RNA–Protein interactions for RNA: ENST00000518013.5

NSMCE2-204, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-204ENST00000518013 MAP3K15Q6ZN16 1313 aa17.13■□□□□ 0.33
NSMCE2-204ENST00000518013 CARMIL3Q8ND23 1372 aa17.13■□□□□ 0.33
NSMCE2-204ENST00000518013 DCAF8L1A6NGE4 600 aa17.12■□□□□ 0.33
NSMCE2-204ENST00000518013 TWISTNBQ3B726 338 aaPredicted RBP17.12■□□□□ 0.33
NSMCE2-204ENST00000518013 CCDC30Q5VVM6 783 aa17.12■□□□□ 0.33
NSMCE2-204ENST00000518013 TBC1D9BQ66K14 1250 aa17.12■□□□□ 0.33
NSMCE2-204ENST00000518013 SETDB2Q96T68 719 aa17.12■□□□□ 0.33
NSMCE2-204ENST00000518013 C10orf71Q711Q0 1435 aa17.12■□□□□ 0.33
NSMCE2-204ENST00000518013 ERVV-1B6SEH8 477 aa17.11■□□□□ 0.33
NSMCE2-204ENST00000518013 TTLL7Q6ZT98 887 aa17.11■□□□□ 0.33
NSMCE2-204ENST00000518013 TSPYL6Q8N831 410 aa17.11■□□□□ 0.33
NSMCE2-204ENST00000518013 ZBTB3Q9H5J0 574 aa17.11■□□□□ 0.33
NSMCE2-204ENST00000518013 HYPKQ9NX55 129 aa17.11■□□□□ 0.33
NSMCE2-204ENST00000518013 NPHP1O15259 732 aa17.1■□□□□ 0.33
NSMCE2-204ENST00000518013 SERPINB2P05120 415 aa17.1■□□□□ 0.33
NSMCE2-204ENST00000518013 AIMP1Q12904 312 aaKnown RBP17.1■□□□□ 0.33
NSMCE2-204ENST00000518013 LRP10Q7Z4F1 713 aa17.1■□□□□ 0.33
NSMCE2-204ENST00000518013 XAGE3Q8WTP9 111 aa17.1■□□□□ 0.33
NSMCE2-204ENST00000518013 STK31Q9BXU1 1019 aa17.1■□□□□ 0.33
NSMCE2-204ENST00000518013 SPINK5Q9NQ38 1064 aaPredicted RBP17.1■□□□□ 0.33
NSMCE2-204ENST00000518013 AFDNP55196 1824 aaKnown RBP17.1■□□□□ 0.33
NSMCE2-204ENST00000518013 KIF13BQ9NQT8 1826 aa17.1■□□□□ 0.33
NSMCE2-204ENST00000518013 E9PSI1 815 aa17.09■□□□□ 0.33
NSMCE2-204ENST00000518013 EXOSC9Q06265 439 aaKnown RBP17.09■□□□□ 0.33
NSMCE2-204ENST00000518013 COPS6Q7L5N1 327 aa17.09■□□□□ 0.33
NSMCE2-204ENST00000518013 NLGN2Q8NFZ4 835 aa17.09■□□□□ 0.33
NSMCE2-204ENST00000518013 NIP7Q9Y221 180 aaKnown RBP eCLIP17.09■□□□□ 0.33
NSMCE2-204ENST00000518013 NUP98P52948 1817 aa17.09■□□□□ 0.33
NSMCE2-204ENST00000518013 NRXN2Q9P2S2 1712 aa17.08■□□□□ 0.32
NSMCE2-204ENST00000518013 HLFQ16534 295 aa17.08■□□□□ 0.32
NSMCE2-204ENST00000518013 ATP10DQ9P241 1426 aa17.07■□□□□ 0.32
NSMCE2-204ENST00000518013 GIGYF2Q6Y7W6 1299 aaKnown RBP17.07■□□□□ 0.32
NSMCE2-204ENST00000518013 CNBD1Q8NA66 436 aa17.07■□□□□ 0.32
NSMCE2-204ENST00000518013 TGFB2P61812 414 aa17.06■□□□□ 0.32
NSMCE2-204ENST00000518013 HNRNPUQ00839 825 aaKnown RBP eCLIP17.06■□□□□ 0.32
NSMCE2-204ENST00000518013 HSP90AB3PQ58FF7 597 aa17.06■□□□□ 0.32
NSMCE2-204ENST00000518013 NBPF5PQ86XG9 351 aaPredicted RBP17.06■□□□□ 0.32
NSMCE2-204ENST00000518013 ST5P78524 1137 aa17.05■□□□□ 0.32
NSMCE2-204ENST00000518013 SLFN5Q08AF3 891 aa17.05■□□□□ 0.32
NSMCE2-204ENST00000518013 PELP1Q8IZL8 1130 aaKnown RBP17.05■□□□□ 0.32
NSMCE2-204ENST00000518013 PXDNLA1KZ92 1463 aa17.05■□□□□ 0.32
NSMCE2-204ENST00000518013 DDX58O95786 925 aaKnown RBP17.04■□□□□ 0.32
NSMCE2-204ENST00000518013 GPTP24298 496 aa17.04■□□□□ 0.32
NSMCE2-204ENST00000518013 PRR5LQ6MZQ0 368 aa17.04■□□□□ 0.32
NSMCE2-204ENST00000518013 ANKRD13DQ6ZTN6 518 aa17.04■□□□□ 0.32
NSMCE2-204ENST00000518013 PLBD2Q8NHP8 589 aa17.04■□□□□ 0.32
NSMCE2-204ENST00000518013 ANKRD36CQ5JPF3 1778 aa17.04■□□□□ 0.32
NSMCE2-204ENST00000518013 N4BP2Q86UW6 1770 aaPredicted RBP17.03■□□□□ 0.32
NSMCE2-204ENST00000518013 FAM177BA6PVY3 158 aa17.03■□□□□ 0.32
NSMCE2-204ENST00000518013 TCERG1O14776 1098 aaKnown RBP17.03■□□□□ 0.32
NSMCE2-204ENST00000518013 VAMP4O75379 141 aa17.03■□□□□ 0.32
NSMCE2-204ENST00000518013 GTF2E1P29083 439 aaPredicted RBP17.03■□□□□ 0.32
NSMCE2-204ENST00000518013 GPR162Q16538 588 aa17.03■□□□□ 0.32
NSMCE2-204ENST00000518013 TPTE2Q6XPS3 522 aa17.03■□□□□ 0.32
NSMCE2-204ENST00000518013 NYXQ9GZU5 481 aa17.03■□□□□ 0.32
NSMCE2-204ENST00000518013 PHAXQ9H814 394 aaKnown RBP17.03■□□□□ 0.32
NSMCE2-204ENST00000518013 KIAA1551Q9HCM1 1747 aa17.02■□□□□ 0.32
NSMCE2-204ENST00000518013 SLC4A2P04920 1241 aa17.02■□□□□ 0.32
NSMCE2-204ENST00000518013 PARP10Q53GL7 1025 aa17.02■□□□□ 0.32
NSMCE2-204ENST00000518013 RIC3Q7Z5B4 369 aa17.02■□□□□ 0.32
NSMCE2-204ENST00000518013 CDCA7LQ96GN5 454 aa17.02■□□□□ 0.32
NSMCE2-204ENST00000518013 CACNA1FO60840 1977 aa17.02■□□□□ 0.31
NSMCE2-204ENST00000518013 ARFGEF2Q9Y6D5 1785 aa17.02■□□□□ 0.31
NSMCE2-204ENST00000518013 IBTKQ9P2D0 1353 aaPredicted RBP17.02■□□□□ 0.31
NSMCE2-204ENST00000518013 A0A0G2JLW4 131 aa17.01■□□□□ 0.31
NSMCE2-204ENST00000518013 DPEP1P16444 411 aa17.01■□□□□ 0.31
NSMCE2-204ENST00000518013 PDE6BP35913 854 aa17.01■□□□□ 0.31
NSMCE2-204ENST00000518013 PPP1R42Q7Z4L9 355 aa17.01■□□□□ 0.31
NSMCE2-204ENST00000518013 ZNF34Q8IZ26 560 aa17.01■□□□□ 0.31
NSMCE2-204ENST00000518013 BRIP1Q9BX63 1249 aa17.01■□□□□ 0.31
NSMCE2-204ENST00000518013 UBN2Q6ZU65 1347 aa17■□□□□ 0.31
NSMCE2-204ENST00000518013 TCIRG1Q13488 830 aa17■□□□□ 0.31
NSMCE2-204ENST00000518013 CCDC24Q8N4L8 307 aa17■□□□□ 0.31
NSMCE2-204ENST00000518013 PDZRN3Q9UPQ7 1066 aa17■□□□□ 0.31
NSMCE2-204ENST00000518013 ANKRD31Q8N7Z5 1873 aa16.99■□□□□ 0.31
NSMCE2-204ENST00000518013 H0YIN7 160 aa16.99■□□□□ 0.31
NSMCE2-204ENST00000518013 WWC3Q9ULE0 1092 aa16.99■□□□□ 0.31
NSMCE2-204ENST00000518013 CHRNA5P30532 468 aa16.98■□□□□ 0.31
NSMCE2-204ENST00000518013 FLIIQ13045 1269 aa16.98■□□□□ 0.31
NSMCE2-204ENST00000518013 SUSD4Q5VX71 490 aa16.98■□□□□ 0.31
NSMCE2-204ENST00000518013 C2CD5Q86YS7 1000 aa16.98■□□□□ 0.31
NSMCE2-204ENST00000518013 UTP14AQ9BVJ6 771 aaKnown RBP16.98■□□□□ 0.31
NSMCE2-204ENST00000518013 PIM2Q9P1W9 311 aa16.98■□□□□ 0.31
NSMCE2-204ENST00000518013 RNF123Q5XPI4 1314 aa16.97■□□□□ 0.31
NSMCE2-204ENST00000518013 DLEC1Q9Y238 1755 aa16.97■□□□□ 0.31
NSMCE2-204ENST00000518013 GRIN3BO60391 1043 aa16.97■□□□□ 0.31
NSMCE2-204ENST00000518013 FKBP5Q13451 457 aaPredicted RBP16.97■□□□□ 0.31
NSMCE2-204ENST00000518013 KSR2Q6VAB6 950 aa16.97■□□□□ 0.31
NSMCE2-204ENST00000518013 NLRP10Q86W26 655 aa16.97■□□□□ 0.31
NSMCE2-204ENST00000518013 NUTM1Q86Y26 1132 aa16.97■□□□□ 0.31
NSMCE2-204ENST00000518013 TRMT2AQ8IZ69 625 aaKnown RBP16.97■□□□□ 0.31
NSMCE2-204ENST00000518013 ZNF428Q96B54 188 aa16.97■□□□□ 0.31
NSMCE2-204ENST00000518013 BRCA1P38398 1863 aaKnown RBP16.97■□□□□ 0.31
NSMCE2-204ENST00000518013 ZBED9Q6R2W3 1325 aa16.96■□□□□ 0.31
NSMCE2-204ENST00000518013 PI4KAP2A4QPH2 592 aa16.96■□□□□ 0.31
NSMCE2-204ENST00000518013 NTSR2O95665 410 aa16.96■□□□□ 0.31
NSMCE2-204ENST00000518013 G2E3Q7L622 706 aa16.96■□□□□ 0.31
NSMCE2-204ENST00000518013 PI4KAP1Q8N8J0 262 aa16.96■□□□□ 0.31
NSMCE2-204ENST00000518013 BCS1LQ9Y276 419 aa16.96■□□□□ 0.31
NSMCE2-204ENST00000518013 MAP3K2Q9Y2U5 619 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms