RNA–Protein interactions for RNA: ENST00000518678.1

TRAM1-202, Transcript of translocation associated membrane protein 1, humanhuman

TSL 4

Gene TRAM1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-202ENST00000518678 MRPL50Q8N5N7 158 aaKnown RBP22.71■■□□□ 1.23
TRAM1-202ENST00000518678 NLGN2Q8NFZ4 835 aa22.71■■□□□ 1.23
TRAM1-202ENST00000518678 SLC16A10Q8TF71 515 aa22.71■■□□□ 1.23
TRAM1-202ENST00000518678 XAGE3Q8WTP9 111 aa22.71■■□□□ 1.23
TRAM1-202ENST00000518678 PHAXQ9H814 394 aaKnown RBP22.71■■□□□ 1.23
TRAM1-202ENST00000518678 TTLL7Q6ZT98 887 aa22.7■■□□□ 1.22
TRAM1-202ENST00000518678 NARFQ9UHQ1 456 aa22.7■■□□□ 1.22
TRAM1-202ENST00000518678 TBC1D2BQ9UPU7 963 aa22.7■■□□□ 1.22
TRAM1-202ENST00000518678 BCORQ6W2J9 1755 aa22.7■■□□□ 1.22
TRAM1-202ENST00000518678 SCN7AQ01118 1682 aa22.69■■□□□ 1.22
TRAM1-202ENST00000518678 USP42Q9H9J4 1324 aaKnown RBP22.69■■□□□ 1.22
TRAM1-202ENST00000518678 YY1P25490 414 aa22.69■■□□□ 1.22
TRAM1-202ENST00000518678 AIMP1Q12904 312 aaKnown RBP22.69■■□□□ 1.22
TRAM1-202ENST00000518678 G2E3Q7L622 706 aa22.69■■□□□ 1.22
TRAM1-202ENST00000518678 SMC4Q9NTJ3 1288 aa22.69■■□□□ 1.22
TRAM1-202ENST00000518678 ZPR1O75312 459 aa22.68■■□□□ 1.22
TRAM1-202ENST00000518678 CAMTA2O94983 1202 aa22.68■■□□□ 1.22
TRAM1-202ENST00000518678 KIF6Q6ZMV9 814 aa22.68■■□□□ 1.22
TRAM1-202ENST00000518678 BCL2L13Q9BXK5 485 aa22.68■■□□□ 1.22
TRAM1-202ENST00000518678 SRP68Q9UHB9 627 aaKnown RBP22.68■■□□□ 1.22
TRAM1-202ENST00000518678 MAP3K15Q6ZN16 1313 aa22.67■■□□□ 1.22
TRAM1-202ENST00000518678 POLD1P28340 1107 aa22.67■■□□□ 1.22
TRAM1-202ENST00000518678 BRPF1P55201 1214 aaPredicted RBP22.67■■□□□ 1.22
TRAM1-202ENST00000518678 FLIIQ13045 1269 aa22.67■■□□□ 1.22
TRAM1-202ENST00000518678 ERVV-1B6SEH8 477 aa22.66■■□□□ 1.22
TRAM1-202ENST00000518678 USPL1Q5W0Q7 1092 aa22.66■■□□□ 1.22
TRAM1-202ENST00000518678 RGL2O15211 777 aa22.65■■□□□ 1.22
TRAM1-202ENST00000518678 BCL2L12Q9HB09 334 aa22.65■■□□□ 1.22
TRAM1-202ENST00000518678 DDX58O95786 925 aaKnown RBP22.64■■□□□ 1.21
TRAM1-202ENST00000518678 GYS1P13807 737 aa22.64■■□□□ 1.21
TRAM1-202ENST00000518678 ANKRD13DQ6ZTN6 518 aa22.64■■□□□ 1.21
TRAM1-202ENST00000518678 PLBD2Q8NHP8 589 aa22.64■■□□□ 1.21
TRAM1-202ENST00000518678 ZBTB3Q9H5J0 574 aa22.64■■□□□ 1.21
TRAM1-202ENST00000518678 RCAN3Q9UKA8 241 aa22.64■■□□□ 1.21
TRAM1-202ENST00000518678 CHD4Q14839 1912 aa22.63■■□□□ 1.21
TRAM1-202ENST00000518678 BCAR3O75815 825 aa22.63■■□□□ 1.21
TRAM1-202ENST00000518678 FKBP5Q13451 457 aaPredicted RBP22.62■■□□□ 1.21
TRAM1-202ENST00000518678 HLFQ16534 295 aa22.62■■□□□ 1.21
TRAM1-202ENST00000518678 CLEC4GQ6UXB4 293 aa22.62■■□□□ 1.21
TRAM1-202ENST00000518678 KSR2Q6VAB6 950 aa22.62■■□□□ 1.21
TRAM1-202ENST00000518678 ZNF652Q9Y2D9 606 aa22.62■■□□□ 1.21
TRAM1-202ENST00000518678 ARFGEF2Q9Y6D5 1785 aa22.62■■□□□ 1.21
TRAM1-202ENST00000518678 NUP98P52948 1817 aa22.61■■□□□ 1.21
TRAM1-202ENST00000518678 PTPRCP08575 1304 aa22.61■■□□□ 1.21
TRAM1-202ENST00000518678 KIF16BQ96L93 1317 aa22.61■■□□□ 1.21
TRAM1-202ENST00000518678 DCAF8L1A6NGE4 600 aa22.61■■□□□ 1.21
TRAM1-202ENST00000518678 GIGYF2Q6Y7W6 1299 aaKnown RBP22.61■■□□□ 1.21
TRAM1-202ENST00000518678 RIC3Q7Z5B4 369 aa22.61■■□□□ 1.21
TRAM1-202ENST00000518678 ADCY9O60503 1353 aa22.61■■□□□ 1.21
TRAM1-202ENST00000518678 PI4KAP2A4QPH2 592 aa22.6■■□□□ 1.21
TRAM1-202ENST00000518678 FKBP8Q14318 412 aa22.6■■□□□ 1.21
TRAM1-202ENST00000518678 PELP1Q8IZL8 1130 aaKnown RBP22.6■■□□□ 1.21
TRAM1-202ENST00000518678 NLGN1Q8N2Q7 840 aa22.6■■□□□ 1.21
TRAM1-202ENST00000518678 PI4KAP1Q8N8J0 262 aa22.6■■□□□ 1.21
TRAM1-202ENST00000518678 NOB1Q9ULX3 412 aaKnown RBP22.6■■□□□ 1.21
TRAM1-202ENST00000518678 ATP10DQ9P241 1426 aa22.58■■□□□ 1.21
TRAM1-202ENST00000518678 MAP3K2Q9Y2U5 619 aa22.58■■□□□ 1.21
TRAM1-202ENST00000518678 ANKRD36CQ5JPF3 1778 aa22.58■■□□□ 1.2
TRAM1-202ENST00000518678 YBX3P16989 372 aaKnown RBP eCLIP22.57■■□□□ 1.27e-10■□□□□ 10.2
TRAM1-202ENST00000518678 HSP90AB3PQ58FF7 597 aa22.57■■□□□ 1.2
TRAM1-202ENST00000518678 TBC1D9BQ66K14 1250 aa22.57■■□□□ 1.2
TRAM1-202ENST00000518678 ARHGAP45Q92619 1136 aa22.57■■□□□ 1.2
TRAM1-202ENST00000518678 METTL22Q9BUU2 404 aaPredicted RBP22.57■■□□□ 1.2
TRAM1-202ENST00000518678 WWC3Q9ULE0 1092 aa22.57■■□□□ 1.2
TRAM1-202ENST00000518678 IPO8O15397 1037 aaKnown RBP22.56■■□□□ 1.2
TRAM1-202ENST00000518678 TM4SF1P30408 202 aa22.56■■□□□ 1.2
TRAM1-202ENST00000518678 TCIRG1Q13488 830 aa22.56■■□□□ 1.2
TRAM1-202ENST00000518678 GPR162Q16538 588 aa22.56■■□□□ 1.2
TRAM1-202ENST00000518678 DNAAF4Q8WXU2 420 aa22.56■■□□□ 1.2
TRAM1-202ENST00000518678 NFIXQ14938 502 aa22.55■■□□□ 1.2
TRAM1-202ENST00000518678 ZNF34Q8IZ26 560 aa22.55■■□□□ 1.2
TRAM1-202ENST00000518678 FRAT1Q92837 279 aaPredicted RBP22.55■■□□□ 1.2
TRAM1-202ENST00000518678 API5Q9BZZ5 524 aaKnown RBP22.55■■□□□ 1.2
TRAM1-202ENST00000518678 F6X3S4 739 aa22.54■■□□□ 1.2
TRAM1-202ENST00000518678 MYD88Q99836 296 aa22.54■■□□□ 1.2
TRAM1-202ENST00000518678 NIP7Q9Y221 180 aaKnown RBP eCLIP22.54■■□□□ 1.2
TRAM1-202ENST00000518678 ZKSCAN2Q63HK3 967 aa22.53■■□□□ 1.2
TRAM1-202ENST00000518678 BICDL1Q6ZP65 573 aa22.53■■□□□ 1.2
TRAM1-202ENST00000518678 SETDB2Q96T68 719 aa22.53■■□□□ 1.2
TRAM1-202ENST00000518678 ISCA1Q9BUE6 129 aa22.53■■□□□ 1.2
TRAM1-202ENST00000518678 KIAA1551Q9HCM1 1747 aa22.53■■□□□ 1.2
TRAM1-202ENST00000518678 MMP10P09238 476 aa22.52■■□□□ 1.2
TRAM1-202ENST00000518678 GPTP24298 496 aa22.52■■□□□ 1.2
TRAM1-202ENST00000518678 NEXNQ0ZGT2 675 aa22.52■■□□□ 1.2
TRAM1-202ENST00000518678 ATF7IPQ6VMQ6 1270 aa22.52■■□□□ 1.2
TRAM1-202ENST00000518678 UBN2Q6ZU65 1347 aa22.52■■□□□ 1.2
TRAM1-202ENST00000518678 CARMIL3Q8ND23 1372 aa22.51■■□□□ 1.19
TRAM1-202ENST00000518678 N4BP2Q86UW6 1770 aaPredicted RBP22.51■■□□□ 1.19
TRAM1-202ENST00000518678 DDR1Q08345 913 aa22.51■■□□□ 1.19
TRAM1-202ENST00000518678 TRIM28Q13263 835 aaKnown RBP22.51■■□□□ 1.19
TRAM1-202ENST00000518678 PXDNLA1KZ92 1463 aa22.51■■□□□ 1.19
TRAM1-202ENST00000518678 ATP5J2-PTCD1G3V325 749 aa22.5■■□□□ 1.19
TRAM1-202ENST00000518678 POLRMTO00411 1230 aaKnown RBP22.5■■□□□ 1.19
TRAM1-202ENST00000518678 IGKV5-2P06315 115 aa22.5■■□□□ 1.19
TRAM1-202ENST00000518678 TRIM27P14373 513 aa22.5■■□□□ 1.19
TRAM1-202ENST00000518678 PARP10Q53GL7 1025 aa22.5■■□□□ 1.19
TRAM1-202ENST00000518678 PARP3Q9Y6F1 533 aa22.5■■□□□ 1.19
TRAM1-202ENST00000518678 BEND3Q5T5X7 828 aa22.49■■□□□ 1.19
TRAM1-202ENST00000518678 SLC4A10Q6U841 1118 aa22.49■■□□□ 1.19
TRAM1-202ENST00000518678 NLRP10Q86W26 655 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 160.1 ms