RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 RIMBP3BA6NNM3 1639 aa7.83□□□□□ -1.16
CPNE3-203ENST00000517490 RIMBP3Q9UFD9 1639 aa7.83□□□□□ -1.16
CPNE3-203ENST00000517490 RTL1A6NKG5 1358 aa7.83□□□□□ -1.16
CPNE3-203ENST00000517490 KIAA0232Q92628 1395 aa7.83□□□□□ -1.16
CPNE3-203ENST00000517490 CHL1O00533 1208 aa7.83□□□□□ -1.16
CPNE3-203ENST00000517490 DHX16O60231 1041 aaKnown RBP7.83□□□□□ -1.16
CPNE3-203ENST00000517490 NLRP6P59044 892 aa7.83□□□□□ -1.16
CPNE3-203ENST00000517490 TRIM29Q14134 588 aa7.83□□□□□ -1.16
CPNE3-203ENST00000517490 CD109Q6YHK3 1445 aa7.83□□□□□ -1.16
CPNE3-203ENST00000517490 C17orf53Q8N3J3 647 aaPredicted RBP7.83□□□□□ -1.16
CPNE3-203ENST00000517490 FMNL2Q96PY5 1086 aa7.83□□□□□ -1.16
CPNE3-203ENST00000517490 DACT1Q9NYF0 836 aa7.83□□□□□ -1.16
CPNE3-203ENST00000517490 REREQ9P2R6 1566 aa7.83□□□□□ -1.16
CPNE3-203ENST00000517490 NPHP3Q7Z494 1330 aa7.82□□□□□ -1.16
CPNE3-203ENST00000517490 IQGAP1P46940 1657 aa7.82□□□□□ -1.16
CPNE3-203ENST00000517490 RGS12O14924 1447 aa7.82□□□□□ -1.16
CPNE3-203ENST00000517490 FAM135BQ49AJ0 1406 aa7.82□□□□□ -1.16
CPNE3-203ENST00000517490 RAPGEF3O95398 923 aa7.82□□□□□ -1.16
CPNE3-203ENST00000517490 CYP2E1P05181 493 aaPredicted RBP7.82□□□□□ -1.16
CPNE3-203ENST00000517490 HSP90B2PQ58FF3 399 aa7.82□□□□□ -1.16
CPNE3-203ENST00000517490 TIGD1Q96MW7 591 aa7.82□□□□□ -1.16
CPNE3-203ENST00000517490 TFIP11Q9UBB9 837 aaKnown RBP7.82□□□□□ -1.16
CPNE3-203ENST00000517490 YTHDC2Q9H6S0 1430 aaKnown RBP7.82□□□□□ -1.16
CPNE3-203ENST00000517490 NEO1Q92859 1461 aa7.82□□□□□ -1.16
CPNE3-203ENST00000517490 FAM177BA6PVY3 158 aa7.82□□□□□ -1.16
CPNE3-203ENST00000517490 TUBB4AP04350 444 aa7.82□□□□□ -1.16
CPNE3-203ENST00000517490 HSPA4P34932 840 aa7.82□□□□□ -1.16
CPNE3-203ENST00000517490 RIC3Q7Z5B4 369 aa7.82□□□□□ -1.16
CPNE3-203ENST00000517490 ZSCAN16Q9H4T2 348 aaPredicted RBP7.82□□□□□ -1.16
CPNE3-203ENST00000517490 SOS1Q07889 1333 aaPredicted RBP7.82□□□□□ -1.16
CPNE3-203ENST00000517490 NPATQ14207 1427 aa7.82□□□□□ -1.16
CPNE3-203ENST00000517490 KRT24Q2M2I5 525 aa7.81□□□□□ -1.16
CPNE3-203ENST00000517490 PSMD1Q99460 953 aa7.81□□□□□ -1.16
CPNE3-203ENST00000517490 HMG20BQ9P0W2 317 aa7.81□□□□□ -1.16
CPNE3-203ENST00000517490 SERPINC1P01008 464 aa7.81□□□□□ -1.16
CPNE3-203ENST00000517490 SKILP12757 684 aa7.81□□□□□ -1.16
CPNE3-203ENST00000517490 EIF4A2Q14240 407 aaKnown RBP7.81□□□□□ -1.16
CPNE3-203ENST00000517490 DNAAF4Q8WXU2 420 aa7.81□□□□□ -1.16
CPNE3-203ENST00000517490 NOL10Q9BSC4 688 aaKnown RBP7.81□□□□□ -1.16
CPNE3-203ENST00000517490 TTC41PQ6P2S7 1318 aa7.81□□□□□ -1.16
CPNE3-203ENST00000517490 ZNF853P0CG23 659 aa7.81□□□□□ -1.16
CPNE3-203ENST00000517490 U2AF2P26368 475 aaKnown RBP eCLIP7.81□□□□□ -1.16
CPNE3-203ENST00000517490 SNW1Q13573 536 aaKnown RBP7.81□□□□□ -1.16
CPNE3-203ENST00000517490 JMYQ8N9B5 988 aa7.81□□□□□ -1.16
CPNE3-203ENST00000517490 CCDC150Q8NCX0 1101 aa7.81□□□□□ -1.16
CPNE3-203ENST00000517490 TRMT1Q9NXH9 659 aaKnown RBP7.81□□□□□ -1.16
CPNE3-203ENST00000517490 RAD50Q92878 1312 aa7.81□□□□□ -1.16
CPNE3-203ENST00000517490 SLU7O95391 586 aaKnown RBP7.81□□□□□ -1.16
CPNE3-203ENST00000517490 LEKR1Q6ZMV7 388 aa7.81□□□□□ -1.16
CPNE3-203ENST00000517490 PDILTQ8N807 584 aa7.81□□□□□ -1.16
CPNE3-203ENST00000517490 NECAB1Q8N987 351 aa7.81□□□□□ -1.16
CPNE3-203ENST00000517490 SNX14Q9Y5W7 946 aa7.81□□□□□ -1.16
CPNE3-203ENST00000517490 SPHKAPQ2M3C7 1700 aa7.81□□□□□ -1.16
CPNE3-203ENST00000517490 KIF1BO60333 1816 aa7.81□□□□□ -1.16
CPNE3-203ENST00000517490 TRDNQ13061 729 aa7.8□□□□□ -1.16
CPNE3-203ENST00000517490 DDX54Q8TDD1 881 aaKnown RBP7.8□□□□□ -1.16
CPNE3-203ENST00000517490 DDX11Q96FC9 970 aa7.8□□□□□ -1.16
CPNE3-203ENST00000517490 UGGT1Q9NYU2 1555 aa7.8□□□□□ -1.16
CPNE3-203ENST00000517490 EDC4Q6P2E9 1401 aaKnown RBP7.8□□□□□ -1.16
CPNE3-203ENST00000517490 SGSM2O43147 1006 aa7.8□□□□□ -1.16
CPNE3-203ENST00000517490 ZSCAN12O43309 604 aa7.8□□□□□ -1.16
CPNE3-203ENST00000517490 TMCO4Q5TGY1 634 aa7.8□□□□□ -1.16
CPNE3-203ENST00000517490 LUZP1Q86V48 1076 aa7.8□□□□□ -1.16
CPNE3-203ENST00000517490 TSC1Q92574 1164 aa7.8□□□□□ -1.16
CPNE3-203ENST00000517490 ERCC4Q92889 916 aaPredicted RBP7.8□□□□□ -1.16
CPNE3-203ENST00000517490 DNAJC2Q99543 621 aaKnown RBP7.8□□□□□ -1.16
CPNE3-203ENST00000517490 DNAJC25Q9H1X3 360 aa7.8□□□□□ -1.16
CPNE3-203ENST00000517490 CDC42BPBQ9Y5S2 1711 aa7.8□□□□□ -1.16
CPNE3-203ENST00000517490 RALYLQ86SE5 291 aaKnown RBP7.8□□□□□ -1.16
CPNE3-203ENST00000517490 DHX37Q8IY37 1157 aaKnown RBP7.8□□□□□ -1.16
CPNE3-203ENST00000517490 CHAMP1Q96JM3 812 aa7.8□□□□□ -1.16
CPNE3-203ENST00000517490 PLEKHO1Q53GL0 409 aaPredicted RBP7.8□□□□□ -1.16
CPNE3-203ENST00000517490 TAF7LQ5H9L4 462 aa7.8□□□□□ -1.16
CPNE3-203ENST00000517490 PALD1Q9ULE6 856 aa7.8□□□□□ -1.16
CPNE3-203ENST00000517490 AIMP1Q12904 312 aaKnown RBP7.79□□□□□ -1.16
CPNE3-203ENST00000517490 TSR1Q2NL82 804 aaKnown RBP7.79□□□□□ -1.16
CPNE3-203ENST00000517490 CCDC70Q6NSX1 233 aa7.79□□□□□ -1.16
CPNE3-203ENST00000517490 RUFY3Q7L099 469 aa7.79□□□□□ -1.16
CPNE3-203ENST00000517490 CCAR1Q8IX12 1150 aaKnown RBP7.79□□□□□ -1.16
CPNE3-203ENST00000517490 NSFL1CQ9UNZ2 370 aaKnown RBP7.79□□□□□ -1.16
CPNE3-203ENST00000517490 RBM8AQ9Y5S9 174 aaKnown RBP7.79□□□□□ -1.16
CPNE3-203ENST00000517490 U3KPZ7 1027 aaPredicted RBP7.79□□□□□ -1.16
CPNE3-203ENST00000517490 ZNF75DP51815 510 aa7.79□□□□□ -1.16
CPNE3-203ENST00000517490 ERO1AQ96HE7 468 aa7.79□□□□□ -1.16
CPNE3-203ENST00000517490 MED14O60244 1454 aa7.79□□□□□ -1.16
CPNE3-203ENST00000517490 POGZQ7Z3K3 1410 aa7.79□□□□□ -1.16
CPNE3-203ENST00000517490 ERLIN1O75477 346 aa7.79□□□□□ -1.16
CPNE3-203ENST00000517490 EIF3JO75822 258 aaKnown RBP7.79□□□□□ -1.16
CPNE3-203ENST00000517490 FSIP1Q8NA03 581 aa7.79□□□□□ -1.16
CPNE3-203ENST00000517490 TMEM87AQ8NBN3 555 aa7.79□□□□□ -1.16
CPNE3-203ENST00000517490 ANKRD20A12PQ8NF67 263 aa7.79□□□□□ -1.16
CPNE3-203ENST00000517490 CREBRFQ8IUR6 639 aa7.79□□□□□ -1.16
CPNE3-203ENST00000517490 SIL1Q9H173 461 aa7.79□□□□□ -1.16
CPNE3-203ENST00000517490 ZDHHC9Q9Y397 364 aa7.79□□□□□ -1.16
CPNE3-203ENST00000517490 ZFYVE16Q7Z3T8 1539 aa7.78□□□□□ -1.16
CPNE3-203ENST00000517490 ABCA6Q8N139 1617 aa7.78□□□□□ -1.16
CPNE3-203ENST00000517490 SAFBQ15424 915 aaKnown RBP eCLIP7.78□□□□□ -1.16
CPNE3-203ENST00000517490 G2E3Q7L622 706 aa7.78□□□□□ -1.16
CPNE3-203ENST00000517490 KIAA1524Q8TCG1 905 aa7.78□□□□□ -1.16
CPNE3-203ENST00000517490 NEUROD6Q96NK8 337 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms