNNA1-211ENST00000518910 FLIIQ13045 1269 aa15.68■□□□□ 0.1
CTNNA1-211ENST00000518910 GPR162Q16538 588 aa15.68■□□□□ 0.1
CTNNA1-211ENST00000518910 ERFEQ4G0M1 354 aa15.68■□□□□ 0.1
CTNNA1-211ENST00000518910 PI4KAP1Q8N8J0 262 aa15.68■□□□□ 0.1
CTNNA1-211ENST00000518910 SMC4Q9NTJ3 1288 aa15.68■□□□□ 0.1
CTNNA1-211ENST00000518910 ATP10DQ9P241 1426 aa15.68■□□□□ 0.1
CTNNA1-211ENST00000518910 CCDC88AQ3V6T2 1871 aa15.67■□□□□ 0.1
CTNNA1-211ENST00000518910 DDX58O95786 925 aaKnown RBP15.67■□□□□ 0.1
CTNNA1-211ENST00000518910 CLEC4GQ6UXB4 293 aa15.67■□□□□ 0.1
CTNNA1-211ENST00000518910 C2CD5Q86YS7 1000 aa15.67■□□□□ 0.1
CTNNA1-211ENST00000518910 SSH1Q8WYL5 1049 aa15.67■□□□□ 0.1
CTNNA1-211ENST00000518910 CD2APQ9Y5K6 639 aa15.67■□□□□ 0.1
CTNNA1-211ENST00000518910 MYH3P11055 1940 aa15.66■□□□□ 0.1
CTNNA1-211ENST00000518910 ADCY9O60503 1353 aa15.66■□□□□ 0.1
CTNNA1-211ENST00000518910 TCIRG1Q13488 830 aa15.66■□□□□ 0.1
CTNNA1-211ENST00000518910 SLC4A10Q6U841 1118 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms