RNA–Protein interactions for RNA: ENST00000518711.1

SPIDR-208, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 621 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-208ENST00000518711 SAGE1Q9NXZ1 904 aa7.8□□□□□ -1.16
SPIDR-208ENST00000518711 UNC80Q8N2C7 3258 aa7.79□□□□□ -1.16
SPIDR-208ENST00000518711 ZPR1O75312 459 aa7.79□□□□□ -1.16
SPIDR-208ENST00000518711 FMR1Q06787 632 aaKnown RBP eCLIP7.79□□□□□ -1.16
SPIDR-208ENST00000518711 DDR1Q08345 913 aa7.79□□□□□ -1.16
SPIDR-208ENST00000518711 FKBP8Q14318 412 aa7.79□□□□□ -1.16
SPIDR-208ENST00000518711 TTLL6Q8N841 843 aa7.79□□□□□ -1.16
SPIDR-208ENST00000518711 RBM42Q9BTD8 480 aaKnown RBP7.79□□□□□ -1.16
SPIDR-208ENST00000518711 HACL1Q9UJ83 578 aa7.79□□□□□ -1.16
SPIDR-208ENST00000518711 STXBP5LQ9Y2K9 1186 aa7.79□□□□□ -1.16
SPIDR-208ENST00000518711 ANKRD26Q9UPS8 1709 aa7.78□□□□□ -1.16
SPIDR-208ENST00000518711 EPHX2P34913 555 aa7.78□□□□□ -1.16
SPIDR-208ENST00000518711 MTHFSP49914 203 aa7.78□□□□□ -1.16
SPIDR-208ENST00000518711 NOGQ13253 232 aa7.78□□□□□ -1.16
SPIDR-208ENST00000518711 EIF4A2Q14240 407 aaKnown RBP7.78□□□□□ -1.16
SPIDR-208ENST00000518711 INTS5Q6P9B9 1019 aaKnown RBP7.78□□□□□ -1.16
SPIDR-208ENST00000518711 ANKRD13DQ6ZTN6 518 aa7.78□□□□□ -1.16
SPIDR-208ENST00000518711 SAPCD2Q86UD0 394 aa7.78□□□□□ -1.16
SPIDR-208ENST00000518711 VSIG10Q8N0Z9 540 aa7.78□□□□□ -1.16
SPIDR-208ENST00000518711 HHIPL1Q96JK4 782 aa7.78□□□□□ -1.16
SPIDR-208ENST00000518711 ZIC5Q96T25 663 aa7.78□□□□□ -1.16
SPIDR-208ENST00000518711 NARFQ9UHQ1 456 aa7.78□□□□□ -1.16
SPIDR-208ENST00000518711 CCDC88AQ3V6T2 1871 aa7.78□□□□□ -1.16
SPIDR-208ENST00000518711 COL5A3P25940 1745 aaPredicted RBP7.78□□□□□ -1.16
SPIDR-208ENST00000518711 LTBP3Q9NS15 1303 aa7.78□□□□□ -1.16
SPIDR-208ENST00000518711 POTEFA5A3E0 1075 aa7.77□□□□□ -1.17
SPIDR-208ENST00000518711 PPM1GO15355 546 aaPredicted RBP7.77□□□□□ -1.17
SPIDR-208ENST00000518711 TRPA1O75762 1119 aa7.77□□□□□ -1.17
SPIDR-208ENST00000518711 SCN4AP35499 1836 aa7.77□□□□□ -1.17
SPIDR-208ENST00000518711 CEP290O15078 2479 aa7.76□□□□□ -1.17
SPIDR-208ENST00000518711 H0YIN7 160 aa7.76□□□□□ -1.17
SPIDR-208ENST00000518711 PPEF1O14829 653 aaPredicted RBP7.76□□□□□ -1.17
SPIDR-208ENST00000518711 C1orf141Q5JVX7 400 aa7.76□□□□□ -1.17
SPIDR-208ENST00000518711 SOGA3Q5TF21 947 aa7.76□□□□□ -1.17
SPIDR-208ENST00000518711 NFATC2IPQ8NCF5 419 aa7.76□□□□□ -1.17
SPIDR-208ENST00000518711 RNF186Q9NXI6 227 aa7.76□□□□□ -1.17
SPIDR-208ENST00000518711 TIMELESSQ9UNS1 1208 aa7.76□□□□□ -1.17
SPIDR-208ENST00000518711 ADAMTSL1Q8N6G6 1762 aa7.76□□□□□ -1.17
SPIDR-208ENST00000518711 SOS1Q07889 1333 aaPredicted RBP7.76□□□□□ -1.17
SPIDR-208ENST00000518711 KIF20BQ96Q89 1820 aa7.75□□□□□ -1.17
SPIDR-208ENST00000518711 A0A087WZG4 1122 aa7.75□□□□□ -1.17
SPIDR-208ENST00000518711 PTCD1O75127 700 aaKnown RBP7.75□□□□□ -1.17
SPIDR-208ENST00000518711 NFIXQ14938 502 aa7.75□□□□□ -1.17
SPIDR-208ENST00000518711 ZNF530Q6P9A1 599 aaPredicted RBP7.75□□□□□ -1.17
SPIDR-208ENST00000518711 FBXO46Q6PJ61 603 aaPredicted RBP7.75□□□□□ -1.17
SPIDR-208ENST00000518711 BRIP1Q9BX63 1249 aa7.75□□□□□ -1.17
SPIDR-208ENST00000518711 SRP68Q9UHB9 627 aaKnown RBP7.75□□□□□ -1.17
SPIDR-208ENST00000518711 HDAC9Q9UKV0 1011 aa7.75□□□□□ -1.17
SPIDR-208ENST00000518711 SYNGAP1Q96PV0 1343 aa7.75□□□□□ -1.17
SPIDR-208ENST00000518711 TRAF5O00463 557 aa7.74□□□□□ -1.17
SPIDR-208ENST00000518711 SOX1O00570 391 aaPredicted RBP7.74□□□□□ -1.17
SPIDR-208ENST00000518711 SERPINB2P05120 415 aa7.74□□□□□ -1.17
SPIDR-208ENST00000518711 CYP19A1P11511 503 aaPredicted RBP7.74□□□□□ -1.17
SPIDR-208ENST00000518711 PDE6BP35913 854 aa7.74□□□□□ -1.17
SPIDR-208ENST00000518711 USPL1Q5W0Q7 1092 aa7.74□□□□□ -1.17
SPIDR-208ENST00000518711 INTS3Q68E01 1043 aaKnown RBP7.74□□□□□ -1.17
SPIDR-208ENST00000518711 LRCH3Q96II8 777 aa7.74□□□□□ -1.17
SPIDR-208ENST00000518711 NRXN2Q9P2S2 1712 aa7.73□□□□□ -1.17
SPIDR-208ENST00000518711 RGL2O15211 777 aa7.73□□□□□ -1.17
SPIDR-208ENST00000518711 C2CD5Q86YS7 1000 aa7.73□□□□□ -1.17
SPIDR-208ENST00000518711 DEFB123Q8N688 67 aa7.73□□□□□ -1.17
SPIDR-208ENST00000518711 TEX13AQ9BXU3 409 aaPredicted RBP7.73□□□□□ -1.17
SPIDR-208ENST00000518711 SLC52A2Q9HAB3 445 aa7.73□□□□□ -1.17
SPIDR-208ENST00000518711 VCANP13611 3396 aa7.73□□□□□ -1.17
SPIDR-208ENST00000518711 DICER1Q9UPY3 1922 aaKnown RBP7.72□□□□□ -1.17
SPIDR-208ENST00000518711 TMEM265A0A087WTH1 108 aa7.72□□□□□ -1.17
SPIDR-208ENST00000518711 STARD3NLO95772 234 aa7.72□□□□□ -1.17
SPIDR-208ENST00000518711 EN2P19622 333 aaPredicted RBP7.72□□□□□ -1.17
SPIDR-208ENST00000518711 EIF5P55010 431 aaKnown RBP7.72□□□□□ -1.17
SPIDR-208ENST00000518711 MAP3K12Q12852 859 aa7.72□□□□□ -1.17
SPIDR-208ENST00000518711 STYK1Q6J9G0 422 aa7.72□□□□□ -1.17
SPIDR-208ENST00000518711 SYNE4Q8N205 404 aa7.72□□□□□ -1.17
SPIDR-208ENST00000518711 CNKSR1Q969H4 720 aa7.72□□□□□ -1.17
SPIDR-208ENST00000518711 BCL2L12Q9HB09 334 aa7.72□□□□□ -1.17
SPIDR-208ENST00000518711 RANBP2P49792 3224 aaKnown RBP7.72□□□□□ -1.17
SPIDR-208ENST00000518711 CELF2O95319 508 aaKnown RBP7.71□□□□□ -1.18
SPIDR-208ENST00000518711 DNAJC10Q8IXB1 793 aa7.71□□□□□ -1.18
SPIDR-208ENST00000518711 TAOK3Q9H2K8 898 aa7.71□□□□□ -1.18
SPIDR-208ENST00000518711 RNF123Q5XPI4 1314 aa7.71□□□□□ -1.18
SPIDR-208ENST00000518711 DLEC1Q9Y238 1755 aa7.71□□□□□ -1.18
SPIDR-208ENST00000518711 COL15A1P39059 1388 aa7.71□□□□□ -1.18
SPIDR-208ENST00000518711 KLRG2A4D1S0 409 aaPredicted RBP7.7□□□□□ -1.18
SPIDR-208ENST00000518711 CLEC4GQ6UXB4 293 aa7.7□□□□□ -1.18
SPIDR-208ENST00000518711 BICDL1Q6ZP65 573 aa7.7□□□□□ -1.18
SPIDR-208ENST00000518711 PRO3102Q9H379 93 aa7.7□□□□□ -1.18
SPIDR-208ENST00000518711 AFDNP55196 1824 aaKnown RBP7.7□□□□□ -1.18
SPIDR-208ENST00000518711 FER1L6Q2WGJ9 1857 aa7.7□□□□□ -1.18
SPIDR-208ENST00000518711 A0A1W2PPC1 479 aa7.69□□□□□ -1.18
SPIDR-208ENST00000518711 RNMTO43148 476 aaKnown RBP7.69□□□□□ -1.18
SPIDR-208ENST00000518711 SRGNP10124 158 aa7.69□□□□□ -1.18
SPIDR-208ENST00000518711 IL13P35225 146 aa7.69□□□□□ -1.18
SPIDR-208ENST00000518711 IL6STP40189 918 aaPredicted RBP7.69□□□□□ -1.18
SPIDR-208ENST00000518711 KIF23Q02241 960 aaPredicted RBP7.69□□□□□ -1.18
SPIDR-208ENST00000518711 GRIPAP1Q4V328 841 aa7.69□□□□□ -1.18
SPIDR-208ENST00000518711 SULT6B1Q6IMI4 303 aa7.69□□□□□ -1.18
SPIDR-208ENST00000518711 GPR153Q6NV75 609 aa7.69□□□□□ -1.18
SPIDR-208ENST00000518711 C7orf43Q8WVR3 580 aa7.69□□□□□ -1.18
SPIDR-208ENST00000518711 MASTLQ96GX5 879 aa7.69□□□□□ -1.18
SPIDR-208ENST00000518711 MTMR10Q9NXD2 777 aa7.69□□□□□ -1.18
SPIDR-208ENST00000518711 CARMIL3Q8ND23 1372 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms