RNA–Protein interactions for RNA: ENST00000518074.5

SPIDR-206, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 2,819 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-206ENST00000518074 TRIM27P14373 513 aa13.81□□□□□ -0.2
SPIDR-206ENST00000518074 RTL5Q5HYW3 569 aaPredicted RBP13.81□□□□□ -0.2
SPIDR-206ENST00000518074 PHF14O94880 888 aa13.81□□□□□ -0.2
SPIDR-206ENST00000518074 DCTN1Q14203 1278 aa13.81□□□□□ -0.2
SPIDR-206ENST00000518074 MVPQ14764 893 aaKnown RBP13.81□□□□□ -0.2
SPIDR-206ENST00000518074 CRKLP46109 303 aaKnown RBP13.8□□□□□ -0.2
SPIDR-206ENST00000518074 IL17REQ8NFR9 667 aa13.8□□□□□ -0.2
SPIDR-206ENST00000518074 KIF13BQ9NQT8 1826 aa13.8□□□□□ -0.2
SPIDR-206ENST00000518074 C4AP0C0L4 1744 aa13.8□□□□□ -0.2
SPIDR-206ENST00000518074 PTCD1O75127 700 aaKnown RBP13.8□□□□□ -0.2
SPIDR-206ENST00000518074 MSL1Q68DK7 614 aa13.8□□□□□ -0.2
SPIDR-206ENST00000518074 ARHGEF1Q92888 912 aaKnown RBP13.8□□□□□ -0.2
SPIDR-206ENST00000518074 TEX13AQ9BXU3 409 aaPredicted RBP13.8□□□□□ -0.2
SPIDR-206ENST00000518074 CHD4Q14839 1912 aa13.79□□□□□ -0.2
SPIDR-206ENST00000518074 INTS5Q6P9B9 1019 aaKnown RBP13.79□□□□□ -0.2
SPIDR-206ENST00000518074 PDZRN3Q9UPQ7 1066 aa13.79□□□□□ -0.2
SPIDR-206ENST00000518074 CCDC87Q9NVE4 849 aa13.79□□□□□ -0.2
SPIDR-206ENST00000518074 SEC24BO95487 1268 aa13.78□□□□□ -0.2
SPIDR-206ENST00000518074 CYP19A1P11511 503 aaPredicted RBP13.78□□□□□ -0.2
SPIDR-206ENST00000518074 HSP90B1P14625 803 aaKnown RBP13.78□□□□□ -0.2
SPIDR-206ENST00000518074 YY1P25490 414 aa13.78□□□□□ -0.2
SPIDR-206ENST00000518074 RFC4P35249 363 aa13.78□□□□□ -0.2
SPIDR-206ENST00000518074 TEFQ10587 303 aa13.78□□□□□ -0.2
SPIDR-206ENST00000518074 RWDD1Q9H446 243 aaPredicted RBP13.78□□□□□ -0.2
SPIDR-206ENST00000518074 ATF7IPQ6VMQ6 1270 aa13.78□□□□□ -0.2
SPIDR-206ENST00000518074 TMEM57Q8N5G2 664 aa13.78□□□□□ -0.2
SPIDR-206ENST00000518074 GRIN3BO60391 1043 aa13.77□□□□□ -0.2
SPIDR-206ENST00000518074 NFE2L2Q16236 605 aa13.77□□□□□ -0.21
SPIDR-206ENST00000518074 TTC5Q8N0Z6 440 aa13.77□□□□□ -0.21
SPIDR-206ENST00000518074 TSPYL6Q8N831 410 aa13.77□□□□□ -0.21
SPIDR-206ENST00000518074 DDRGK1Q96HY6 314 aa13.77□□□□□ -0.21
SPIDR-206ENST00000518074 SOS1Q07889 1333 aaPredicted RBP13.77□□□□□ -0.21
SPIDR-206ENST00000518074 GYS1P13807 737 aa13.77□□□□□ -0.21
SPIDR-206ENST00000518074 DNAJC10Q8IXB1 793 aa13.77□□□□□ -0.21
SPIDR-206ENST00000518074 NLGN2Q8NFZ4 835 aa13.77□□□□□ -0.21
SPIDR-206ENST00000518074 BCCIPQ9P287 314 aaKnown RBP eCLIP13.77□□□□□ -0.21
SPIDR-206ENST00000518074 GPR162Q16538 588 aa13.76□□□□□ -0.21
SPIDR-206ENST00000518074 ZNF790Q6PG37 636 aa13.76□□□□□ -0.21
SPIDR-206ENST00000518074 USP42Q9H9J4 1324 aaKnown RBP13.76□□□□□ -0.21
SPIDR-206ENST00000518074 SRCAPQ6ZRS2 3230 aa13.76□□□□□ -0.21
SPIDR-206ENST00000518074 STARD3NLO95772 234 aa13.76□□□□□ -0.21
SPIDR-206ENST00000518074 SLC39A6Q13433 755 aa13.76□□□□□ -0.21
SPIDR-206ENST00000518074 HEG1Q9ULI3 1381 aa13.76□□□□□ -0.21
SPIDR-206ENST00000518074 SMIM5Q71RC9 77 aa13.75□□□□□ -0.21
SPIDR-206ENST00000518074 RTF1Q92541 710 aaKnown RBP13.75□□□□□ -0.21
SPIDR-206ENST00000518074 A0A087WZG4 1122 aa13.75□□□□□ -0.21
SPIDR-206ENST00000518074 MMP10P09238 476 aa13.75□□□□□ -0.21
SPIDR-206ENST00000518074 TGFB2P61812 414 aa13.75□□□□□ -0.21
SPIDR-206ENST00000518074 C10orf71Q711Q0 1435 aa13.75□□□□□ -0.21
SPIDR-206ENST00000518074 FMNL2Q96PY5 1086 aa13.74□□□□□ -0.21
SPIDR-206ENST00000518074 C1orf115Q9H7X2 142 aa13.74□□□□□ -0.21
SPIDR-206ENST00000518074 KIAA1551Q9HCM1 1747 aa13.73□□□□□ -0.21
SPIDR-206ENST00000518074 IPO8O15397 1037 aaKnown RBP13.73□□□□□ -0.21
SPIDR-206ENST00000518074 MBIPQ9NS73 344 aa13.73□□□□□ -0.21
SPIDR-206ENST00000518074 NARFQ9UHQ1 456 aa13.73□□□□□ -0.21
SPIDR-206ENST00000518074 PARP3Q9Y6F1 533 aa13.73□□□□□ -0.21
SPIDR-206ENST00000518074 BTBD11A6QL63 1104 aa13.72□□□□□ -0.21
SPIDR-206ENST00000518074 CT47B1P0C2W7 299 aaPredicted RBP13.72□□□□□ -0.21
SPIDR-206ENST00000518074 ZNF496Q96IT1 587 aaPredicted RBP13.72□□□□□ -0.21
SPIDR-206ENST00000518074 DDX19BQ9UMR2 479 aa13.72□□□□□ -0.21
SPIDR-206ENST00000518074 IL16Q14005 1332 aa13.72□□□□□ -0.21
SPIDR-206ENST00000518074 ZPR1O75312 459 aa13.72□□□□□ -0.21
SPIDR-206ENST00000518074 TM4SF1P30408 202 aa13.72□□□□□ -0.21
SPIDR-206ENST00000518074 TMEM132AQ24JP5 1023 aa13.72□□□□□ -0.21
SPIDR-206ENST00000518074 NAP1L2Q9ULW6 460 aaPredicted RBP13.72□□□□□ -0.21
SPIDR-206ENST00000518074 COL15A1P39059 1388 aa13.71□□□□□ -0.21
SPIDR-206ENST00000518074 EIF5P55010 431 aaKnown RBP13.71□□□□□ -0.21
SPIDR-206ENST00000518074 MCM10Q7L590 875 aa13.71□□□□□ -0.21
SPIDR-206ENST00000518074 C8orf58Q8NAV2 365 aa13.71□□□□□ -0.21
SPIDR-206ENST00000518074 DLG5Q8TDM6 1919 aa13.71□□□□□ -0.21
SPIDR-206ENST00000518074 RGL2O15211 777 aa13.71□□□□□ -0.22
SPIDR-206ENST00000518074 TAF7Q15545 349 aaPredicted RBP13.71□□□□□ -0.22
SPIDR-206ENST00000518074 KRT24Q2M2I5 525 aa13.71□□□□□ -0.22
SPIDR-206ENST00000518074 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.71□□□□□ -0.22
SPIDR-206ENST00000518074 NRXN2Q9P2S2 1712 aa13.7□□□□□ -0.22
SPIDR-206ENST00000518074 VAMP4O75379 141 aa13.7□□□□□ -0.22
SPIDR-206ENST00000518074 YBX3P16989 372 aaKnown RBP eCLIP13.7□□□□□ -0.22
SPIDR-206ENST00000518074 GNAI1P63096 354 aa13.7□□□□□ -0.22
SPIDR-206ENST00000518074 IL6STP40189 918 aaPredicted RBP13.7□□□□□ -0.22
SPIDR-206ENST00000518074 TWISTNBQ3B726 338 aaPredicted RBP13.7□□□□□ -0.22
SPIDR-206ENST00000518074 MIS18AQ9NYP9 233 aa13.7□□□□□ -0.22
SPIDR-206ENST00000518074 ZBTB1Q9Y2K1 713 aa13.7□□□□□ -0.22
SPIDR-206ENST00000518074 KIF16BQ96L93 1317 aa13.7□□□□□ -0.22
SPIDR-206ENST00000518074 PXDNLA1KZ92 1463 aa13.7□□□□□ -0.22
SPIDR-206ENST00000518074 IL27Q8NEV9 243 aa13.69□□□□□ -0.22
SPIDR-206ENST00000518074 SRP68Q9UHB9 627 aaKnown RBP13.69□□□□□ -0.22
SPIDR-206ENST00000518074 KDM3BQ7LBC6 1761 aa13.69□□□□□ -0.22
SPIDR-206ENST00000518074 SNRPA1P09661 255 aaKnown RBP13.68□□□□□ -0.22
SPIDR-206ENST00000518074 LNPKQ9C0E8 428 aa13.68□□□□□ -0.22
SPIDR-206ENST00000518074 BABAM1Q9NWV8 329 aa13.68□□□□□ -0.22
SPIDR-206ENST00000518074 SCN7AQ01118 1682 aa13.68□□□□□ -0.22
SPIDR-206ENST00000518074 CALD1Q05682 793 aaKnown RBP13.68□□□□□ -0.22
SPIDR-206ENST00000518074 POLRMTO00411 1230 aaKnown RBP13.68□□□□□ -0.22
SPIDR-206ENST00000518074 USPL1Q5W0Q7 1092 aa13.68□□□□□ -0.22
SPIDR-206ENST00000518074 DDR1Q08345 913 aa13.67□□□□□ -0.22
SPIDR-206ENST00000518074 ZBTB40Q9NUA8 1239 aa13.67□□□□□ -0.22
SPIDR-206ENST00000518074 IFT57Q9NWB7 429 aa13.67□□□□□ -0.22
SPIDR-206ENST00000518074 BRCA1P38398 1863 aaKnown RBP13.67□□□□□ -0.22
SPIDR-206ENST00000518074 LAMB4A4D0S4 1761 aa13.67□□□□□ -0.22
SPIDR-206ENST00000518074 UPF2Q9HAU5 1272 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms