RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 TMEM2Q9UHN6 1383 aa5.65□□□□□ -1.51
CPNE3-204ENST00000517862 DCCP43146 1447 aa5.65□□□□□ -1.51
CPNE3-204ENST00000517862 CICQ96RK0 1608 aaPredicted RBP5.64□□□□□ -1.51
CPNE3-204ENST00000517862 SZT2Q5T011 3432 aa5.64□□□□□ -1.51
CPNE3-204ENST00000517862 ABCA3Q99758 1704 aa5.64□□□□□ -1.51
CPNE3-204ENST00000517862 PLCH1Q4KWH8 1693 aa5.63□□□□□ -1.51
CPNE3-204ENST00000517862 NWD2Q9ULI1 1742 aa5.63□□□□□ -1.51
CPNE3-204ENST00000517862 ZMYND10O75800 440 aa5.63□□□□□ -1.51
CPNE3-204ENST00000517862 THAP11Q96EK4 314 aa5.63□□□□□ -1.51
CPNE3-204ENST00000517862 MCOLN1Q9GZU1 580 aa5.63□□□□□ -1.51
CPNE3-204ENST00000517862 PRAG1Q86YV5 1406 aa5.63□□□□□ -1.51
CPNE3-204ENST00000517862 LAMC1P11047 1609 aa5.63□□□□□ -1.51
CPNE3-204ENST00000517862 POLD1P28340 1107 aa5.62□□□□□ -1.51
CPNE3-204ENST00000517862 CAMK2BQ13554 666 aa5.62□□□□□ -1.51
CPNE3-204ENST00000517862 LYPD4Q6UWN0 246 aa5.62□□□□□ -1.51
CPNE3-204ENST00000517862 RPRD2Q5VT52 1461 aaKnown RBP5.62□□□□□ -1.51
CPNE3-204ENST00000517862 CDC42BPBQ9Y5S2 1711 aa5.62□□□□□ -1.51
CPNE3-204ENST00000517862 RGPD3A6NKT7 1758 aaPredicted RBP5.61□□□□□ -1.51
CPNE3-204ENST00000517862 SLC10A3P09131 477 aa5.61□□□□□ -1.51
CPNE3-204ENST00000517862 FECHP22830 423 aa5.61□□□□□ -1.51
CPNE3-204ENST00000517862 ERVK-7P63135 1459 aa5.61□□□□□ -1.51
CPNE3-204ENST00000517862 SKOR1P84550 965 aa5.61□□□□□ -1.51
CPNE3-204ENST00000517862 SLC15A2Q16348 729 aa5.61□□□□□ -1.51
CPNE3-204ENST00000517862 RGPD4Q7Z3J3 1758 aa5.61□□□□□ -1.51
CPNE3-204ENST00000517862 NANOS1Q8WY41 292 aaKnown RBP5.61□□□□□ -1.51
CPNE3-204ENST00000517862 ZFP64Q9NPA5 681 aa5.61□□□□□ -1.51
CPNE3-204ENST00000517862 RAPGEFL1Q9UHV5 662 aa5.61□□□□□ -1.51
CPNE3-204ENST00000517862 THSD7AQ9UPZ6 1657 aa5.6□□□□□ -1.51
CPNE3-204ENST00000517862 SYCP2Q9BX26 1530 aa5.6□□□□□ -1.51
CPNE3-204ENST00000517862 PRIM1P49642 420 aaKnown RBP5.6□□□□□ -1.51
CPNE3-204ENST00000517862 PDIA6Q15084 440 aa5.6□□□□□ -1.51
CPNE3-204ENST00000517862 MSS51Q4VC12 460 aa5.6□□□□□ -1.51
CPNE3-204ENST00000517862 RBM26Q5T8P6 1007 aaKnown RBP5.6□□□□□ -1.51
CPNE3-204ENST00000517862 KIF3BO15066 747 aa5.59□□□□□ -1.51
CPNE3-204ENST00000517862 MLLT3P42568 568 aaPredicted RBP5.59□□□□□ -1.51
CPNE3-204ENST00000517862 RSPH4AQ5TD94 716 aa5.59□□□□□ -1.51
CPNE3-204ENST00000517862 EHBP1Q8NDI1 1231 aa5.59□□□□□ -1.51
CPNE3-204ENST00000517862 PMFBP1Q8TBY8 1022 aa5.59□□□□□ -1.51
CPNE3-204ENST00000517862 ADGRB3O60242 1522 aa5.58□□□□□ -1.52
CPNE3-204ENST00000517862 PLSCR1O15162 318 aa5.58□□□□□ -1.52
CPNE3-204ENST00000517862 SEMA6BQ9H3T3 888 aa5.58□□□□□ -1.52
CPNE3-204ENST00000517862 TRIOBPQ9H2D6 2365 aa5.58□□□□□ -1.52
CPNE3-204ENST00000517862 ADGRL3Q9HAR2 1447 aa5.57□□□□□ -1.52
CPNE3-204ENST00000517862 UNC80Q8N2C7 3258 aa5.57□□□□□ -1.52
CPNE3-204ENST00000517862 GRXCR2A6NFK2 248 aa5.57□□□□□ -1.52
CPNE3-204ENST00000517862 SPDYE16A6NNV3 312 aaPredicted RBP5.57□□□□□ -1.52
CPNE3-204ENST00000517862 SIAH2O43255 324 aa5.57□□□□□ -1.52
CPNE3-204ENST00000517862 CELA2BP08218 269 aaPredicted RBP5.57□□□□□ -1.52
CPNE3-204ENST00000517862 ITGB7P26010 798 aa5.57□□□□□ -1.52
CPNE3-204ENST00000517862 MORN1Q5T089 497 aa5.57□□□□□ -1.52
CPNE3-204ENST00000517862 SMYD5Q6GMV2 418 aa5.57□□□□□ -1.52
CPNE3-204ENST00000517862 KRTAP5-3Q6L8H2 238 aa5.57□□□□□ -1.52
CPNE3-204ENST00000517862 BARGINQ6ZT62 677 aa5.57□□□□□ -1.52
CPNE3-204ENST00000517862 GPIHBP1Q8IV16 184 aa5.57□□□□□ -1.52
CPNE3-204ENST00000517862 INO80Q9ULG1 1556 aaPredicted RBP5.57□□□□□ -1.52
CPNE3-204ENST00000517862 VIRMAQ69YN4 1812 aaKnown RBP5.57□□□□□ -1.52
CPNE3-204ENST00000517862 CNTNAP1P78357 1384 aa5.56□□□□□ -1.52
CPNE3-204ENST00000517862 PIK3C2BO00750 1634 aa5.56□□□□□ -1.52
CPNE3-204ENST00000517862 PTPN23Q9H3S7 1636 aa5.56□□□□□ -1.52
CPNE3-204ENST00000517862 TXKP42681 527 aa5.56□□□□□ -1.52
CPNE3-204ENST00000517862 PDE3BQ13370 1112 aa5.56□□□□□ -1.52
CPNE3-204ENST00000517862 DGKZQ13574 1117 aa5.56□□□□□ -1.52
CPNE3-204ENST00000517862 C6orf118Q5T5N4 469 aa5.56□□□□□ -1.52
CPNE3-204ENST00000517862 IL27Q8NEV9 243 aa5.56□□□□□ -1.52
CPNE3-204ENST00000517862 ORAI2Q96SN7 254 aa5.56□□□□□ -1.52
CPNE3-204ENST00000517862 RRAGCQ9HB90 399 aa5.56□□□□□ -1.52
CPNE3-204ENST00000517862 SALL2Q9Y467 1007 aaPredicted RBP5.56□□□□□ -1.52
CPNE3-204ENST00000517862 PXDNLA1KZ92 1463 aa5.56□□□□□ -1.52
CPNE3-204ENST00000517862 NOS1P29475 1434 aa5.56□□□□□ -1.52
CPNE3-204ENST00000517862 CASP8AP2Q9UKL3 1982 aa5.55□□□□□ -1.52
CPNE3-204ENST00000517862 KRBA1A5PL33 1030 aa5.55□□□□□ -1.52
CPNE3-204ENST00000517862 ARTNQ5T4W7 220 aa5.55□□□□□ -1.52
CPNE3-204ENST00000517862 ALYREFQ86V81 257 aaKnown RBP5.55□□□□□ -1.52
CPNE3-204ENST00000517862 KRI1Q8N9T8 703 aaKnown RBP5.55□□□□□ -1.52
CPNE3-204ENST00000517862 NEDD1Q8NHV4 660 aa5.55□□□□□ -1.52
CPNE3-204ENST00000517862 KRTAP4-11Q9BYQ6 195 aa5.55□□□□□ -1.52
CPNE3-204ENST00000517862 TOPAZ1Q8N9V7 1692 aa5.55□□□□□ -1.52
CPNE3-204ENST00000517862 C10orf71Q711Q0 1435 aa5.55□□□□□ -1.52
CPNE3-204ENST00000517862 PREX2Q70Z35 1606 aa5.55□□□□□ -1.52
CPNE3-204ENST00000517862 BAHCC1Q9P281 2608 aa5.55□□□□□ -1.52
CPNE3-204ENST00000517862 NRAPQ86VF7 1730 aa5.54□□□□□ -1.52
CPNE3-204ENST00000517862 SPATA31A5Q5VU36 1347 aa5.54□□□□□ -1.52
CPNE3-204ENST00000517862 SPATA31A7Q8IWB4 1347 aa5.54□□□□□ -1.52
CPNE3-204ENST00000517862 KDM2BQ8NHM5 1336 aa5.54□□□□□ -1.52
CPNE3-204ENST00000517862 ARID1BQ8NFD5 2236 aaPredicted RBP5.54□□□□□ -1.52
CPNE3-204ENST00000517862 C1orf167Q5SNV9 1468 aa5.54□□□□□ -1.52
CPNE3-204ENST00000517862 ADH1CP00326 375 aa5.54□□□□□ -1.52
CPNE3-204ENST00000517862 MAP2K1Q02750 393 aaPredicted RBP5.54□□□□□ -1.52
CPNE3-204ENST00000517862 SRSF11Q05519 484 aaKnown RBP5.54□□□□□ -1.52
CPNE3-204ENST00000517862 AK7Q96M32 723 aa5.54□□□□□ -1.52
CPNE3-204ENST00000517862 NALCNQ8IZF0 1738 aa5.54□□□□□ -1.52
CPNE3-204ENST00000517862 UPP2O95045 317 aa5.53□□□□□ -1.52
CPNE3-204ENST00000517862 WDR4P57081 412 aaKnown RBP5.53□□□□□ -1.52
CPNE3-204ENST00000517862 XPCQ01831 940 aaPredicted RBP5.53□□□□□ -1.52
CPNE3-204ENST00000517862 FZD5Q13467 585 aa5.53□□□□□ -1.52
CPNE3-204ENST00000517862 CCDC24Q8N4L8 307 aa5.53□□□□□ -1.52
CPNE3-204ENST00000517862 KRTAP4-5Q9BYR2 181 aa5.53□□□□□ -1.52
CPNE3-204ENST00000517862 KDM4CQ9H3R0 1056 aa5.53□□□□□ -1.52
CPNE3-204ENST00000517862 ZNF777Q9ULD5 760 aaPredicted RBP5.53□□□□□ -1.52
CPNE3-204ENST00000517862 TBX22Q9Y458 520 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms