RNA–Protein interactions for RNA: ENST00000518430.1

GINS4-202, Transcript of GINS complex subunit 4, humanhuman

TSL 2

Gene GINS4, Length 515 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS4-202ENST00000518430 CEP120Q8N960 986 aa11.03□□□□□ -0.64
GINS4-202ENST00000518430 CCDC112Q8NEF3 446 aa11.03□□□□□ -0.64
GINS4-202ENST00000518430 RAPGEF4Q8WZA2 1011 aa11.03□□□□□ -0.64
GINS4-202ENST00000518430 NBPF4Q96M43 638 aa11.03□□□□□ -0.64
GINS4-202ENST00000518430 SPINK5Q9NQ38 1064 aaPredicted RBP11.03□□□□□ -0.64
GINS4-202ENST00000518430 SHPRHQ149N8 1683 aa11.02□□□□□ -0.64
GINS4-202ENST00000518430 PEAK1Q9H792 1746 aa11.02□□□□□ -0.65
GINS4-202ENST00000518430 ADCY5O95622 1261 aa11.02□□□□□ -0.65
GINS4-202ENST00000518430 BMS1Q14692 1282 aaKnown RBP11.02□□□□□ -0.65
GINS4-202ENST00000518430 PLEKHO1Q53GL0 409 aaPredicted RBP11.02□□□□□ -0.65
GINS4-202ENST00000518430 ZNF428Q96B54 188 aa11.02□□□□□ -0.65
GINS4-202ENST00000518430 NGLY1Q96IV0 654 aa11.02□□□□□ -0.65
GINS4-202ENST00000518430 CARD10Q9BWT7 1032 aa11.02□□□□□ -0.65
GINS4-202ENST00000518430 STRN4Q9NRL3 753 aa11.02□□□□□ -0.65
GINS4-202ENST00000518430 FAM53CQ9NYF3 392 aa11.02□□□□□ -0.65
GINS4-202ENST00000518430 V9GYY5 206 aaPredicted RBP11.02□□□□□ -0.65
GINS4-202ENST00000518430 CRYBG1Q9Y4K1 1723 aa11.01□□□□□ -0.65
GINS4-202ENST00000518430 KDM4AO75164 1064 aa11.01□□□□□ -0.65
GINS4-202ENST00000518430 TATP17735 454 aaPredicted RBP11.01□□□□□ -0.65
GINS4-202ENST00000518430 CYP2C19P33261 490 aa11.01□□□□□ -0.65
GINS4-202ENST00000518430 NFE2L2Q16236 605 aa11.01□□□□□ -0.65
GINS4-202ENST00000518430 INTS3Q68E01 1043 aaKnown RBP11.01□□□□□ -0.65
GINS4-202ENST00000518430 TMEM87AQ8NBN3 555 aa11.01□□□□□ -0.65
GINS4-202ENST00000518430 SECISBP2LQ93073 1101 aaKnown RBP11.01□□□□□ -0.65
GINS4-202ENST00000518430 MYCBPQ99417 103 aaPredicted RBP11.01□□□□□ -0.65
GINS4-202ENST00000518430 RNF216Q9NWF9 866 aaPredicted RBP11.01□□□□□ -0.65
GINS4-202ENST00000518430 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.01□□□□□ -0.65
GINS4-202ENST00000518430 FEZ2Q9UHY8 353 aaPredicted RBP11.01□□□□□ -0.65
GINS4-202ENST00000518430 CCDC171Q6TFL3 1326 aa11.01□□□□□ -0.65
GINS4-202ENST00000518430 COL5A2P05997 1499 aaPredicted RBP11□□□□□ -0.65
GINS4-202ENST00000518430 NEMFO60524 1076 aa11□□□□□ -0.65
GINS4-202ENST00000518430 TUBB4AP04350 444 aa11□□□□□ -0.65
GINS4-202ENST00000518430 APPP05067 770 aa11□□□□□ -0.65
GINS4-202ENST00000518430 RLBP1P12271 317 aa11□□□□□ -0.65
GINS4-202ENST00000518430 TMPOP42166 694 aaKnown RBP11□□□□□ -0.65
GINS4-202ENST00000518430 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11□□□□□ -0.65
GINS4-202ENST00000518430 AEBP1Q8IUX7 1158 aa11□□□□□ -0.65
GINS4-202ENST00000518430 FNBP4Q8N3X1 1017 aaPredicted RBP11□□□□□ -0.65
GINS4-202ENST00000518430 INTS4Q96HW7 963 aaKnown RBP11□□□□□ -0.65
GINS4-202ENST00000518430 NOL10Q9BSC4 688 aaKnown RBP11□□□□□ -0.65
GINS4-202ENST00000518430 CDCA7Q9BWT1 371 aaPredicted RBP11□□□□□ -0.65
GINS4-202ENST00000518430 SPG7Q9UQ90 795 aa11□□□□□ -0.65
GINS4-202ENST00000518430 THRAP3Q9Y2W1 955 aaKnown RBP11□□□□□ -0.65
GINS4-202ENST00000518430 LTN1O94822 1766 aa11□□□□□ -0.65
GINS4-202ENST00000518430 COL14A1Q05707 1796 aaKnown RBP11□□□□□ -0.65
GINS4-202ENST00000518430 CRB1P82279 1406 aa11□□□□□ -0.65
GINS4-202ENST00000518430 CAMTA1Q9Y6Y1 1673 aa10.99□□□□□ -0.65
GINS4-202ENST00000518430 ATP8B1O43520 1251 aa10.99□□□□□ -0.65
GINS4-202ENST00000518430 DHX8Q14562 1220 aaKnown RBP10.99□□□□□ -0.65
GINS4-202ENST00000518430 ATF7IPQ6VMQ6 1270 aa10.99□□□□□ -0.65
GINS4-202ENST00000518430 TBC1D9Q6ZT07 1266 aa10.99□□□□□ -0.65
GINS4-202ENST00000518430 UNC5CLQ8IV45 518 aa10.99□□□□□ -0.65
GINS4-202ENST00000518430 RNF214Q8ND24 703 aa10.99□□□□□ -0.65
GINS4-202ENST00000518430 RTF1Q92541 710 aaKnown RBP10.99□□□□□ -0.65
GINS4-202ENST00000518430 ERO1AQ96HE7 468 aa10.99□□□□□ -0.65
GINS4-202ENST00000518430 C8orf37Q96NL8 207 aa10.99□□□□□ -0.65
GINS4-202ENST00000518430 FOXD4L1Q9NU39 408 aa10.99□□□□□ -0.65
GINS4-202ENST00000518430 RBM27Q9P2N5 1060 aaKnown RBP10.99□□□□□ -0.65
GINS4-202ENST00000518430 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.99□□□□□ -0.65
GINS4-202ENST00000518430 IL16Q14005 1332 aa10.99□□□□□ -0.65
GINS4-202ENST00000518430 NCAPD2Q15021 1401 aa10.99□□□□□ -0.65
GINS4-202ENST00000518430 GTF2A1P52655 376 aaPredicted RBP10.98□□□□□ -0.65
GINS4-202ENST00000518430 LARP1Q6PKG0 1096 aaKnown RBP10.98□□□□□ -0.65
GINS4-202ENST00000518430 ITPRIPQ8IWB1 547 aa10.98□□□□□ -0.65
GINS4-202ENST00000518430 USHBP1Q8N6Y0 703 aa10.98□□□□□ -0.65
GINS4-202ENST00000518430 PHACTR3Q96KR7 559 aa10.98□□□□□ -0.65
GINS4-202ENST00000518430 NCAPGQ9BPX3 1015 aa10.98□□□□□ -0.65
GINS4-202ENST00000518430 ARGLU1Q9NWB6 273 aaPredicted RBP10.98□□□□□ -0.65
GINS4-202ENST00000518430 HDAC5Q9UQL6 1122 aa10.98□□□□□ -0.65
GINS4-202ENST00000518430 ATP6V1DQ9Y5K8 247 aa10.98□□□□□ -0.65
GINS4-202ENST00000518430 ABCA3Q99758 1704 aa10.98□□□□□ -0.65
GINS4-202ENST00000518430 BRD1O95696 1058 aa10.97□□□□□ -0.65
GINS4-202ENST00000518430 IL2RBP14784 551 aa10.97□□□□□ -0.65
GINS4-202ENST00000518430 CAPN2P17655 700 aa10.97□□□□□ -0.65
GINS4-202ENST00000518430 NEUROD2Q15784 382 aa10.97□□□□□ -0.65
GINS4-202ENST00000518430 C1orf141Q5JVX7 400 aa10.97□□□□□ -0.65
GINS4-202ENST00000518430 MNS1Q8NEH6 495 aa10.97□□□□□ -0.65
GINS4-202ENST00000518430 KIF1BPQ96EK5 621 aa10.97□□□□□ -0.65
GINS4-202ENST00000518430 TTC12Q9H892 705 aaPredicted RBP10.97□□□□□ -0.65
GINS4-202ENST00000518430 ZBTB40Q9NUA8 1239 aa10.97□□□□□ -0.65
GINS4-202ENST00000518430 USP21Q9UK80 565 aa10.97□□□□□ -0.65
GINS4-202ENST00000518430 WDR33Q9C0J8 1336 aaKnown RBP10.97□□□□□ -0.65
GINS4-202ENST00000518430 LMO7Q8WWI1 1683 aa10.97□□□□□ -0.65
GINS4-202ENST00000518430 COL18A1P39060 1754 aa10.97□□□□□ -0.65
GINS4-202ENST00000518430 RGPD1P0DJD0 1748 aa10.96□□□□□ -0.65
GINS4-202ENST00000518430 SLIT2O94813 1529 aa10.96□□□□□ -0.65
GINS4-202ENST00000518430 GNAT3A8MTJ3 354 aa10.96□□□□□ -0.65
GINS4-202ENST00000518430 CD2BP2O95400 341 aaKnown RBP10.96□□□□□ -0.65
GINS4-202ENST00000518430 MX1P20591 662 aa10.96□□□□□ -0.65
GINS4-202ENST00000518430 MCCP23508 829 aa10.96□□□□□ -0.65
GINS4-202ENST00000518430 VPS72Q15906 364 aa10.96□□□□□ -0.65
GINS4-202ENST00000518430 ALDH1L2Q3SY69 923 aa10.96□□□□□ -0.65
GINS4-202ENST00000518430 ICE2Q659A1 982 aa10.96□□□□□ -0.65
GINS4-202ENST00000518430 SMC4Q9NTJ3 1288 aa10.96□□□□□ -0.65
GINS4-202ENST00000518430 CCDC9Q9Y3X0 531 aaKnown RBP10.96□□□□□ -0.65
GINS4-202ENST00000518430 FAM208AQ9UK61 1670 aaKnown RBP10.95□□□□□ -0.66
GINS4-202ENST00000518430 ELP1O95163 1332 aa10.95□□□□□ -0.66
GINS4-202ENST00000518430 ZBTB22O15209 634 aa10.95□□□□□ -0.66
GINS4-202ENST00000518430 KIF1CO43896 1103 aaKnown RBP10.95□□□□□ -0.66
GINS4-202ENST00000518430 TPM1P09493 284 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms