RNA–Protein interactions for RNA: ENST00000518170.1

EFCAB13-205, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 3

Gene EFCAB13, Length 355 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-205ENST00000518170 RAB3GAP1Q15042 981 aa10.48□□□□□ -0.73
EFCAB13-205ENST00000518170 ZSCAN30Q86W11 494 aa10.48□□□□□ -0.73
EFCAB13-205ENST00000518170 ANP32BQ92688 251 aaKnown RBP10.48□□□□□ -0.73
EFCAB13-205ENST00000518170 HMX1Q9NP08 348 aaPredicted RBP10.48□□□□□ -0.73
EFCAB13-205ENST00000518170 PTPRTO14522 1441 aa10.48□□□□□ -0.73
EFCAB13-205ENST00000518170 ERVK-7P63135 1459 aa10.48□□□□□ -0.73
EFCAB13-205ENST00000518170 ERCC6Q03468 1493 aa10.48□□□□□ -0.73
EFCAB13-205ENST00000518170 TET3O43151 1660 aa10.47□□□□□ -0.73
EFCAB13-205ENST00000518170 VARSP26640 1264 aaKnown RBP10.47□□□□□ -0.73
EFCAB13-205ENST00000518170 HNRNPMP52272 730 aaKnown RBP eCLIP10.47□□□□□ -0.73
EFCAB13-205ENST00000518170 MVPQ14764 893 aaKnown RBP10.47□□□□□ -0.73
EFCAB13-205ENST00000518170 NBPF14Q5TI25 921 aa10.47□□□□□ -0.73
EFCAB13-205ENST00000518170 CLEC17AQ6ZS10 378 aa10.47□□□□□ -0.73
EFCAB13-205ENST00000518170 EPS8L1Q8TE68 723 aa10.47□□□□□ -0.73
EFCAB13-205ENST00000518170 RUNDC1Q96C34 613 aa10.47□□□□□ -0.73
EFCAB13-205ENST00000518170 KIF16BQ96L93 1317 aa10.47□□□□□ -0.73
EFCAB13-205ENST00000518170 ARHGAP5Q13017 1502 aa10.47□□□□□ -0.73
EFCAB13-205ENST00000518170 INO80Q9ULG1 1556 aaPredicted RBP10.47□□□□□ -0.73
EFCAB13-205ENST00000518170 DEPDC5O75140 1603 aa10.47□□□□□ -0.73
EFCAB13-205ENST00000518170 CLTCL1P53675 1640 aa10.47□□□□□ -0.73
EFCAB13-205ENST00000518170 GOLGA6L22H0YM25 854 aa10.46□□□□□ -0.73
EFCAB13-205ENST00000518170 J3QL48 77 aa10.46□□□□□ -0.73
EFCAB13-205ENST00000518170 ALDH1A1P00352 501 aa10.46□□□□□ -0.73
EFCAB13-205ENST00000518170 KIAA1211Q6ZU35 1233 aa10.46□□□□□ -0.73
EFCAB13-205ENST00000518170 BPHLQ86WA6 291 aaPredicted RBP10.46□□□□□ -0.73
EFCAB13-205ENST00000518170 ARXQ96QS3 562 aa10.46□□□□□ -0.73
EFCAB13-205ENST00000518170 FKBPLQ9UIM3 349 aa10.46□□□□□ -0.73
EFCAB13-205ENST00000518170 MAP3K4Q9Y6R4 1608 aa10.46□□□□□ -0.74
EFCAB13-205ENST00000518170 IFT172Q9UG01 1749 aa10.45□□□□□ -0.74
EFCAB13-205ENST00000518170 ZC3H13Q5T200 1668 aaKnown RBP10.45□□□□□ -0.74
EFCAB13-205ENST00000518170 ABCA6Q8N139 1617 aa10.45□□□□□ -0.74
EFCAB13-205ENST00000518170 YEATS2Q9ULM3 1422 aa10.45□□□□□ -0.74
EFCAB13-205ENST00000518170 SIAH2O43255 324 aa10.45□□□□□ -0.74
EFCAB13-205ENST00000518170 MFAP1P55081 439 aaKnown RBP10.45□□□□□ -0.74
EFCAB13-205ENST00000518170 ZKSCAN2Q63HK3 967 aa10.45□□□□□ -0.74
EFCAB13-205ENST00000518170 SETBP1Q9Y6X0 1596 aa10.44□□□□□ -0.74
EFCAB13-205ENST00000518170 MSNP26038 577 aaKnown RBP10.44□□□□□ -0.74
EFCAB13-205ENST00000518170 PNMA1Q8ND90 353 aa10.44□□□□□ -0.74
EFCAB13-205ENST00000518170 BANK1Q8NDB2 785 aa10.44□□□□□ -0.74
EFCAB13-205ENST00000518170 TNPO1Q92973 898 aaKnown RBP10.44□□□□□ -0.74
EFCAB13-205ENST00000518170 ZNF518AQ6AHZ1 1483 aa10.43□□□□□ -0.74
EFCAB13-205ENST00000518170 MAGEB6P1A0A0J9YX57 407 aa10.43□□□□□ -0.74
EFCAB13-205ENST00000518170 HSP90AB1P08238 724 aaKnown RBP10.43□□□□□ -0.74
EFCAB13-205ENST00000518170 RLBP1P12271 317 aa10.43□□□□□ -0.74
EFCAB13-205ENST00000518170 SMPD1P17405 629 aa10.43□□□□□ -0.74
EFCAB13-205ENST00000518170 MCM5P33992 734 aa10.43□□□□□ -0.74
EFCAB13-205ENST00000518170 NASPP49321 788 aaPredicted RBP10.43□□□□□ -0.74
EFCAB13-205ENST00000518170 ZNF445P59923 1031 aa10.43□□□□□ -0.74
EFCAB13-205ENST00000518170 ZNF787Q6DD87 383 aa10.43□□□□□ -0.74
EFCAB13-205ENST00000518170 FAM174AQ8TBP5 190 aa10.43□□□□□ -0.74
EFCAB13-205ENST00000518170 GPKOWQ92917 476 aaPredicted RBP eCLIP10.43□□□□□ -0.74
EFCAB13-205ENST00000518170 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.43□□□□□ -0.74
EFCAB13-205ENST00000518170 ZNF500O60304 480 aaPredicted RBP10.42□□□□□ -0.74
EFCAB13-205ENST00000518170 KLHL40Q2TBA0 621 aa10.42□□□□□ -0.74
EFCAB13-205ENST00000518170 C4orf48Q5BLP8 95 aa10.42□□□□□ -0.74
EFCAB13-205ENST00000518170 GAS2L3Q86XJ1 694 aa10.42□□□□□ -0.74
EFCAB13-205ENST00000518170 SMAP1Q8IYB5 467 aaPredicted RBP10.42□□□□□ -0.74
EFCAB13-205ENST00000518170 DZIP1LQ8IYY4 767 aaKnown RBP10.42□□□□□ -0.74
EFCAB13-205ENST00000518170 DDX19BQ9UMR2 479 aa10.42□□□□□ -0.74
EFCAB13-205ENST00000518170 NSD2O96028 1365 aa10.41□□□□□ -0.74
EFCAB13-205ENST00000518170 VWDEQ8N2E2 1590 aa10.41□□□□□ -0.74
EFCAB13-205ENST00000518170 ARID5BQ14865 1188 aa10.41□□□□□ -0.74
EFCAB13-205ENST00000518170 PDXDC2PQ6P474 469 aa10.41□□□□□ -0.74
EFCAB13-205ENST00000518170 CARD14Q9BXL6 1004 aa10.41□□□□□ -0.74
EFCAB13-205ENST00000518170 TRIM34Q9BYJ4 488 aa10.41□□□□□ -0.74
EFCAB13-205ENST00000518170 SNRKQ9NRH2 765 aa10.41□□□□□ -0.74
EFCAB13-205ENST00000518170 TLL2Q9Y6L7 1015 aa10.41□□□□□ -0.74
EFCAB13-205ENST00000518170 WASF2Q9Y6W5 498 aa10.41□□□□□ -0.74
EFCAB13-205ENST00000518170 ABCC1P33527 1531 aa10.41□□□□□ -0.74
EFCAB13-205ENST00000518170 ABCC11Q96J66 1382 aa10.4□□□□□ -0.74
EFCAB13-205ENST00000518170 SH3BP5LQ7L8J4 393 aa10.4□□□□□ -0.74
EFCAB13-205ENST00000518170 FTSJ3Q8IY81 847 aaKnown RBP10.4□□□□□ -0.74
EFCAB13-205ENST00000518170 CFAP53Q96M91 514 aa10.4□□□□□ -0.74
EFCAB13-205ENST00000518170 NRXN1Q9ULB1 1477 aa10.4□□□□□ -0.74
EFCAB13-205ENST00000518170 PPRC1Q5VV67 1664 aaKnown RBP10.4□□□□□ -0.74
EFCAB13-205ENST00000518170 ZC3H4Q9UPT8 1303 aaKnown RBP10.39□□□□□ -0.75
EFCAB13-205ENST00000518170 K7ELQ4 463 aaPredicted RBP10.39□□□□□ -0.75
EFCAB13-205ENST00000518170 DYNC1I1O14576 645 aa10.39□□□□□ -0.75
EFCAB13-205ENST00000518170 RIPK4P57078 832 aa10.39□□□□□ -0.75
EFCAB13-205ENST00000518170 BMP2KLQ5H9B9 411 aa10.39□□□□□ -0.75
EFCAB13-205ENST00000518170 SH3RF1Q7Z6J0 888 aa10.39□□□□□ -0.75
EFCAB13-205ENST00000518170 ARHGAP9Q9BRR9 750 aa10.39□□□□□ -0.75
EFCAB13-205ENST00000518170 IL16Q14005 1332 aa10.38□□□□□ -0.75
EFCAB13-205ENST00000518170 KIF1BO60333 1816 aa10.38□□□□□ -0.75
EFCAB13-205ENST00000518170 MED14O60244 1454 aa10.38□□□□□ -0.75
EFCAB13-205ENST00000518170 AVPP01185 164 aa10.38□□□□□ -0.75
EFCAB13-205ENST00000518170 PTK2Q05397 1052 aa10.38□□□□□ -0.75
EFCAB13-205ENST00000518170 ZBTB33Q86T24 672 aa10.38□□□□□ -0.75
EFCAB13-205ENST00000518170 TCP11L2Q8N4U5 519 aa10.38□□□□□ -0.75
EFCAB13-205ENST00000518170 HPS1Q92902 700 aa10.38□□□□□ -0.75
EFCAB13-205ENST00000518170 PDLIM2Q96JY6 352 aa10.38□□□□□ -0.75
EFCAB13-205ENST00000518170 CHMP4BQ9H444 224 aaKnown RBP10.38□□□□□ -0.75
EFCAB13-205ENST00000518170 AAASQ9NRG9 546 aa10.38□□□□□ -0.75
EFCAB13-205ENST00000518170 PRDM4Q9UKN5 801 aa10.38□□□□□ -0.75
EFCAB13-205ENST00000518170 NOL7Q9UMY1 257 aaKnown RBP10.38□□□□□ -0.75
EFCAB13-205ENST00000518170 NSD3Q9BZ95 1437 aa10.38□□□□□ -0.75
EFCAB13-205ENST00000518170 TRAPPC8Q9Y2L5 1435 aa10.38□□□□□ -0.75
EFCAB13-205ENST00000518170 ARAP3Q8WWN8 1544 aa10.38□□□□□ -0.75
EFCAB13-205ENST00000518170 QRICH2Q9H0J4 1663 aa10.38□□□□□ -0.75
EFCAB13-205ENST00000518170 ST8SIA5O15466 376 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms