RNA–Protein interactions for RNA: ENST00000517354.5

CPNE3-201, Transcript of copine 3, humanhuman

TSL 4

Gene CPNE3, Length 566 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-201ENST00000517354 NLRP8Q86W28 1048 aa10.44□□□□□ -0.74
CPNE3-201ENST00000517354 TRIM22Q8IYM9 498 aa10.44□□□□□ -0.74
CPNE3-201ENST00000517354 VWA5B2Q8N398 1253 aa10.44□□□□□ -0.74
CPNE3-201ENST00000517354 ATP4AP20648 1035 aa10.43□□□□□ -0.74
CPNE3-201ENST00000517354 BRD2P25440 801 aaKnown RBP10.43□□□□□ -0.74
CPNE3-201ENST00000517354 DBN1Q16643 649 aa10.43□□□□□ -0.74
CPNE3-201ENST00000517354 FIGNL1Q6PIW4 674 aa10.43□□□□□ -0.74
CPNE3-201ENST00000517354 MYO19Q96H55 970 aa10.43□□□□□ -0.74
CPNE3-201ENST00000517354 SAP130Q9H0E3 1048 aa10.43□□□□□ -0.74
CPNE3-201ENST00000517354 CRISPLD1Q9H336 500 aa10.43□□□□□ -0.74
CPNE3-201ENST00000517354 QTRT2Q9H974 415 aaKnown RBP10.43□□□□□ -0.74
CPNE3-201ENST00000517354 KLK14Q9P0G3 267 aa10.43□□□□□ -0.74
CPNE3-201ENST00000517354 ZBTB7CA1YPR0 619 aa10.42□□□□□ -0.74
CPNE3-201ENST00000517354 VEGFBP49765 207 aa10.42□□□□□ -0.74
CPNE3-201ENST00000517354 IFT43Q96FT9 208 aa10.42□□□□□ -0.74
CPNE3-201ENST00000517354 SUSD3Q96L08 255 aa10.42□□□□□ -0.74
CPNE3-201ENST00000517354 TRERF1Q96PN7 1200 aa10.42□□□□□ -0.74
CPNE3-201ENST00000517354 RANGAP1P46060 587 aaPredicted RBP10.41□□□□□ -0.74
CPNE3-201ENST00000517354 AAMPQ13685 434 aa10.41□□□□□ -0.74
CPNE3-201ENST00000517354 NPAS3Q8IXF0 933 aa10.41□□□□□ -0.74
CPNE3-201ENST00000517354 STIM2Q9P246 746 aa10.41□□□□□ -0.74
CPNE3-201ENST00000517354 FKBP4Q02790 459 aaKnown RBP eCLIP10.4□□□□□ -0.74
CPNE3-201ENST00000517354 TXNDC2Q86VQ3 553 aa10.4□□□□□ -0.74
CPNE3-201ENST00000517354 GTPBP3Q969Y2 492 aaKnown RBP10.4□□□□□ -0.74
CPNE3-201ENST00000517354 CEP63Q96MT8 703 aa10.4□□□□□ -0.74
CPNE3-201ENST00000517354 ZCCHC2Q9C0B9 1178 aaKnown RBP10.4□□□□□ -0.74
CPNE3-201ENST00000517354 ANO2Q9NQ90 1003 aa10.4□□□□□ -0.74
CPNE3-201ENST00000517354 CUEDC1Q9NWM3 386 aaPredicted RBP10.4□□□□□ -0.74
CPNE3-201ENST00000517354 LRFN2Q9ULH4 789 aa10.4□□□□□ -0.74
CPNE3-201ENST00000517354 PHF24Q9UPV7 400 aa10.4□□□□□ -0.74
CPNE3-201ENST00000517354 TERTO14746 1132 aaKnown RBP10.39□□□□□ -0.75
CPNE3-201ENST00000517354 ATXN7O15265 892 aaPredicted RBP10.39□□□□□ -0.75
CPNE3-201ENST00000517354 SF3B2Q13435 895 aaKnown RBP10.39□□□□□ -0.75
CPNE3-201ENST00000517354 HELQQ8TDG4 1101 aa10.39□□□□□ -0.75
CPNE3-201ENST00000517354 C7orf43Q8WVR3 580 aa10.39□□□□□ -0.75
CPNE3-201ENST00000517354 HSH2DQ96JZ2 352 aa10.39□□□□□ -0.75
CPNE3-201ENST00000517354 PCDHGC4Q9Y5F7 938 aa10.39□□□□□ -0.75
CPNE3-201ENST00000517354 IVNS1ABPQ9Y6Y0 642 aa10.39□□□□□ -0.75
CPNE3-201ENST00000517354 SERPINB4P48594 390 aa10.38□□□□□ -0.75
CPNE3-201ENST00000517354 ABTB2Q8N961 1025 aa10.38□□□□□ -0.75
CPNE3-201ENST00000517354 ZNF280CQ8ND82 737 aa10.38□□□□□ -0.75
CPNE3-201ENST00000517354 DNMT3AQ9Y6K1 912 aaPredicted RBP10.38□□□□□ -0.75
CPNE3-201ENST00000517354 FAM13AO94988 1023 aa10.37□□□□□ -0.75
CPNE3-201ENST00000517354 ZNF211Q13398 564 aaPredicted RBP10.37□□□□□ -0.75
CPNE3-201ENST00000517354 GLYCTKQ8IVS8 523 aa10.37□□□□□ -0.75
CPNE3-201ENST00000517354 ZNF837Q96EG3 531 aaPredicted RBP10.37□□□□□ -0.75
CPNE3-201ENST00000517354 EGFL7Q9UHF1 273 aa10.37□□□□□ -0.75
CPNE3-201ENST00000517354 GNEQ9Y223 722 aaKnown RBP10.37□□□□□ -0.75
CPNE3-201ENST00000517354 TGFBR3LH3BV60 316 aa10.36□□□□□ -0.75
CPNE3-201ENST00000517354 KHNYNO15037 678 aaKnown RBP10.36□□□□□ -0.75
CPNE3-201ENST00000517354 MICAL2O94851 1124 aa10.36□□□□□ -0.75
CPNE3-201ENST00000517354 NANOS1Q8WY41 292 aaKnown RBP10.36□□□□□ -0.75
CPNE3-201ENST00000517354 BIN2Q9UBW5 565 aaPredicted RBP10.36□□□□□ -0.75
CPNE3-201ENST00000517354 H3BM21 787 aa10.35□□□□□ -0.75
CPNE3-201ENST00000517354 MTMR3Q13615 1198 aa10.35□□□□□ -0.75
CPNE3-201ENST00000517354 NOM1Q5C9Z4 860 aaKnown RBP10.35□□□□□ -0.75
CPNE3-201ENST00000517354 ALKBH2Q6NS38 261 aa10.35□□□□□ -0.75
CPNE3-201ENST00000517354 BTLAQ7Z6A9 289 aa10.35□□□□□ -0.75
CPNE3-201ENST00000517354 TREML1Q86YW5 311 aa10.35□□□□□ -0.75
CPNE3-201ENST00000517354 TTC16Q8NEE8 873 aa10.35□□□□□ -0.75
CPNE3-201ENST00000517354 FAM13BQ9NYF5 915 aa10.35□□□□□ -0.75
CPNE3-201ENST00000517354 ICMTO60725 284 aa10.34□□□□□ -0.75
CPNE3-201ENST00000517354 EPB42P16452 691 aa10.34□□□□□ -0.75
CPNE3-201ENST00000517354 IER5Q5VY09 327 aa10.34□□□□□ -0.75
CPNE3-201ENST00000517354 IRF7Q92985 503 aa10.34□□□□□ -0.75
CPNE3-201ENST00000517354 CFHR5Q9BXR6 569 aa10.34□□□□□ -0.75
CPNE3-201ENST00000517354 DCDC2BA2VCK2 349 aa10.33□□□□□ -0.76
CPNE3-201ENST00000517354 H3BRB1 525 aa10.33□□□□□ -0.76
CPNE3-201ENST00000517354 GPR25O00155 361 aa10.33□□□□□ -0.76
CPNE3-201ENST00000517354 IDH3AP50213 366 aa10.33□□□□□ -0.76
CPNE3-201ENST00000517354 SAMD5Q5TGI4 173 aa10.33□□□□□ -0.76
CPNE3-201ENST00000517354 TUT1Q9H6E5 874 aaKnown RBP10.33□□□□□ -0.76
CPNE3-201ENST00000517354 TNFRSF10BO14763 440 aa10.32□□□□□ -0.76
CPNE3-201ENST00000517354 KLRG1Q96E93 195 aa10.32□□□□□ -0.76
CPNE3-201ENST00000517354 BRD7Q9NPI1 651 aa10.32□□□□□ -0.76
CPNE3-201ENST00000517354 ATXN7L1Q9ULK2 861 aaPredicted RBP10.32□□□□□ -0.76
CPNE3-201ENST00000517354 BCS1LQ9Y276 419 aa10.32□□□□□ -0.76
CPNE3-201ENST00000517354 BNIP3LO60238 219 aa10.31□□□□□ -0.76
CPNE3-201ENST00000517354 MAPTP10636 758 aaKnown RBP10.31□□□□□ -0.76
CPNE3-201ENST00000517354 PCSK2P16519 638 aa10.31□□□□□ -0.76
CPNE3-201ENST00000517354 MPSTP25325 297 aa10.31□□□□□ -0.76
CPNE3-201ENST00000517354 ARSDP51689 593 aa10.31□□□□□ -0.76
CPNE3-201ENST00000517354 ETFBKMTQ8IXQ9 262 aa10.31□□□□□ -0.76
CPNE3-201ENST00000517354 PIK3R5Q8WYR1 880 aa10.31□□□□□ -0.76
CPNE3-201ENST00000517354 ABHD17AQ96GS6 310 aa10.31□□□□□ -0.76
CPNE3-201ENST00000517354 GZF1Q9H116 711 aaPredicted RBP10.31□□□□□ -0.76
CPNE3-201ENST00000517354 KCNH4Q9UQ05 1017 aa10.31□□□□□ -0.76
CPNE3-201ENST00000517354 SOWAHDA6NJG2 315 aa10.3□□□□□ -0.76
CPNE3-201ENST00000517354 FAM157BP0CG42 384 aa10.3□□□□□ -0.76
CPNE3-201ENST00000517354 ZAP70P43403 619 aa10.3□□□□□ -0.76
CPNE3-201ENST00000517354 TNP2Q05952 138 aa10.3□□□□□ -0.76
CPNE3-201ENST00000517354 CMTR1Q8N1G2 835 aaKnown RBP10.3□□□□□ -0.76
CPNE3-201ENST00000517354 MARK1Q9P0L2 795 aa10.3□□□□□ -0.76
CPNE3-201ENST00000517354 NSFL1CQ9UNZ2 370 aaKnown RBP10.3□□□□□ -0.76
CPNE3-201ENST00000517354 ZBTB39O15060 712 aa10.29□□□□□ -0.76
CPNE3-201ENST00000517354 THBS1P07996 1170 aa10.29□□□□□ -0.76
CPNE3-201ENST00000517354 EIF1AXP47813 144 aaKnown RBP10.29□□□□□ -0.76
CPNE3-201ENST00000517354 LAMC2Q13753 1193 aa10.29□□□□□ -0.76
CPNE3-201ENST00000517354 RGL4Q8IZJ4 473 aa10.29□□□□□ -0.76
CPNE3-201ENST00000517354 WFS1O76024 890 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms