RNA–Protein interactions for RNA: ENST00000517097.1

SCARNA3-201, small Cajal body-specific RNA 3, humanhuman

BASIC

Gene SCARNA3, Length 143 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA3-201ENST00000517097 SCNN1DP51172 638 aa3.66□□□□□ -1.82
SCARNA3-201ENST00000517097 GDF10P55107 478 aa3.66□□□□□ -1.82
SCARNA3-201ENST00000517097 RAB15P59190 212 aa3.66□□□□□ -1.82
SCARNA3-201ENST00000517097 IGBP1P78318 339 aa3.66□□□□□ -1.82
SCARNA3-201ENST00000517097 PTPN12Q05209 780 aaKnown RBP3.66□□□□□ -1.82
SCARNA3-201ENST00000517097 FOXC1Q12948 553 aa3.66□□□□□ -1.82
SCARNA3-201ENST00000517097 PTPROQ16827 1216 aa3.66□□□□□ -1.82
SCARNA3-201ENST00000517097 FAM26DQ5JW98 314 aa3.66□□□□□ -1.82
SCARNA3-201ENST00000517097 ZNF746Q6NUN9 644 aaPredicted RBP3.66□□□□□ -1.82
SCARNA3-201ENST00000517097 USP48Q86UV5 1035 aa3.66□□□□□ -1.82
SCARNA3-201ENST00000517097 JAZF1Q86VZ6 243 aa3.66□□□□□ -1.82
SCARNA3-201ENST00000517097 ATCAYQ86WG3 371 aa3.66□□□□□ -1.82
SCARNA3-201ENST00000517097 VPS37DQ86XT2 251 aa3.66□□□□□ -1.82
SCARNA3-201ENST00000517097 MCF2L2Q86YR7 1114 aa3.66□□□□□ -1.82
SCARNA3-201ENST00000517097 ABTB2Q8N961 1025 aa3.66□□□□□ -1.82
SCARNA3-201ENST00000517097 FBF1Q8TES7 1133 aa3.66□□□□□ -1.82
SCARNA3-201ENST00000517097 CFHR5Q9BXR6 569 aa3.66□□□□□ -1.82
SCARNA3-201ENST00000517097 SERTAD1Q9UHV2 236 aa3.66□□□□□ -1.82
SCARNA3-201ENST00000517097 CDV3Q9UKY7 258 aaKnown RBP3.66□□□□□ -1.82
SCARNA3-201ENST00000517097 POLIQ9UNA4 740 aa3.66□□□□□ -1.82
SCARNA3-201ENST00000517097 hCG_2014768A0A024R1R8 64 aa3.65□□□□□ -1.83
SCARNA3-201ENST00000517097 FGRP09769 529 aa3.65□□□□□ -1.83
SCARNA3-201ENST00000517097 RPIAP49247 311 aa3.65□□□□□ -1.83
SCARNA3-201ENST00000517097 BMS1Q14692 1282 aaKnown RBP3.65□□□□□ -1.83
SCARNA3-201ENST00000517097 TBCELQ5QJ74 424 aa3.65□□□□□ -1.83
SCARNA3-201ENST00000517097 CERS3Q8IU89 383 aa3.65□□□□□ -1.83
SCARNA3-201ENST00000517097 TRMT44Q8IYL2 757 aaKnown RBP3.65□□□□□ -1.83
SCARNA3-201ENST00000517097 GJD3Q8N144 294 aa3.65□□□□□ -1.83
SCARNA3-201ENST00000517097 STAG2Q8N3U4 1231 aa3.65□□□□□ -1.83
SCARNA3-201ENST00000517097 ZNF511Q8NB15 262 aa3.65□□□□□ -1.83
SCARNA3-201ENST00000517097 EDEM1Q92611 657 aa3.65□□□□□ -1.83
SCARNA3-201ENST00000517097 KCNB2Q92953 911 aa3.65□□□□□ -1.83
SCARNA3-201ENST00000517097 MYO19Q96H55 970 aa3.65□□□□□ -1.83
SCARNA3-201ENST00000517097 CRELD1Q96HD1 420 aa3.65□□□□□ -1.83
SCARNA3-201ENST00000517097 FRMD6Q96NE9 622 aa3.65□□□□□ -1.83
SCARNA3-201ENST00000517097 CSRNP1Q96S65 589 aa3.65□□□□□ -1.83
SCARNA3-201ENST00000517097 C2orf49Q9BVC5 232 aaPredicted RBP3.65□□□□□ -1.83
SCARNA3-201ENST00000517097 OSBPL3Q9H4L5 887 aa3.65□□□□□ -1.83
SCARNA3-201ENST00000517097 QTRT2Q9H974 415 aaKnown RBP3.65□□□□□ -1.83
SCARNA3-201ENST00000517097 SRA1Q9HD15 236 aaKnown RBP3.65□□□□□ -1.83
SCARNA3-201ENST00000517097 AAASQ9NRG9 546 aa3.65□□□□□ -1.83
SCARNA3-201ENST00000517097 DMGDHQ9UI17 866 aaKnown RBP3.65□□□□□ -1.83
SCARNA3-201ENST00000517097 LRFN2Q9ULH4 789 aa3.65□□□□□ -1.83
SCARNA3-201ENST00000517097 ERVH48-1M5A8F1 160 aa3.64□□□□□ -1.83
SCARNA3-201ENST00000517097 CLSTN1O94985 981 aa3.64□□□□□ -1.83
SCARNA3-201ENST00000517097 INHAP05111 366 aa3.64□□□□□ -1.83
SCARNA3-201ENST00000517097 ATF4P18848 351 aaPredicted RBP3.64□□□□□ -1.83
SCARNA3-201ENST00000517097 BRD2P25440 801 aaKnown RBP3.64□□□□□ -1.83
SCARNA3-201ENST00000517097 HSD3B2P26439 372 aa3.64□□□□□ -1.83
SCARNA3-201ENST00000517097 MZF1P28698 734 aaPredicted RBP3.64□□□□□ -1.83
SCARNA3-201ENST00000517097 USP5P45974 858 aa3.64□□□□□ -1.83
SCARNA3-201ENST00000517097 GJA8P48165 433 aa3.64□□□□□ -1.83
SCARNA3-201ENST00000517097 ERVK-9P63128 1117 aa3.64□□□□□ -1.83
SCARNA3-201ENST00000517097 NFE2L2Q16236 605 aa3.64□□□□□ -1.83
SCARNA3-201ENST00000517097 INTS6LQ5JSJ4 861 aaKnown RBP3.64□□□□□ -1.83
SCARNA3-201ENST00000517097 CC2D2BQ6DHV5 1058 aa3.64□□□□□ -1.83
SCARNA3-201ENST00000517097 HS2ST1Q7LGA3 356 aa3.64□□□□□ -1.83
SCARNA3-201ENST00000517097 SLC9A9Q8IVB4 645 aa3.64□□□□□ -1.83
SCARNA3-201ENST00000517097 SLC4A9Q96Q91 983 aa3.64□□□□□ -1.83
SCARNA3-201ENST00000517097 KCTD15Q96SI1 283 aaPredicted RBP3.64□□□□□ -1.83
SCARNA3-201ENST00000517097 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.64□□□□□ -1.83
SCARNA3-201ENST00000517097 ESF1Q9H501 851 aaKnown RBP3.64□□□□□ -1.83
SCARNA3-201ENST00000517097 METTL14Q9HCE5 456 aaKnown RBP3.64□□□□□ -1.83
SCARNA3-201ENST00000517097 TOR4AQ9NXH8 423 aa3.64□□□□□ -1.83
SCARNA3-201ENST00000517097 USP31Q70CQ4 1352 aa3.63□□□□□ -1.83
SCARNA3-201ENST00000517097 EIF1AYO14602 144 aaKnown RBP3.63□□□□□ -1.83
SCARNA3-201ENST00000517097 PDGFAP04085 211 aa3.63□□□□□ -1.83
SCARNA3-201ENST00000517097 IBSPP21815 317 aaPredicted RBP3.63□□□□□ -1.83
SCARNA3-201ENST00000517097 EIF4BP23588 611 aaKnown RBP3.63□□□□□ -1.83
SCARNA3-201ENST00000517097 PSMA6P60900 246 aaKnown RBP3.63□□□□□ -1.83
SCARNA3-201ENST00000517097 FOXK2Q01167 660 aa3.63□□□□□ -1.83
SCARNA3-201ENST00000517097 DNM1Q05193 864 aaKnown RBP3.63□□□□□ -1.83
SCARNA3-201ENST00000517097 ORC1Q13415 861 aa3.63□□□□□ -1.83
SCARNA3-201ENST00000517097 MRFAP1L1Q96HT8 127 aa3.63□□□□□ -1.83
SCARNA3-201ENST00000517097 BRINP2Q9C0B6 783 aa3.63□□□□□ -1.83
SCARNA3-201ENST00000517097 ETNK1Q9HBU6 452 aa3.63□□□□□ -1.83
SCARNA3-201ENST00000517097 SCHIP1Q9P0W5 487 aaPredicted RBP3.63□□□□□ -1.83
SCARNA3-201ENST00000517097 DACH1Q9UI36 760 aa3.63□□□□□ -1.83
SCARNA3-201ENST00000517097 GGT7Q9UJ14 662 aa3.63□□□□□ -1.83
SCARNA3-201ENST00000517097 SPG7Q9UQ90 795 aa3.63□□□□□ -1.83
SCARNA3-201ENST00000517097 MRPL42Q9Y6G3 142 aaKnown RBP3.63□□□□□ -1.83
SCARNA3-201ENST00000517097 A6NJY4 79 aa3.62□□□□□ -1.83
SCARNA3-201ENST00000517097 OPLAHO14841 1288 aa3.62□□□□□ -1.83
SCARNA3-201ENST00000517097 CD2BP2O95400 341 aaKnown RBP3.62□□□□□ -1.83
SCARNA3-201ENST00000517097 PAK2Q13177 524 aa3.62□□□□□ -1.83
SCARNA3-201ENST00000517097 MTFR1Q15390 333 aa3.62□□□□□ -1.83
SCARNA3-201ENST00000517097 RNF187Q5TA31 235 aaPredicted RBP3.62□□□□□ -1.83
SCARNA3-201ENST00000517097 ETFBKMTQ8IXQ9 262 aa3.62□□□□□ -1.83
SCARNA3-201ENST00000517097 CKAP2LQ8IYA6 745 aa3.62□□□□□ -1.83
SCARNA3-201ENST00000517097 CRIPAKQ8N1N5 446 aa3.62□□□□□ -1.83
SCARNA3-201ENST00000517097 DNAJC25Q9H1X3 360 aa3.62□□□□□ -1.83
SCARNA3-201ENST00000517097 NEUROD4Q9HD90 331 aa3.62□□□□□ -1.83
SCARNA3-201ENST00000517097 KLHL42Q9P2K6 505 aa3.62□□□□□ -1.83
SCARNA3-201ENST00000517097 NOP58Q9Y2X3 529 aaKnown RBP3.62□□□□□ -1.83
SCARNA3-201ENST00000517097 PPME1Q9Y570 386 aa3.62□□□□□ -1.83
SCARNA3-201ENST00000517097 K7ELQ4 463 aaPredicted RBP3.61□□□□□ -1.83
SCARNA3-201ENST00000517097 AVPP01185 164 aa3.61□□□□□ -1.83
SCARNA3-201ENST00000517097 NEFLP07196 543 aa3.61□□□□□ -1.83
SCARNA3-201ENST00000517097 XRCC5P13010 732 aaKnown RBP3.61□□□□□ -1.83
SCARNA3-201ENST00000517097 ZAP70P43403 619 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms