RNA–Protein interactions for RNA: ENST00000518447.1

SCUBE2-203, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 2

Gene SCUBE2, Length 462 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-203ENST00000518447 KCNA3P22001 575 aa8.25□□□□□ -1.09
SCUBE2-203ENST00000518447 CRKLP46109 303 aaKnown RBP8.25□□□□□ -1.09
SCUBE2-203ENST00000518447 CNGB1Q14028 1251 aaPredicted RBP8.25□□□□□ -1.09
SCUBE2-203ENST00000518447 TRAPPC3LQ5T215 181 aa8.25□□□□□ -1.09
SCUBE2-203ENST00000518447 DCAF8Q5TAQ9 597 aa8.25□□□□□ -1.09
SCUBE2-203ENST00000518447 BOLA1Q9Y3E2 137 aa8.25□□□□□ -1.09
SCUBE2-203ENST00000518447 MRC1P22897 1456 aa8.25□□□□□ -1.09
SCUBE2-203ENST00000518447 RFC4P35249 363 aa8.24□□□□□ -1.09
SCUBE2-203ENST00000518447 CABP4P57796 275 aa8.24□□□□□ -1.09
SCUBE2-203ENST00000518447 LSM11P83369 360 aaKnown RBP eCLIP8.24□□□□□ -1.09
SCUBE2-203ENST00000518447 RASSF7Q02833 373 aa8.24□□□□□ -1.09
SCUBE2-203ENST00000518447 TRIM26Q12899 539 aaPredicted RBP8.24□□□□□ -1.09
SCUBE2-203ENST00000518447 C9orf131Q5VYM1 1079 aa8.24□□□□□ -1.09
SCUBE2-203ENST00000518447 SULT6B1Q6IMI4 303 aa8.24□□□□□ -1.09
SCUBE2-203ENST00000518447 NFATC2IPQ8NCF5 419 aa8.24□□□□□ -1.09
SCUBE2-203ENST00000518447 USP42Q9H9J4 1324 aaKnown RBP8.24□□□□□ -1.09
SCUBE2-203ENST00000518447 SLC24A1O60721 1099 aa8.23□□□□□ -1.09
SCUBE2-203ENST00000518447 RPS6KA4O75676 772 aa8.23□□□□□ -1.09
SCUBE2-203ENST00000518447 HMOX1P09601 288 aa8.23□□□□□ -1.09
SCUBE2-203ENST00000518447 MTHFSP49914 203 aa8.23□□□□□ -1.09
SCUBE2-203ENST00000518447 SLC39A6Q13433 755 aa8.23□□□□□ -1.09
SCUBE2-203ENST00000518447 INTS5Q6P9B9 1019 aaKnown RBP8.23□□□□□ -1.09
SCUBE2-203ENST00000518447 DNAJC10Q8IXB1 793 aa8.23□□□□□ -1.09
SCUBE2-203ENST00000518447 DCAF5Q96JK2 942 aa8.23□□□□□ -1.09
SCUBE2-203ENST00000518447 CCDC87Q9NVE4 849 aa8.23□□□□□ -1.09
SCUBE2-203ENST00000518447 PARP3Q9Y6F1 533 aa8.23□□□□□ -1.09
SCUBE2-203ENST00000518447 BCORQ6W2J9 1755 aa8.22□□□□□ -1.09
SCUBE2-203ENST00000518447 ERVV-2B6SEH9 535 aa8.22□□□□□ -1.09
SCUBE2-203ENST00000518447 PRELPP51888 382 aa8.22□□□□□ -1.09
SCUBE2-203ENST00000518447 PLEKHO1Q53GL0 409 aaPredicted RBP8.22□□□□□ -1.09
SCUBE2-203ENST00000518447 MORC1Q86VD1 984 aa8.22□□□□□ -1.09
SCUBE2-203ENST00000518447 NLGN1Q8N2Q7 840 aa8.22□□□□□ -1.09
SCUBE2-203ENST00000518447 CCDC24Q8N4L8 307 aa8.22□□□□□ -1.09
SCUBE2-203ENST00000518447 LGR6Q9HBX8 967 aa8.22□□□□□ -1.09
SCUBE2-203ENST00000518447 ZSWIM6Q9HCJ5 1215 aa8.22□□□□□ -1.09
SCUBE2-203ENST00000518447 RNF181Q9P0P0 153 aa8.22□□□□□ -1.09
SCUBE2-203ENST00000518447 POLRMTO00411 1230 aaKnown RBP8.21□□□□□ -1.1
SCUBE2-203ENST00000518447 IL13P35225 146 aa8.21□□□□□ -1.1
SCUBE2-203ENST00000518447 TGFB2P61812 414 aa8.21□□□□□ -1.1
SCUBE2-203ENST00000518447 C1orf141Q5JVX7 400 aa8.21□□□□□ -1.1
SCUBE2-203ENST00000518447 USPL1Q5W0Q7 1092 aa8.21□□□□□ -1.1
SCUBE2-203ENST00000518447 DNAJC5GQ8N7S2 189 aa8.21□□□□□ -1.1
SCUBE2-203ENST00000518447 IRX2Q9BZI1 471 aaPredicted RBP8.21□□□□□ -1.1
SCUBE2-203ENST00000518447 COL15A1P39059 1388 aa8.21□□□□□ -1.1
SCUBE2-203ENST00000518447 COL3A1P02461 1466 aaPredicted RBP8.2□□□□□ -1.1
SCUBE2-203ENST00000518447 RC3H1Q5TC82 1133 aaKnown RBP8.2□□□□□ -1.1
SCUBE2-203ENST00000518447 GPR153Q6NV75 609 aa8.2□□□□□ -1.1
SCUBE2-203ENST00000518447 BCL2L12Q9HB09 334 aa8.2□□□□□ -1.1
SCUBE2-203ENST00000518447 ZBTB1Q9Y2K1 713 aa8.2□□□□□ -1.1
SCUBE2-203ENST00000518447 SOS1Q07889 1333 aaPredicted RBP8.2□□□□□ -1.1
SCUBE2-203ENST00000518447 FER1L6Q2WGJ9 1857 aa8.19□□□□□ -1.1
SCUBE2-203ENST00000518447 TOMM70O94826 608 aa8.19□□□□□ -1.1
SCUBE2-203ENST00000518447 HSP90AB1P08238 724 aaKnown RBP8.19□□□□□ -1.1
SCUBE2-203ENST00000518447 EIF4G2P78344 907 aaKnown RBP eCLIP8.19□□□□□ -1.1
SCUBE2-203ENST00000518447 NFIXQ14938 502 aa8.19□□□□□ -1.1
SCUBE2-203ENST00000518447 DALRD3Q5D0E6 543 aaKnown RBP8.19□□□□□ -1.1
SCUBE2-203ENST00000518447 BICDL1Q6ZP65 573 aa8.19□□□□□ -1.1
SCUBE2-203ENST00000518447 RRAGCQ9HB90 399 aa8.19□□□□□ -1.1
SCUBE2-203ENST00000518447 PIM2Q9P1W9 311 aa8.19□□□□□ -1.1
SCUBE2-203ENST00000518447 ARFGEF2Q9Y6D5 1785 aa8.19□□□□□ -1.1
SCUBE2-203ENST00000518447 SLX4Q8IY92 1834 aa8.19□□□□□ -1.1
SCUBE2-203ENST00000518447 PLEKHG2Q9H7P9 1386 aa8.19□□□□□ -1.1
SCUBE2-203ENST00000518447 DICER1Q9UPY3 1922 aaKnown RBP8.19□□□□□ -1.1
SCUBE2-203ENST00000518447 CYP19A1P11511 503 aaPredicted RBP8.18□□□□□ -1.1
SCUBE2-203ENST00000518447 CANXP27824 592 aaKnown RBP8.18□□□□□ -1.1
SCUBE2-203ENST00000518447 APLP1P51693 650 aa8.18□□□□□ -1.1
SCUBE2-203ENST00000518447 MTHFSDQ2M296 383 aaKnown RBP8.18□□□□□ -1.1
SCUBE2-203ENST00000518447 AMOTQ4VCS5 1084 aa8.18□□□□□ -1.1
SCUBE2-203ENST00000518447 CC2D1BQ5T0F9 858 aaKnown RBP8.18□□□□□ -1.1
SCUBE2-203ENST00000518447 COL13A1Q5TAT6 717 aaPredicted RBP8.18□□□□□ -1.1
SCUBE2-203ENST00000518447 SLC52A2Q9HAB3 445 aa8.18□□□□□ -1.1
SCUBE2-203ENST00000518447 KIF7Q2M1P5 1343 aa8.18□□□□□ -1.1
SCUBE2-203ENST00000518447 RNMTO43148 476 aaKnown RBP8.17□□□□□ -1.1
SCUBE2-203ENST00000518447 TM4SF1P30408 202 aa8.17□□□□□ -1.1
SCUBE2-203ENST00000518447 PIP4K2AP48426 406 aaPredicted RBP8.17□□□□□ -1.1
SCUBE2-203ENST00000518447 AMER1Q5JTC6 1135 aaPredicted RBP8.17□□□□□ -1.1
SCUBE2-203ENST00000518447 ZNF330Q9Y3S2 320 aaPredicted RBP8.17□□□□□ -1.1
SCUBE2-203ENST00000518447 NFKBIEO00221 500 aa8.16□□□□□ -1.1
SCUBE2-203ENST00000518447 ZPR1O75312 459 aa8.16□□□□□ -1.1
SCUBE2-203ENST00000518447 AKAP4Q5JQC9 854 aa8.16□□□□□ -1.1
SCUBE2-203ENST00000518447 ZNF467Q7Z7K2 595 aaPredicted RBP8.16□□□□□ -1.1
SCUBE2-203ENST00000518447 C16orf71Q8IYS4 520 aaPredicted RBP8.16□□□□□ -1.1
SCUBE2-203ENST00000518447 SERPINB2P05120 415 aa8.15□□□□□ -1.1
SCUBE2-203ENST00000518447 TBC1D9BQ66K14 1250 aa8.15□□□□□ -1.1
SCUBE2-203ENST00000518447 SLC51AQ86UW1 340 aa8.15□□□□□ -1.1
SCUBE2-203ENST00000518447 C2CD5Q86YS7 1000 aa8.15□□□□□ -1.1
SCUBE2-203ENST00000518447 RBM46Q8TBY0 533 aaKnown RBP8.15□□□□□ -1.1
SCUBE2-203ENST00000518447 KNSTRNQ9Y448 316 aa8.15□□□□□ -1.1
SCUBE2-203ENST00000518447 DLG5Q8TDM6 1919 aa8.15□□□□□ -1.11
SCUBE2-203ENST00000518447 LAMB4A4D0S4 1761 aa8.15□□□□□ -1.11
SCUBE2-203ENST00000518447 KDM2BQ8NHM5 1336 aa8.14□□□□□ -1.11
SCUBE2-203ENST00000518447 PRAMEF22A3QJZ6 481 aa8.14□□□□□ -1.11
SCUBE2-203ENST00000518447 KCNQ3O43525 872 aa8.14□□□□□ -1.11
SCUBE2-203ENST00000518447 HMGB2P26583 209 aaKnown RBP8.14□□□□□ -1.11
SCUBE2-203ENST00000518447 KLRG1Q96E93 195 aa8.14□□□□□ -1.11
SCUBE2-203ENST00000518447 ZNF496Q96IT1 587 aaPredicted RBP8.14□□□□□ -1.11
SCUBE2-203ENST00000518447 NARFQ9UHQ1 456 aa8.14□□□□□ -1.11
SCUBE2-203ENST00000518447 TBC1D2BQ9UPU7 963 aa8.14□□□□□ -1.11
SCUBE2-203ENST00000518447 U2SURPO15042 1029 aaKnown RBP8.13□□□□□ -1.11
SCUBE2-203ENST00000518447 PSEN1P49768 467 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms