RNA–Protein interactions for RNA: ENST00000517785.1

LINC00535-202, long intergenic non-protein coding RNA 535, humanhuman

TSL 3 BASIC

Gene LINC00535, Length 264 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-202ENST00000517785 RGPD2P0DJD1 1756 aa8.18□□□□□ -1.1
LINC00535-202ENST00000517785 ARHGAP27Q6ZUM4 889 aa8.18□□□□□ -1.1
LINC00535-202ENST00000517785 CDCA7LQ96GN5 454 aa8.18□□□□□ -1.1
LINC00535-202ENST00000517785 FAM198AQ9UFP1 575 aa8.18□□□□□ -1.1
LINC00535-202ENST00000517785 UBR3Q6ZT12 1888 aa8.17□□□□□ -1.1
LINC00535-202ENST00000517785 GRXCR2A6NFK2 248 aa8.17□□□□□ -1.1
LINC00535-202ENST00000517785 KCNC4Q03721 635 aa8.17□□□□□ -1.1
LINC00535-202ENST00000517785 FSTL1Q12841 308 aa8.17□□□□□ -1.1
LINC00535-202ENST00000517785 NME9Q86XW9 330 aa8.17□□□□□ -1.1
LINC00535-202ENST00000517785 AK7Q96M32 723 aa8.17□□□□□ -1.1
LINC00535-202ENST00000517785 RTN4Q9NQC3 1192 aaKnown RBP8.17□□□□□ -1.1
LINC00535-202ENST00000517785 WDR70Q9NW82 654 aa8.17□□□□□ -1.1
LINC00535-202ENST00000517785 TTC21AQ8NDW8 1320 aa8.17□□□□□ -1.1
LINC00535-202ENST00000517785 KTN1Q86UP2 1357 aaKnown RBP8.17□□□□□ -1.1
LINC00535-202ENST00000517785 PXDNLA1KZ92 1463 aa8.17□□□□□ -1.1
LINC00535-202ENST00000517785 C4BP0C0L5 1744 aa8.17□□□□□ -1.1
LINC00535-202ENST00000517785 PKD1L3Q7Z443 1732 aa8.17□□□□□ -1.1
LINC00535-202ENST00000517785 KIAA1551Q9HCM1 1747 aa8.17□□□□□ -1.1
LINC00535-202ENST00000517785 KIAA1210Q9ULL0 1709 aa8.17□□□□□ -1.1
LINC00535-202ENST00000517785 A0A0G2JLW4 131 aa8.16□□□□□ -1.1
LINC00535-202ENST00000517785 SMAPO00193 183 aa8.16□□□□□ -1.1
LINC00535-202ENST00000517785 MEGF6O75095 1541 aa8.16□□□□□ -1.1
LINC00535-202ENST00000517785 PRSS12P56730 875 aa8.16□□□□□ -1.1
LINC00535-202ENST00000517785 C9orf131Q5VYM1 1079 aa8.16□□□□□ -1.1
LINC00535-202ENST00000517785 RRAGCQ9HB90 399 aa8.16□□□□□ -1.1
LINC00535-202ENST00000517785 MON2Q7Z3U7 1717 aa8.15□□□□□ -1.1
LINC00535-202ENST00000517785 PALLDQ8WX93 1383 aa8.15□□□□□ -1.1
LINC00535-202ENST00000517785 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.15□□□□□ -1.1
LINC00535-202ENST00000517785 FCHSD2O94868 740 aa8.15□□□□□ -1.1
LINC00535-202ENST00000517785 FLAD1Q8NFF5 587 aa8.15□□□□□ -1.1
LINC00535-202ENST00000517785 FAM208AQ9UK61 1670 aaKnown RBP8.14□□□□□ -1.11
LINC00535-202ENST00000517785 EVC2Q86UK5 1308 aa8.14□□□□□ -1.11
LINC00535-202ENST00000517785 C3orf80F5H4A9 247 aa8.14□□□□□ -1.11
LINC00535-202ENST00000517785 OSBPP22059 807 aa8.14□□□□□ -1.11
LINC00535-202ENST00000517785 FAM161AQ3B820 660 aa8.14□□□□□ -1.11
LINC00535-202ENST00000517785 ZCRB1Q8TBF4 217 aaKnown RBP8.14□□□□□ -1.11
LINC00535-202ENST00000517785 KIF13BQ9NQT8 1826 aa8.14□□□□□ -1.11
LINC00535-202ENST00000517785 BRCA1P38398 1863 aaKnown RBP8.13□□□□□ -1.11
LINC00535-202ENST00000517785 RAB3GAP2Q9H2M9 1393 aa8.13□□□□□ -1.11
LINC00535-202ENST00000517785 MMP10P09238 476 aa8.13□□□□□ -1.11
LINC00535-202ENST00000517785 DPEP1P16444 411 aa8.13□□□□□ -1.11
LINC00535-202ENST00000517785 PPP4CP60510 307 aa8.13□□□□□ -1.11
LINC00535-202ENST00000517785 MPRIPQ6WCQ1 1025 aa8.13□□□□□ -1.11
LINC00535-202ENST00000517785 SAMD7Q7Z3H4 446 aa8.13□□□□□ -1.11
LINC00535-202ENST00000517785 USHBP1Q8N6Y0 703 aa8.13□□□□□ -1.11
LINC00535-202ENST00000517785 SMC1BQ8NDV3 1235 aa8.13□□□□□ -1.11
LINC00535-202ENST00000517785 TATDN2Q93075 761 aa8.13□□□□□ -1.11
LINC00535-202ENST00000517785 CDHR5Q9HBB8 845 aa8.13□□□□□ -1.11
LINC00535-202ENST00000517785 RNF181Q9P0P0 153 aa8.13□□□□□ -1.11
LINC00535-202ENST00000517785 TNRC6CQ9HCJ0 1690 aaKnown RBP8.13□□□□□ -1.11
LINC00535-202ENST00000517785 USP31Q70CQ4 1352 aa8.12□□□□□ -1.11
LINC00535-202ENST00000517785 PLEKHG2Q9H7P9 1386 aa8.12□□□□□ -1.11
LINC00535-202ENST00000517785 KDM2BQ8NHM5 1336 aa8.12□□□□□ -1.11
LINC00535-202ENST00000517785 ITGB4P16144 1822 aa8.12□□□□□ -1.11
LINC00535-202ENST00000517785 SBF1O95248 1867 aa8.11□□□□□ -1.11
LINC00535-202ENST00000517785 ARFGEF1Q9Y6D6 1849 aa8.11□□□□□ -1.11
LINC00535-202ENST00000517785 NBPF26B4DH59 902 aa8.11□□□□□ -1.11
LINC00535-202ENST00000517785 FBLN1P23142 703 aa8.11□□□□□ -1.11
LINC00535-202ENST00000517785 LINC00116Q8NCU8 138 aa8.11□□□□□ -1.11
LINC00535-202ENST00000517785 IP6K1Q92551 441 aa8.11□□□□□ -1.11
LINC00535-202ENST00000517785 MKRN1Q9UHC7 482 aaKnown RBP8.11□□□□□ -1.11
LINC00535-202ENST00000517785 PNMA3Q9UL41 463 aa8.11□□□□□ -1.11
LINC00535-202ENST00000517785 C10orf71Q711Q0 1435 aa8.11□□□□□ -1.11
LINC00535-202ENST00000517785 GNPATO15228 680 aa8.1□□□□□ -1.11
LINC00535-202ENST00000517785 FOXN1O15353 648 aa8.1□□□□□ -1.11
LINC00535-202ENST00000517785 SBNO2Q9Y2G9 1366 aa8.1□□□□□ -1.11
LINC00535-202ENST00000517785 SSFA2P28290 1259 aa8.09□□□□□ -1.11
LINC00535-202ENST00000517785 TGFB2P61812 414 aa8.09□□□□□ -1.11
LINC00535-202ENST00000517785 RASSF7Q02833 373 aa8.09□□□□□ -1.11
LINC00535-202ENST00000517785 TMC1Q8TDI8 760 aa8.09□□□□□ -1.11
LINC00535-202ENST00000517785 RBM27Q9P2N5 1060 aaKnown RBP8.09□□□□□ -1.11
LINC00535-202ENST00000517785 NSD3Q9BZ95 1437 aa8.09□□□□□ -1.11
LINC00535-202ENST00000517785 MAP2P11137 1827 aaKnown RBP8.08□□□□□ -1.12
LINC00535-202ENST00000517785 CD163L1Q9NR16 1453 aa8.08□□□□□ -1.12
LINC00535-202ENST00000517785 HOXC9P31274 260 aa8.08□□□□□ -1.12
LINC00535-202ENST00000517785 AMPHP49418 695 aa8.08□□□□□ -1.12
LINC00535-202ENST00000517785 TJAP1Q5JTD0 557 aa8.08□□□□□ -1.12
LINC00535-202ENST00000517785 NUDT18Q6ZVK8 323 aa8.08□□□□□ -1.12
LINC00535-202ENST00000517785 C4AP0C0L4 1744 aa8.08□□□□□ -1.12
LINC00535-202ENST00000517785 PDE4DIPQ5VU43 2346 aa8.08□□□□□ -1.12
LINC00535-202ENST00000517785 MAP3K19Q56UN5 1328 aa8.07□□□□□ -1.12
LINC00535-202ENST00000517785 CCDC88AQ3V6T2 1871 aa8.07□□□□□ -1.12
LINC00535-202ENST00000517785 ITPK1Q13572 414 aa8.07□□□□□ -1.12
LINC00535-202ENST00000517785 NBPF6Q5VWK0 638 aa8.07□□□□□ -1.12
LINC00535-202ENST00000517785 TTC13Q8NBP0 860 aa8.07□□□□□ -1.12
LINC00535-202ENST00000517785 RAPGEF4Q8WZA2 1011 aa8.07□□□□□ -1.12
LINC00535-202ENST00000517785 NBPF4Q96M43 638 aa8.07□□□□□ -1.12
LINC00535-202ENST00000517785 CCDC87Q9NVE4 849 aa8.07□□□□□ -1.12
LINC00535-202ENST00000517785 PCDH11XQ9BZA7 1347 aa8.06□□□□□ -1.12
LINC00535-202ENST00000517785 PCDH11YQ9BZA8 1340 aa8.06□□□□□ -1.12
LINC00535-202ENST00000517785 LOC102724428A0A0B4J2F2 783 aa8.06□□□□□ -1.12
LINC00535-202ENST00000517785 TATP17735 454 aaPredicted RBP8.06□□□□□ -1.12
LINC00535-202ENST00000517785 KCNA3P22001 575 aa8.06□□□□□ -1.12
LINC00535-202ENST00000517785 CHRNA5P30532 468 aa8.06□□□□□ -1.12
LINC00535-202ENST00000517785 SIK1P57059 783 aa8.06□□□□□ -1.12
LINC00535-202ENST00000517785 DALRD3Q5D0E6 543 aaKnown RBP8.06□□□□□ -1.12
LINC00535-202ENST00000517785 PIGBQ92521 554 aa8.06□□□□□ -1.12
LINC00535-202ENST00000517785 SMARCC1Q92922 1105 aaPredicted RBP8.06□□□□□ -1.12
LINC00535-202ENST00000517785 ABHD8Q96I13 439 aa8.06□□□□□ -1.12
LINC00535-202ENST00000517785 DCAF5Q96JK2 942 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms