RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 NOM1Q5C9Z4 860 aaKnown RBP5.31□□□□□ -1.56
SCARNA13-201ENST00000516672 SEMA6BQ9H3T3 888 aa5.31□□□□□ -1.56
SCARNA13-201ENST00000516672 THEGQ9P2T0 379 aa5.31□□□□□ -1.56
SCARNA13-201ENST00000516672 KAT6BQ8WYB5 2073 aa5.31□□□□□ -1.56
SCARNA13-201ENST00000516672 IFT172Q9UG01 1749 aa5.31□□□□□ -1.56
SCARNA13-201ENST00000516672 NSD2O96028 1365 aa5.3□□□□□ -1.56
SCARNA13-201ENST00000516672 SOBPA7XYQ1 873 aa5.3□□□□□ -1.56
SCARNA13-201ENST00000516672 PRIM1P49642 420 aaKnown RBP5.3□□□□□ -1.56
SCARNA13-201ENST00000516672 ZNF157P51786 506 aaPredicted RBP5.3□□□□□ -1.56
SCARNA13-201ENST00000516672 ZNF326Q5BKZ1 582 aaKnown RBP5.3□□□□□ -1.56
SCARNA13-201ENST00000516672 SHISA4Q96DD7 197 aa5.3□□□□□ -1.56
SCARNA13-201ENST00000516672 UIMC1Q96RL1 719 aa5.3□□□□□ -1.56
SCARNA13-201ENST00000516672 CABP2Q9NPB3 220 aa5.3□□□□□ -1.56
SCARNA13-201ENST00000516672 ZNF462Q96JM2 2506 aa5.3□□□□□ -1.56
SCARNA13-201ENST00000516672 PPIP5K1Q6PFW1 1433 aa5.3□□□□□ -1.56
SCARNA13-201ENST00000516672 SMG6Q86US8 1419 aaKnown RBP5.3□□□□□ -1.56
SCARNA13-201ENST00000516672 NAV2Q8IVL1 2488 aa5.3□□□□□ -1.56
SCARNA13-201ENST00000516672 REM2Q8IYK8 340 aaPredicted RBP5.29□□□□□ -1.56
SCARNA13-201ENST00000516672 NLGN1Q8N2Q7 840 aa5.29□□□□□ -1.56
SCARNA13-201ENST00000516672 KHSRPQ92945 711 aaKnown RBP eCLIP5.29□□□□□ -1.56
SCARNA13-201ENST00000516672 CARD10Q9BWT7 1032 aa5.29□□□□□ -1.56
SCARNA13-201ENST00000516672 GLIS2Q9BZE0 524 aaPredicted RBP5.29□□□□□ -1.56
SCARNA13-201ENST00000516672 TAF1LQ8IZX4 1826 aa5.29□□□□□ -1.56
SCARNA13-201ENST00000516672 USP47Q96K76 1375 aa5.29□□□□□ -1.56
SCARNA13-201ENST00000516672 SLC10A3P09131 477 aa5.28□□□□□ -1.56
SCARNA13-201ENST00000516672 TMF1P82094 1093 aa5.28□□□□□ -1.56
SCARNA13-201ENST00000516672 EVX2Q03828 476 aa5.28□□□□□ -1.56
SCARNA13-201ENST00000516672 UBE2Q1Q7Z7E8 422 aa5.28□□□□□ -1.56
SCARNA13-201ENST00000516672 TTLL6Q8N841 843 aa5.28□□□□□ -1.56
SCARNA13-201ENST00000516672 SLC4A5Q9BY07 1137 aa5.28□□□□□ -1.56
SCARNA13-201ENST00000516672 UBE2OQ9C0C9 1292 aaKnown RBP5.28□□□□□ -1.56
SCARNA13-201ENST00000516672 COL4A5P29400 1685 aa5.28□□□□□ -1.56
SCARNA13-201ENST00000516672 HMGB2P26583 209 aaKnown RBP5.27□□□□□ -1.57
SCARNA13-201ENST00000516672 NBPF11Q86T75 865 aa5.27□□□□□ -1.57
SCARNA13-201ENST00000516672 CSRNP3Q8WYN3 585 aa5.27□□□□□ -1.57
SCARNA13-201ENST00000516672 USP9XQ93008 2570 aaPredicted RBP5.27□□□□□ -1.57
SCARNA13-201ENST00000516672 ANKRD36BQ8N2N9 1353 aa5.27□□□□□ -1.57
SCARNA13-201ENST00000516672 REV3LO60673 3130 aa5.26□□□□□ -1.57
SCARNA13-201ENST00000516672 CEP162Q5TB80 1403 aa5.26□□□□□ -1.57
SCARNA13-201ENST00000516672 MAGEA10P43363 369 aaPredicted RBP5.26□□□□□ -1.57
SCARNA13-201ENST00000516672 PPM1EQ8WY54 764 aa5.26□□□□□ -1.57
SCARNA13-201ENST00000516672 TAOK3Q9H2K8 898 aa5.26□□□□□ -1.57
SCARNA13-201ENST00000516672 R3HDMLQ9H3Y0 253 aa5.26□□□□□ -1.57
SCARNA13-201ENST00000516672 STK26Q9P289 416 aa5.26□□□□□ -1.57
SCARNA13-201ENST00000516672 ZMYND8Q9ULU4 1186 aaPredicted RBP5.26□□□□□ -1.57
SCARNA13-201ENST00000516672 COL2A1P02458 1487 aaPredicted RBP5.26□□□□□ -1.57
SCARNA13-201ENST00000516672 GCN1Q92616 2671 aaKnown RBP5.25□□□□□ -1.57
SCARNA13-201ENST00000516672 NCOR1O75376 2440 aa5.25□□□□□ -1.57
SCARNA13-201ENST00000516672 E9PCH4 1651 aa5.25□□□□□ -1.57
SCARNA13-201ENST00000516672 CSB-PGBD3P0DP91 1061 aa5.25□□□□□ -1.57
SCARNA13-201ENST00000516672 BMP1P13497 986 aa5.25□□□□□ -1.57
SCARNA13-201ENST00000516672 SLC9C1Q4G0N8 1177 aa5.25□□□□□ -1.57
SCARNA13-201ENST00000516672 TTYH1Q9H313 450 aaPredicted RBP5.25□□□□□ -1.57
SCARNA13-201ENST00000516672 MON2Q7Z3U7 1717 aa5.25□□□□□ -1.57
SCARNA13-201ENST00000516672 DOT1LQ8TEK3 1739 aa5.25□□□□□ -1.57
SCARNA13-201ENST00000516672 LTBP3Q9NS15 1303 aa5.24□□□□□ -1.57
SCARNA13-201ENST00000516672 FER1L6Q2WGJ9 1857 aa5.24□□□□□ -1.57
SCARNA13-201ENST00000516672 TCF20Q9UGU0 1960 aaKnown RBP5.24□□□□□ -1.57
SCARNA13-201ENST00000516672 DNAH14Q0VDD8 3507 aa5.24□□□□□ -1.57
SCARNA13-201ENST00000516672 PI4K2BG5E9Z4 385 aa5.24□□□□□ -1.57
SCARNA13-201ENST00000516672 C21orf2O43822 256 aa5.24□□□□□ -1.57
SCARNA13-201ENST00000516672 GCP02774 474 aa5.24□□□□□ -1.57
SCARNA13-201ENST00000516672 LMOD1P29536 600 aaPredicted RBP5.24□□□□□ -1.57
SCARNA13-201ENST00000516672 USP50Q70EL3 339 aaPredicted RBP5.24□□□□□ -1.57
SCARNA13-201ENST00000516672 DGLUCYQ7Z3D6 616 aa5.24□□□□□ -1.57
SCARNA13-201ENST00000516672 NGDNQ8NEJ9 315 aaKnown RBP5.24□□□□□ -1.57
SCARNA13-201ENST00000516672 AXIN2Q9Y2T1 843 aa5.24□□□□□ -1.57
SCARNA13-201ENST00000516672 CCDC7Q96M83 1385 aa5.24□□□□□ -1.57
SCARNA13-201ENST00000516672 ANKARQ7Z5J8 1434 aa5.23□□□□□ -1.57
SCARNA13-201ENST00000516672 FAM208BQ5VWN6 2430 aa5.23□□□□□ -1.57
SCARNA13-201ENST00000516672 GNPATO15228 680 aa5.23□□□□□ -1.57
SCARNA13-201ENST00000516672 EGFRP00533 1210 aa5.23□□□□□ -1.57
SCARNA13-201ENST00000516672 SYN1P17600 705 aa5.23□□□□□ -1.57
SCARNA13-201ENST00000516672 EPS15P42566 896 aa5.23□□□□□ -1.57
SCARNA13-201ENST00000516672 DDX54Q8TDD1 881 aaKnown RBP5.23□□□□□ -1.57
SCARNA13-201ENST00000516672 RRP7BPQ9NSQ0 103 aa5.23□□□□□ -1.57
SCARNA13-201ENST00000516672 PALLDQ8WX93 1383 aa5.23□□□□□ -1.57
SCARNA13-201ENST00000516672 XIRP2A4UGR9 3374 aa5.23□□□□□ -1.57
SCARNA13-201ENST00000516672 LTN1O94822 1766 aa5.22□□□□□ -1.57
SCARNA13-201ENST00000516672 ATRNL1Q5VV63 1379 aa5.22□□□□□ -1.57
SCARNA13-201ENST00000516672 GYS1P13807 737 aa5.22□□□□□ -1.57
SCARNA13-201ENST00000516672 CSPP1Q1MSJ5 1256 aa5.22□□□□□ -1.57
SCARNA13-201ENST00000516672 GPC2Q8N158 579 aa5.22□□□□□ -1.57
SCARNA13-201ENST00000516672 ANKS1AQ92625 1134 aa5.22□□□□□ -1.57
SCARNA13-201ENST00000516672 GBA2Q9HCG7 927 aaPredicted RBP5.22□□□□□ -1.57
SCARNA13-201ENST00000516672 ZNF609O15014 1411 aa5.22□□□□□ -1.57
SCARNA13-201ENST00000516672 PPLO60437 1756 aa5.21□□□□□ -1.57
SCARNA13-201ENST00000516672 DLEC1Q9Y238 1755 aa5.21□□□□□ -1.57
SCARNA13-201ENST00000516672 IL2RBP14784 551 aa5.21□□□□□ -1.58
SCARNA13-201ENST00000516672 RASAL3Q86YV0 1011 aa5.21□□□□□ -1.58
SCARNA13-201ENST00000516672 C7orf61Q8IZ16 206 aa5.21□□□□□ -1.58
SCARNA13-201ENST00000516672 C2orf69Q8N8R5 385 aa5.21□□□□□ -1.58
SCARNA13-201ENST00000516672 PRSS33Q8NF86 280 aa5.21□□□□□ -1.58
SCARNA13-201ENST00000516672 CD99L2Q8TCZ2 262 aa5.21□□□□□ -1.58
SCARNA13-201ENST00000516672 CFHR5Q9BXR6 569 aa5.21□□□□□ -1.58
SCARNA13-201ENST00000516672 EFCC1Q9HA90 598 aa5.21□□□□□ -1.58
SCARNA13-201ENST00000516672 TPRP12270 2363 aaKnown RBP5.21□□□□□ -1.58
SCARNA13-201ENST00000516672 USP24Q9UPU5 2620 aa5.21□□□□□ -1.58
SCARNA13-201ENST00000516672 ACACBO00763 2458 aa5.2□□□□□ -1.58
SCARNA13-201ENST00000516672 ANKRD17O75179 2603 aaKnown RBP5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms