RNA–Protein interactions for RNA: ENST00000517325.5

CHMP7-203, Transcript of charged multivesicular body protein 7, humanhuman

TSL 2

Gene CHMP7, Length 2,639 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-203ENST00000517325 IGKV5-2P06315 115 aa20.33■□□□□ 0.85
CHMP7-203ENST00000517325 PKP1Q13835 747 aa20.33■□□□□ 0.85
CHMP7-203ENST00000517325 USP42Q9H9J4 1324 aaKnown RBP20.33■□□□□ 0.85
CHMP7-203ENST00000517325 MRC1P22897 1456 aa20.33■□□□□ 0.84
CHMP7-203ENST00000517325 CYP2E1P05181 493 aaPredicted RBP20.33■□□□□ 0.84
CHMP7-203ENST00000517325 ANAPC15P60006 121 aa20.33■□□□□ 0.84
CHMP7-203ENST00000517325 RIC3Q7Z5B4 369 aa20.32■□□□□ 0.84
CHMP7-203ENST00000517325 DCAF5Q96JK2 942 aa20.32■□□□□ 0.84
CHMP7-203ENST00000517325 BAG4O95429 457 aaKnown RBP20.32■□□□□ 0.84
CHMP7-203ENST00000517325 BICC1Q9H694 974 aaKnown RBP20.32■□□□□ 0.84
CHMP7-203ENST00000517325 CPDO75976 1380 aa20.32■□□□□ 0.84
CHMP7-203ENST00000517325 PKD1L3Q7Z443 1732 aa20.31■□□□□ 0.84
CHMP7-203ENST00000517325 XAGE3Q8WTP9 111 aa20.31■□□□□ 0.84
CHMP7-203ENST00000517325 GRPEL1Q9HAV7 217 aa20.31■□□□□ 0.84
CHMP7-203ENST00000517325 CWC22Q9HCG8 908 aaKnown RBP20.31■□□□□ 0.84
CHMP7-203ENST00000517325 HDAC5Q9UQL6 1122 aa20.31■□□□□ 0.84
CHMP7-203ENST00000517325 NUCB2P80303 420 aa20.31■□□□□ 0.84
CHMP7-203ENST00000517325 CNTROBQ8N137 903 aa20.31■□□□□ 0.84
CHMP7-203ENST00000517325 CLASRPQ8N2M8 674 aaKnown RBP20.31■□□□□ 0.84
CHMP7-203ENST00000517325 TTC41PQ6P2S7 1318 aa20.3■□□□□ 0.84
CHMP7-203ENST00000517325 MRE11P49959 708 aa20.3■□□□□ 0.84
CHMP7-203ENST00000517325 GLIPR1L2Q4G1C9 344 aa20.3■□□□□ 0.84
CHMP7-203ENST00000517325 COPS6Q7L5N1 327 aa20.3■□□□□ 0.84
CHMP7-203ENST00000517325 IL17RAQ96F46 866 aa20.3■□□□□ 0.84
CHMP7-203ENST00000517325 TMX3Q96JJ7 454 aa20.3■□□□□ 0.84
CHMP7-203ENST00000517325 USP16Q9Y5T5 823 aa20.3■□□□□ 0.84
CHMP7-203ENST00000517325 XIRP1Q702N8 1843 aaKnown RBP20.3■□□□□ 0.84
CHMP7-203ENST00000517325 LARP1Q6PKG0 1096 aaKnown RBP20.3■□□□□ 0.84
CHMP7-203ENST00000517325 BRINP3Q76B58 766 aa20.3■□□□□ 0.84
CHMP7-203ENST00000517325 PLEKHG2Q9H7P9 1386 aa20.29■□□□□ 0.84
CHMP7-203ENST00000517325 SGSM2O43147 1006 aa20.29■□□□□ 0.84
CHMP7-203ENST00000517325 PIP4K2AP48426 406 aaPredicted RBP20.29■□□□□ 0.84
CHMP7-203ENST00000517325 LRP10Q7Z4F1 713 aa20.29■□□□□ 0.84
CHMP7-203ENST00000517325 NEURL1BA8MQ27 555 aa20.29■□□□□ 0.84
CHMP7-203ENST00000517325 GLRX3O76003 335 aaKnown RBP20.29■□□□□ 0.84
CHMP7-203ENST00000517325 TTC5Q8N0Z6 440 aa20.29■□□□□ 0.84
CHMP7-203ENST00000517325 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.29■□□□□ 0.84
CHMP7-203ENST00000517325 SNRPA1P09661 255 aaKnown RBP20.28■□□□□ 0.84
CHMP7-203ENST00000517325 EPB41L2O43491 1005 aaKnown RBP20.28■□□□□ 0.84
CHMP7-203ENST00000517325 PTMSP20962 102 aa20.28■□□□□ 0.84
CHMP7-203ENST00000517325 HSPA4P34932 840 aa20.28■□□□□ 0.84
CHMP7-203ENST00000517325 ERC1Q8IUD2 1116 aa20.28■□□□□ 0.84
CHMP7-203ENST00000517325 ESPNB1AK53 854 aa20.27■□□□□ 0.84
CHMP7-203ENST00000517325 SKOR2Q2VWA4 1001 aaPredicted RBP20.27■□□□□ 0.84
CHMP7-203ENST00000517325 GAS2L3Q86XJ1 694 aa20.27■□□□□ 0.84
CHMP7-203ENST00000517325 UPF3BQ9BZI7 483 aaKnown RBP20.27■□□□□ 0.84
CHMP7-203ENST00000517325 RAD50Q92878 1312 aa20.27■□□□□ 0.84
CHMP7-203ENST00000517325 SASH1O94885 1247 aa20.27■□□□□ 0.84
CHMP7-203ENST00000517325 MCM2P49736 904 aa20.27■□□□□ 0.84
CHMP7-203ENST00000517325 NEXNQ0ZGT2 675 aa20.27■□□□□ 0.84
CHMP7-203ENST00000517325 MYD88Q99836 296 aa20.27■□□□□ 0.84
CHMP7-203ENST00000517325 METTL22Q9BUU2 404 aaPredicted RBP20.27■□□□□ 0.84
CHMP7-203ENST00000517325 ECHDC1Q9NTX5 307 aa20.27■□□□□ 0.84
CHMP7-203ENST00000517325 GCKRQ14397 625 aa20.26■□□□□ 0.83
CHMP7-203ENST00000517325 FMNL2Q96PY5 1086 aa20.26■□□□□ 0.83
CHMP7-203ENST00000517325 ZDHHC9Q9Y397 364 aa20.26■□□□□ 0.83
CHMP7-203ENST00000517325 GOLGA6L22H0YM25 854 aa20.26■□□□□ 0.83
CHMP7-203ENST00000517325 IFIT2P09913 472 aaKnown RBP20.26■□□□□ 0.83
CHMP7-203ENST00000517325 CWC27Q6UX04 472 aaKnown RBP20.26■□□□□ 0.83
CHMP7-203ENST00000517325 AACSQ86V21 672 aa20.26■□□□□ 0.83
CHMP7-203ENST00000517325 LSG1Q9H089 658 aaKnown RBP20.26■□□□□ 0.83
CHMP7-203ENST00000517325 CABP4P57796 275 aa20.25■□□□□ 0.83
CHMP7-203ENST00000517325 NOL8Q76FK4 1167 aaKnown RBP20.25■□□□□ 0.83
CHMP7-203ENST00000517325 GLI3P10071 1580 aa20.25■□□□□ 0.83
CHMP7-203ENST00000517325 ANKRD13DQ6ZTN6 518 aa20.25■□□□□ 0.83
CHMP7-203ENST00000517325 CUL4AQ13619 759 aa20.24■□□□□ 0.83
CHMP7-203ENST00000517325 EPHA10Q5JZY3 1008 aa20.24■□□□□ 0.83
CHMP7-203ENST00000517325 MCTP1Q6DN14 999 aa20.24■□□□□ 0.83
CHMP7-203ENST00000517325 DNAJC5Q9H3Z4 198 aa20.24■□□□□ 0.83
CHMP7-203ENST00000517325 RRP9O43818 475 aaKnown RBP20.23■□□□□ 0.83
CHMP7-203ENST00000517325 G3BP1Q13283 466 aaKnown RBP eCLIP20.23■□□□□ 0.83
CHMP7-203ENST00000517325 KLHDC4Q8TBB5 520 aa20.23■□□□□ 0.83
CHMP7-203ENST00000517325 EAF2Q96CJ1 260 aaPredicted RBP20.23■□□□□ 0.83
CHMP7-203ENST00000517325 GPATCH3Q96I76 525 aa20.23■□□□□ 0.83
CHMP7-203ENST00000517325 SIL1Q9H173 461 aa20.23■□□□□ 0.83
CHMP7-203ENST00000517325 PRDM11Q9NQV5 511 aa20.23■□□□□ 0.83
CHMP7-203ENST00000517325 PARP4Q9UKK3 1724 aaKnown RBP20.22■□□□□ 0.83
CHMP7-203ENST00000517325 JARID2Q92833 1246 aaPredicted RBP20.22■□□□□ 0.83
CHMP7-203ENST00000517325 WDR17Q8IZU2 1322 aa20.22■□□□□ 0.83
CHMP7-203ENST00000517325 DIAPH3Q9NSV4 1193 aa20.22■□□□□ 0.83
CHMP7-203ENST00000517325 TLR7Q9NYK1 1049 aaKnown RBP20.22■□□□□ 0.83
CHMP7-203ENST00000517325 SNX14Q9Y5W7 946 aa20.22■□□□□ 0.83
CHMP7-203ENST00000517325 CCDC8Q9H0W5 538 aaPredicted RBP20.21■□□□□ 0.83
CHMP7-203ENST00000517325 RASEFQ8IZ41 740 aa20.21■□□□□ 0.83
CHMP7-203ENST00000517325 KLHL40Q2TBA0 621 aa20.2■□□□□ 0.82
CHMP7-203ENST00000517325 KIAA1211Q6ZU35 1233 aa20.2■□□□□ 0.82
CHMP7-203ENST00000517325 TOM1L2Q6ZVM7 507 aa20.2■□□□□ 0.82
CHMP7-203ENST00000517325 DDX49Q9Y6V7 483 aaKnown RBP20.2■□□□□ 0.82
CHMP7-203ENST00000517325 SOS2Q07890 1332 aaPredicted RBP20.2■□□□□ 0.82
CHMP7-203ENST00000517325 EVI5LQ96CN4 794 aa20.19■□□□□ 0.82
CHMP7-203ENST00000517325 TRIM44Q96DX7 344 aaPredicted RBP20.19■□□□□ 0.82
CHMP7-203ENST00000517325 CHAMP1Q96JM3 812 aa20.19■□□□□ 0.82
CHMP7-203ENST00000517325 LMBRD1Q9NUN5 540 aa20.19■□□□□ 0.82
CHMP7-203ENST00000517325 ARFGEF2Q9Y6D5 1785 aa20.19■□□□□ 0.82
CHMP7-203ENST00000517325 COL5A2P05997 1499 aaPredicted RBP20.19■□□□□ 0.82
CHMP7-203ENST00000517325 PCDH11XQ9BZA7 1347 aa20.19■□□□□ 0.82
CHMP7-203ENST00000517325 PCDH11YQ9BZA8 1340 aa20.19■□□□□ 0.82
CHMP7-203ENST00000517325 ZCRB1Q8TBF4 217 aaKnown RBP20.19■□□□□ 0.82
CHMP7-203ENST00000517325 INTS4Q96HW7 963 aaKnown RBP20.19■□□□□ 0.82
CHMP7-203ENST00000517325 LAMB4A4D0S4 1761 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms