RNA–Protein interactions for RNA: ENST00000516409.1

SCARNA15.2-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 127 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.2-201ENST00000516409 GNA15P30679 374 aa4.97□□□□□ -1.61
SCARNA15.2-201ENST00000516409 TNNI2P48788 182 aa4.97□□□□□ -1.61
SCARNA15.2-201ENST00000516409 HIRAP54198 1017 aaPredicted RBP4.97□□□□□ -1.61
SCARNA15.2-201ENST00000516409 CENPCQ03188 943 aa4.97□□□□□ -1.61
SCARNA15.2-201ENST00000516409 PPP1R18Q6NYC8 613 aa4.97□□□□□ -1.61
SCARNA15.2-201ENST00000516409 LIAT1Q6ZQX7 453 aa4.97□□□□□ -1.61
SCARNA15.2-201ENST00000516409 KDF1Q8NAX2 398 aaPredicted RBP4.97□□□□□ -1.61
SCARNA15.2-201ENST00000516409 GPR152Q8TDT2 470 aa4.97□□□□□ -1.61
SCARNA15.2-201ENST00000516409 CSRNP1Q96S65 589 aa4.97□□□□□ -1.61
SCARNA15.2-201ENST00000516409 DNAJC2Q99543 621 aaKnown RBP4.97□□□□□ -1.61
SCARNA15.2-201ENST00000516409 FHDC1Q9C0D6 1143 aaPredicted RBP4.97□□□□□ -1.61
SCARNA15.2-201ENST00000516409 TGIF2Q9GZN2 237 aa4.97□□□□□ -1.61
SCARNA15.2-201ENST00000516409 EIF1AYO14602 144 aaKnown RBP4.96□□□□□ -1.62
SCARNA15.2-201ENST00000516409 OPLAHO14841 1288 aa4.96□□□□□ -1.62
SCARNA15.2-201ENST00000516409 CTSHP09668 335 aa4.96□□□□□ -1.62
SCARNA15.2-201ENST00000516409 ITGAEP38570 1179 aa4.96□□□□□ -1.62
SCARNA15.2-201ENST00000516409 USP5P45974 858 aa4.96□□□□□ -1.62
SCARNA15.2-201ENST00000516409 CLN3Q13286 438 aa4.96□□□□□ -1.62
SCARNA15.2-201ENST00000516409 C8orf34Q49A92 452 aa4.96□□□□□ -1.62
SCARNA15.2-201ENST00000516409 TREML1Q86YW5 311 aa4.96□□□□□ -1.62
SCARNA15.2-201ENST00000516409 DHX38Q92620 1227 aaKnown RBP4.96□□□□□ -1.62
SCARNA15.2-201ENST00000516409 EMID1Q96A84 441 aaPredicted RBP4.96□□□□□ -1.62
SCARNA15.2-201ENST00000516409 NUDT16Q96DE0 195 aaKnown RBP4.96□□□□□ -1.62
SCARNA15.2-201ENST00000516409 MRGPRX2Q96LB1 330 aa4.96□□□□□ -1.62
SCARNA15.2-201ENST00000516409 SPATA32Q96LK8 384 aa4.96□□□□□ -1.62
SCARNA15.2-201ENST00000516409 AGBL1Q96MI9 1066 aa4.96□□□□□ -1.62
SCARNA15.2-201ENST00000516409 GGNBP2Q9H3C7 697 aa4.96□□□□□ -1.62
SCARNA15.2-201ENST00000516409 ITGBL1O95965 494 aaPredicted RBP4.95□□□□□ -1.62
SCARNA15.2-201ENST00000516409 CDK11BP21127 795 aaKnown RBP4.95□□□□□ -1.62
SCARNA15.2-201ENST00000516409 TXLNAP40222 546 aa4.95□□□□□ -1.62
SCARNA15.2-201ENST00000516409 NNTQ13423 1086 aa4.95□□□□□ -1.62
SCARNA15.2-201ENST00000516409 ZNF394Q53GI3 561 aa4.95□□□□□ -1.62
SCARNA15.2-201ENST00000516409 DPH6Q7L8W6 267 aa4.95□□□□□ -1.62
SCARNA15.2-201ENST00000516409 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.95□□□□□ -1.62
SCARNA15.2-201ENST00000516409 PRKAG2Q9UGJ0 569 aa4.95□□□□□ -1.62
SCARNA15.2-201ENST00000516409 CDK11AQ9UQ88 783 aaPredicted RBP4.95□□□□□ -1.62
SCARNA15.2-201ENST00000516409 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.95□□□□□ -1.62
SCARNA15.2-201ENST00000516409 PCDHGB7Q9Y5F8 929 aa4.95□□□□□ -1.62
SCARNA15.2-201ENST00000516409 WNT7AO00755 349 aa4.94□□□□□ -1.62
SCARNA15.2-201ENST00000516409 ALDH1A1P00352 501 aa4.94□□□□□ -1.62
SCARNA15.2-201ENST00000516409 PCSK2P16519 638 aa4.94□□□□□ -1.62
SCARNA15.2-201ENST00000516409 PTGIRP43119 386 aa4.94□□□□□ -1.62
SCARNA15.2-201ENST00000516409 RELBQ01201 579 aa4.94□□□□□ -1.62
SCARNA15.2-201ENST00000516409 PI16Q6UXB8 463 aa4.94□□□□□ -1.62
SCARNA15.2-201ENST00000516409 PPARGC1BQ86YN6 1023 aaKnown RBP4.94□□□□□ -1.62
SCARNA15.2-201ENST00000516409 FBF1Q8TES7 1133 aa4.94□□□□□ -1.62
SCARNA15.2-201ENST00000516409 KLRG1Q96E93 195 aa4.94□□□□□ -1.62
SCARNA15.2-201ENST00000516409 CRELD1Q96HD1 420 aa4.94□□□□□ -1.62
SCARNA15.2-201ENST00000516409 NLRP3Q96P20 1036 aa4.94□□□□□ -1.62
SCARNA15.2-201ENST00000516409 ZSCAN10Q96SZ4 725 aaPredicted RBP4.94□□□□□ -1.62
SCARNA15.2-201ENST00000516409 NIFKQ9BYG3 293 aaKnown RBP4.94□□□□□ -1.62
SCARNA15.2-201ENST00000516409 ZNF395Q9H8N7 513 aaPredicted RBP4.94□□□□□ -1.62
SCARNA15.2-201ENST00000516409 BCS1LQ9Y276 419 aa4.94□□□□□ -1.62
SCARNA15.2-201ENST00000516409 AK5Q9Y6K8 562 aa4.94□□□□□ -1.62
SCARNA15.2-201ENST00000516409 EIF4BP23588 611 aaKnown RBP4.93□□□□□ -1.62
SCARNA15.2-201ENST00000516409 DNAJA1P31689 397 aaKnown RBP4.93□□□□□ -1.62
SCARNA15.2-201ENST00000516409 GTF2F1P35269 517 aaKnown RBP eCLIP4.93□□□□□ -1.62
SCARNA15.2-201ENST00000516409 IRS1P35568 1242 aa4.93□□□□□ -1.62
SCARNA15.2-201ENST00000516409 PLA2G4AP47712 749 aa4.93□□□□□ -1.62
SCARNA15.2-201ENST00000516409 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.93□□□□□ -1.62
SCARNA15.2-201ENST00000516409 USPL1Q5W0Q7 1092 aa4.93□□□□□ -1.62
SCARNA15.2-201ENST00000516409 TMEM214Q6NUQ4 689 aaKnown RBP4.93□□□□□ -1.62
SCARNA15.2-201ENST00000516409 GIMAP6Q6P9H5 292 aa4.93□□□□□ -1.62
SCARNA15.2-201ENST00000516409 SLC43A3Q8NBI5 491 aa4.93□□□□□ -1.62
SCARNA15.2-201ENST00000516409 ITPKCQ96DU7 683 aa4.93□□□□□ -1.62
SCARNA15.2-201ENST00000516409 ZFAND3Q9H8U3 227 aa4.93□□□□□ -1.62
SCARNA15.2-201ENST00000516409 FOXD3Q9UJU5 478 aaPredicted RBP4.93□□□□□ -1.62
SCARNA15.2-201ENST00000516409 SPG7Q9UQ90 795 aa4.93□□□□□ -1.62
SCARNA15.2-201ENST00000516409 CPNE3O75131 537 aaKnown RBP4.92□□□□□ -1.62
SCARNA15.2-201ENST00000516409 MICAL2O94851 1124 aa4.92□□□□□ -1.62
SCARNA15.2-201ENST00000516409 ZIC2O95409 532 aaPredicted RBP4.92□□□□□ -1.62
SCARNA15.2-201ENST00000516409 ATP2B1P20020 1258 aa4.92□□□□□ -1.62
SCARNA15.2-201ENST00000516409 RACK1P63244 317 aaKnown RBP4.92□□□□□ -1.62
SCARNA15.2-201ENST00000516409 C1orf53Q5VUE5 145 aa4.92□□□□□ -1.62
SCARNA15.2-201ENST00000516409 Q6ZVU0 165 aa4.92□□□□□ -1.62
SCARNA15.2-201ENST00000516409 TTC16Q8NEE8 873 aa4.92□□□□□ -1.62
SCARNA15.2-201ENST00000516409 RHPN1Q8TCX5 695 aa4.92□□□□□ -1.62
SCARNA15.2-201ENST00000516409 RHBDD1Q8TEB9 315 aa4.92□□□□□ -1.62
SCARNA15.2-201ENST00000516409 LNPKQ9C0E8 428 aa4.92□□□□□ -1.62
SCARNA15.2-201ENST00000516409 INPP5FQ9Y2H2 1132 aa4.92□□□□□ -1.62
SCARNA15.2-201ENST00000516409 USP20Q9Y2K6 914 aa4.92□□□□□ -1.62
SCARNA15.2-201ENST00000516409 WASF2Q9Y6W5 498 aa4.92□□□□□ -1.62
SCARNA15.2-201ENST00000516409 GNL2Q13823 731 aaKnown RBP4.91□□□□□ -1.62
SCARNA15.2-201ENST00000516409 USP48Q86UV5 1035 aa4.91□□□□□ -1.62
SCARNA15.2-201ENST00000516409 EPS8L3Q8TE67 593 aaKnown RBP4.91□□□□□ -1.62
SCARNA15.2-201ENST00000516409 HSH2DQ96JZ2 352 aa4.91□□□□□ -1.62
SCARNA15.2-201ENST00000516409 FRMD6Q96NE9 622 aa4.91□□□□□ -1.62
SCARNA15.2-201ENST00000516409 DNAJC25Q9H1X3 360 aa4.91□□□□□ -1.62
SCARNA15.2-201ENST00000516409 C12orf49Q9H741 205 aa4.91□□□□□ -1.62
SCARNA15.2-201ENST00000516409 NLRP2Q9NX02 1062 aa4.91□□□□□ -1.62
SCARNA15.2-201ENST00000516409 DDX41Q9UJV9 622 aaKnown RBP4.91□□□□□ -1.62
SCARNA15.2-201ENST00000516409 TGFBR3LH3BV60 316 aa4.9□□□□□ -1.63
SCARNA15.2-201ENST00000516409 NEFLP07196 543 aa4.9□□□□□ -1.63
SCARNA15.2-201ENST00000516409 GTF2E1P29083 439 aaPredicted RBP4.9□□□□□ -1.63
SCARNA15.2-201ENST00000516409 SLC19A1P41440 591 aa4.9□□□□□ -1.63
SCARNA15.2-201ENST00000516409 IDH3AP50213 366 aa4.9□□□□□ -1.63
SCARNA15.2-201ENST00000516409 WDR4P57081 412 aaKnown RBP4.9□□□□□ -1.63
SCARNA15.2-201ENST00000516409 C4orf17Q53FE4 359 aa4.9□□□□□ -1.63
SCARNA15.2-201ENST00000516409 GNASQ5JWF2 1037 aa4.9□□□□□ -1.63
SCARNA15.2-201ENST00000516409 MEI1Q5TIA1 1274 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms