RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 GDF9O60383 454 aa5.33□□□□□ -1.56
RNU6-840P-201ENST00000517275 SORBS3O60504 671 aa5.33□□□□□ -1.56
RNU6-840P-201ENST00000517275 ZIC2O95409 532 aaPredicted RBP5.33□□□□□ -1.56
RNU6-840P-201ENST00000517275 GNA15P30679 374 aa5.33□□□□□ -1.56
RNU6-840P-201ENST00000517275 PRR20EP86478 221 aa5.33□□□□□ -1.56
RNU6-840P-201ENST00000517275 PRR20CP86479 221 aa5.33□□□□□ -1.56
RNU6-840P-201ENST00000517275 PRR20DP86480 221 aa5.33□□□□□ -1.56
RNU6-840P-201ENST00000517275 PRR20BP86481 221 aa5.33□□□□□ -1.56
RNU6-840P-201ENST00000517275 PRR20AP86496 221 aa5.33□□□□□ -1.56
RNU6-840P-201ENST00000517275 RAD51AP2Q09MP3 1159 aa5.33□□□□□ -1.56
RNU6-840P-201ENST00000517275 TSNAXIP1Q2TAA8 658 aa5.33□□□□□ -1.56
RNU6-840P-201ENST00000517275 WDR44Q5JSH3 913 aa5.33□□□□□ -1.56
RNU6-840P-201ENST00000517275 IFT43Q96FT9 208 aa5.33□□□□□ -1.56
RNU6-840P-201ENST00000517275 NLRP3Q96P20 1036 aa5.33□□□□□ -1.56
RNU6-840P-201ENST00000517275 DUSP9Q99956 384 aaKnown RBP5.33□□□□□ -1.56
RNU6-840P-201ENST00000517275 TOR4AQ9NXH8 423 aa5.33□□□□□ -1.56
RNU6-840P-201ENST00000517275 CABP1Q9NZU7 370 aa5.33□□□□□ -1.56
RNU6-840P-201ENST00000517275 SPINT1O43278 529 aa5.32□□□□□ -1.56
RNU6-840P-201ENST00000517275 NEFLP07196 543 aa5.32□□□□□ -1.56
RNU6-840P-201ENST00000517275 PCSK2P16519 638 aa5.32□□□□□ -1.56
RNU6-840P-201ENST00000517275 MAPK8P45983 427 aa5.32□□□□□ -1.56
RNU6-840P-201ENST00000517275 WDR4P57081 412 aaKnown RBP5.32□□□□□ -1.56
RNU6-840P-201ENST00000517275 HDLBPQ00341 1268 aaKnown RBP5.32□□□□□ -1.56
RNU6-840P-201ENST00000517275 XPCQ01831 940 aaPredicted RBP5.32□□□□□ -1.56
RNU6-840P-201ENST00000517275 SF3A1Q15459 793 aaKnown RBP5.32□□□□□ -1.56
RNU6-840P-201ENST00000517275 NBPF10Q6P3W6 841 aaKnown RBP5.32□□□□□ -1.56
RNU6-840P-201ENST00000517275 XKR5Q6UX68 686 aa5.32□□□□□ -1.56
RNU6-840P-201ENST00000517275 METTL16Q86W50 562 aaKnown RBP5.32□□□□□ -1.56
RNU6-840P-201ENST00000517275 ATCAYQ86WG3 371 aa5.32□□□□□ -1.56
RNU6-840P-201ENST00000517275 TREML1Q86YW5 311 aa5.32□□□□□ -1.56
RNU6-840P-201ENST00000517275 EDEM1Q92611 657 aa5.32□□□□□ -1.56
RNU6-840P-201ENST00000517275 CRELD1Q96HD1 420 aa5.32□□□□□ -1.56
RNU6-840P-201ENST00000517275 ZFAND3Q9H8U3 227 aa5.32□□□□□ -1.56
RNU6-840P-201ENST00000517275 C11orf16Q9NQ32 467 aa5.32□□□□□ -1.56
RNU6-840P-201ENST00000517275 DMGDHQ9UI17 866 aaKnown RBP5.32□□□□□ -1.56
RNU6-840P-201ENST00000517275 ZNF232Q9UNY5 417 aa5.32□□□□□ -1.56
RNU6-840P-201ENST00000517275 BCS1LQ9Y276 419 aa5.32□□□□□ -1.56
RNU6-840P-201ENST00000517275 PNMA6FA0A0J9YX94 578 aa5.31□□□□□ -1.56
RNU6-840P-201ENST00000517275 POTECB2RU33 542 aa5.31□□□□□ -1.56
RNU6-840P-201ENST00000517275 GTF2E1P29083 439 aaPredicted RBP5.31□□□□□ -1.56
RNU6-840P-201ENST00000517275 FANCCQ00597 558 aa5.31□□□□□ -1.56
RNU6-840P-201ENST00000517275 NBPF1Q3BBV0 1214 aa5.31□□□□□ -1.56
RNU6-840P-201ENST00000517275 GNASQ5JWF2 1037 aa5.31□□□□□ -1.56
RNU6-840P-201ENST00000517275 TMC1Q8TDI8 760 aa5.31□□□□□ -1.56
RNU6-840P-201ENST00000517275 NGLY1Q96IV0 654 aa5.31□□□□□ -1.56
RNU6-840P-201ENST00000517275 CSRNP1Q96S65 589 aa5.31□□□□□ -1.56
RNU6-840P-201ENST00000517275 TSEN34Q9BSV6 310 aaKnown RBP5.31□□□□□ -1.56
RNU6-840P-201ENST00000517275 KLK14Q9P0G3 267 aa5.31□□□□□ -1.56
RNU6-840P-201ENST00000517275 MEN1O00255 615 aa5.3□□□□□ -1.56
RNU6-840P-201ENST00000517275 SMPD1P17405 629 aa5.3□□□□□ -1.56
RNU6-840P-201ENST00000517275 ATP4AP20648 1035 aa5.3□□□□□ -1.56
RNU6-840P-201ENST00000517275 TXLNAP40222 546 aa5.3□□□□□ -1.56
RNU6-840P-201ENST00000517275 DNM1Q05193 864 aaKnown RBP5.3□□□□□ -1.56
RNU6-840P-201ENST00000517275 AAMPQ13685 434 aa5.3□□□□□ -1.56
RNU6-840P-201ENST00000517275 C4orf17Q53FE4 359 aa5.3□□□□□ -1.56
RNU6-840P-201ENST00000517275 NAALADL2Q58DX5 795 aa5.3□□□□□ -1.56
RNU6-840P-201ENST00000517275 TMEM214Q6NUQ4 689 aaKnown RBP5.3□□□□□ -1.56
RNU6-840P-201ENST00000517275 DRC1Q96MC2 740 aa5.3□□□□□ -1.56
RNU6-840P-201ENST00000517275 TGIF2Q9GZN2 237 aa5.3□□□□□ -1.56
RNU6-840P-201ENST00000517275 NIF3L1Q9GZT8 377 aa5.3□□□□□ -1.56
RNU6-840P-201ENST00000517275 MRS2Q9HD23 443 aa5.3□□□□□ -1.56
RNU6-840P-201ENST00000517275 HCN4Q9Y3Q4 1203 aa5.3□□□□□ -1.56
RNU6-840P-201ENST00000517275 J3QL48 77 aa5.29□□□□□ -1.56
RNU6-840P-201ENST00000517275 EIF1AYO14602 144 aaKnown RBP5.29□□□□□ -1.56
RNU6-840P-201ENST00000517275 GIPC1O14908 333 aa5.29□□□□□ -1.56
RNU6-840P-201ENST00000517275 ERCC5P28715 1186 aaPredicted RBP5.29□□□□□ -1.56
RNU6-840P-201ENST00000517275 PLA2G4AP47712 749 aa5.29□□□□□ -1.56
RNU6-840P-201ENST00000517275 RELBQ01201 579 aa5.29□□□□□ -1.56
RNU6-840P-201ENST00000517275 PSMD2Q13200 908 aa5.29□□□□□ -1.56
RNU6-840P-201ENST00000517275 PDE12Q6L8Q7 609 aaKnown RBP5.29□□□□□ -1.56
RNU6-840P-201ENST00000517275 RHPN1Q8TCX5 695 aa5.29□□□□□ -1.56
RNU6-840P-201ENST00000517275 SNX29Q8TEQ0 813 aa5.29□□□□□ -1.56
RNU6-840P-201ENST00000517275 PIK3R5Q8WYR1 880 aa5.29□□□□□ -1.56
RNU6-840P-201ENST00000517275 UBXN4Q92575 508 aa5.29□□□□□ -1.56
RNU6-840P-201ENST00000517275 NUDT16Q96DE0 195 aaKnown RBP5.29□□□□□ -1.56
RNU6-840P-201ENST00000517275 AGBL1Q96MI9 1066 aa5.29□□□□□ -1.56
RNU6-840P-201ENST00000517275 USP35Q9P2H5 1018 aa5.29□□□□□ -1.56
RNU6-840P-201ENST00000517275 WWC3Q9ULE0 1092 aa5.29□□□□□ -1.56
RNU6-840P-201ENST00000517275 SHROOM4Q9ULL8 1493 aa5.28□□□□□ -1.56
RNU6-840P-201ENST00000517275 CPNE3O75131 537 aaKnown RBP5.28□□□□□ -1.56
RNU6-840P-201ENST00000517275 MICAL2O94851 1124 aa5.28□□□□□ -1.56
RNU6-840P-201ENST00000517275 INPP5BP32019 993 aa5.28□□□□□ -1.56
RNU6-840P-201ENST00000517275 ARSDP51689 593 aa5.28□□□□□ -1.56
RNU6-840P-201ENST00000517275 PTPN12Q05209 780 aaKnown RBP5.28□□□□□ -1.56
RNU6-840P-201ENST00000517275 CYP4X1Q8N118 509 aa5.28□□□□□ -1.56
RNU6-840P-201ENST00000517275 LINC00528Q8N1L1 170 aa5.28□□□□□ -1.56
RNU6-840P-201ENST00000517275 SLC43A3Q8NBI5 491 aa5.28□□□□□ -1.56
RNU6-840P-201ENST00000517275 SUSD3Q96L08 255 aa5.28□□□□□ -1.56
RNU6-840P-201ENST00000517275 TINF2Q9BSI4 451 aa5.28□□□□□ -1.56
RNU6-840P-201ENST00000517275 SRCIN1Q9C0H9 1055 aa5.28□□□□□ -1.56
RNU6-840P-201ENST00000517275 ANKIB1Q9P2G1 1089 aa5.28□□□□□ -1.56
RNU6-840P-201ENST00000517275 VTI1BQ9UEU0 232 aa5.28□□□□□ -1.56
RNU6-840P-201ENST00000517275 SPG7Q9UQ90 795 aa5.28□□□□□ -1.56
RNU6-840P-201ENST00000517275 PARP3Q9Y6F1 533 aa5.28□□□□□ -1.56
RNU6-840P-201ENST00000517275 AK5Q9Y6K8 562 aa5.28□□□□□ -1.56
RNU6-840P-201ENST00000517275 OPLAHO14841 1288 aa5.27□□□□□ -1.57
RNU6-840P-201ENST00000517275 EGFRP00533 1210 aa5.27□□□□□ -1.57
RNU6-840P-201ENST00000517275 TATP17735 454 aaPredicted RBP5.27□□□□□ -1.57
RNU6-840P-201ENST00000517275 ZNF76P36508 570 aa5.27□□□□□ -1.57
RNU6-840P-201ENST00000517275 ORC1Q13415 861 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms