RNA–Protein interactions for RNA: ENST00000516219.1

RN7SKP52-201, Transcript of RNA, 7SK small nuclear pseudogene 52, humanhuman

BASIC

Gene RN7SKP52, Length 250 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP52-201ENST00000516219 CNTNAP4Q9C0A0 1308 aa12.76□□□□□ -0.37
RN7SKP52-201ENST00000516219 PRELPP51888 382 aa12.75□□□□□ -0.37
RN7SKP52-201ENST00000516219 TRAPPC3LQ5T215 181 aa12.75□□□□□ -0.37
RN7SKP52-201ENST00000516219 RBM46Q8TBY0 533 aaKnown RBP12.75□□□□□ -0.37
RN7SKP52-201ENST00000516219 KLRG1Q96E93 195 aa12.75□□□□□ -0.37
RN7SKP52-201ENST00000516219 PLEKHG2Q9H7P9 1386 aa12.75□□□□□ -0.37
RN7SKP52-201ENST00000516219 CHRNA5P30532 468 aa12.74□□□□□ -0.37
RN7SKP52-201ENST00000516219 RASSF7Q02833 373 aa12.74□□□□□ -0.37
RN7SKP52-201ENST00000516219 JMYQ8N9B5 988 aa12.74□□□□□ -0.37
RN7SKP52-201ENST00000516219 DCAF5Q96JK2 942 aa12.74□□□□□ -0.37
RN7SKP52-201ENST00000516219 CCDC87Q9NVE4 849 aa12.74□□□□□ -0.37
RN7SKP52-201ENST00000516219 ARFGEF2Q9Y6D5 1785 aa12.74□□□□□ -0.37
RN7SKP52-201ENST00000516219 SCN7AQ01118 1682 aa12.73□□□□□ -0.37
RN7SKP52-201ENST00000516219 TNNT2P45379 298 aaPredicted RBP12.73□□□□□ -0.37
RN7SKP52-201ENST00000516219 FKBP8Q14318 412 aa12.73□□□□□ -0.37
RN7SKP52-201ENST00000516219 GSE1Q14687 1217 aa12.73□□□□□ -0.37
RN7SKP52-201ENST00000516219 GPR153Q6NV75 609 aa12.73□□□□□ -0.37
RN7SKP52-201ENST00000516219 NLGN1Q8N2Q7 840 aa12.73□□□□□ -0.37
RN7SKP52-201ENST00000516219 RNF181Q9P0P0 153 aa12.73□□□□□ -0.37
RN7SKP52-201ENST00000516219 RPS6KA4O75676 772 aa12.72□□□□□ -0.37
RN7SKP52-201ENST00000516219 HMGB2P26583 209 aaKnown RBP12.72□□□□□ -0.37
RN7SKP52-201ENST00000516219 RC3H1Q5TC82 1133 aaKnown RBP12.72□□□□□ -0.37
RN7SKP52-201ENST00000516219 RRAGCQ9HB90 399 aa12.72□□□□□ -0.37
RN7SKP52-201ENST00000516219 PARP3Q9Y6F1 533 aa12.72□□□□□ -0.37
RN7SKP52-201ENST00000516219 SIPA1L3O60292 1781 aaPredicted RBP12.71□□□□□ -0.37
RN7SKP52-201ENST00000516219 USP42Q9H9J4 1324 aaKnown RBP12.71□□□□□ -0.37
RN7SKP52-201ENST00000516219 RFC4P35249 363 aa12.71□□□□□ -0.37
RN7SKP52-201ENST00000516219 CRKLP46109 303 aaKnown RBP12.71□□□□□ -0.37
RN7SKP52-201ENST00000516219 AEBP1Q8IUX7 1158 aa12.71□□□□□ -0.37
RN7SKP52-201ENST00000516219 CARMIL3Q8ND23 1372 aa12.7□□□□□ -0.38
RN7SKP52-201ENST00000516219 PTCD1O75127 700 aaKnown RBP12.7□□□□□ -0.38
RN7SKP52-201ENST00000516219 BCORQ6W2J9 1755 aa12.7□□□□□ -0.38
RN7SKP52-201ENST00000516219 MRC1P22897 1456 aa12.7□□□□□ -0.38
RN7SKP52-201ENST00000516219 ERVV-2B6SEH9 535 aa12.69□□□□□ -0.38
RN7SKP52-201ENST00000516219 POLRMTO00411 1230 aaKnown RBP12.69□□□□□ -0.38
RN7SKP52-201ENST00000516219 ZNF530Q6P9A1 599 aaPredicted RBP12.69□□□□□ -0.38
RN7SKP52-201ENST00000516219 C16orf71Q8IYS4 520 aaPredicted RBP12.69□□□□□ -0.38
RN7SKP52-201ENST00000516219 PIM2Q9P1W9 311 aa12.69□□□□□ -0.38
RN7SKP52-201ENST00000516219 SLX4Q8IY92 1834 aa12.69□□□□□ -0.38
RN7SKP52-201ENST00000516219 FSTL1Q12841 308 aa12.68□□□□□ -0.38
RN7SKP52-201ENST00000516219 PDAP1Q13442 181 aaKnown RBP12.68□□□□□ -0.38
RN7SKP52-201ENST00000516219 DALRD3Q5D0E6 543 aaKnown RBP12.68□□□□□ -0.38
RN7SKP52-201ENST00000516219 KDM2BQ8NHM5 1336 aa12.67□□□□□ -0.38
RN7SKP52-201ENST00000516219 SLC24A1O60721 1099 aa12.67□□□□□ -0.38
RN7SKP52-201ENST00000516219 INTS5Q6P9B9 1019 aaKnown RBP12.67□□□□□ -0.38
RN7SKP52-201ENST00000516219 TNS4Q8IZW8 715 aa12.67□□□□□ -0.38
RN7SKP52-201ENST00000516219 TM4SF1P30408 202 aa12.66□□□□□ -0.38
RN7SKP52-201ENST00000516219 CABP4P57796 275 aa12.66□□□□□ -0.38
RN7SKP52-201ENST00000516219 USPL1Q5W0Q7 1092 aa12.66□□□□□ -0.38
RN7SKP52-201ENST00000516219 IRX2Q9BZI1 471 aaPredicted RBP12.66□□□□□ -0.38
RN7SKP52-201ENST00000516219 HSPA1AP0DMV8 641 aaKnown RBP12.65□□□□□ -0.38
RN7SKP52-201ENST00000516219 HSPA1BP0DMV9 641 aaKnown RBP12.65□□□□□ -0.38
RN7SKP52-201ENST00000516219 CHRM1P11229 460 aaPredicted RBP12.65□□□□□ -0.38
RN7SKP52-201ENST00000516219 DNAJC10Q8IXB1 793 aa12.65□□□□□ -0.38
RN7SKP52-201ENST00000516219 NFATC2IPQ8NCF5 419 aa12.65□□□□□ -0.38
RN7SKP52-201ENST00000516219 SOS1Q07889 1333 aaPredicted RBP12.64□□□□□ -0.39
RN7SKP52-201ENST00000516219 ZNF316A6NFI3 1004 aaPredicted RBP12.64□□□□□ -0.39
RN7SKP52-201ENST00000516219 POTECB2RU33 542 aa12.64□□□□□ -0.39
RN7SKP52-201ENST00000516219 CDCA8Q53HL2 280 aa12.64□□□□□ -0.39
RN7SKP52-201ENST00000516219 BCL2L12Q9HB09 334 aa12.64□□□□□ -0.39
RN7SKP52-201ENST00000516219 COL15A1P39059 1388 aa12.64□□□□□ -0.39
RN7SKP52-201ENST00000516219 NFKBIEO00221 500 aa12.63□□□□□ -0.39
RN7SKP52-201ENST00000516219 PLEKHO1Q53GL0 409 aaPredicted RBP12.63□□□□□ -0.39
RN7SKP52-201ENST00000516219 ARSIQ5FYB1 569 aa12.63□□□□□ -0.39
RN7SKP52-201ENST00000516219 SMC1BQ8NDV3 1235 aa12.63□□□□□ -0.39
RN7SKP52-201ENST00000516219 POLR3GLQ9BT43 218 aa12.63□□□□□ -0.39
RN7SKP52-201ENST00000516219 ADAMTSL1Q8N6G6 1762 aa12.62□□□□□ -0.39
RN7SKP52-201ENST00000516219 HSP90AB1P08238 724 aaKnown RBP12.62□□□□□ -0.39
RN7SKP52-201ENST00000516219 MTHFSP49914 203 aa12.62□□□□□ -0.39
RN7SKP52-201ENST00000516219 SLC39A6Q13433 755 aa12.62□□□□□ -0.39
RN7SKP52-201ENST00000516219 NFIXQ14938 502 aa12.62□□□□□ -0.39
RN7SKP52-201ENST00000516219 ZBTB1Q9Y2K1 713 aa12.62□□□□□ -0.39
RN7SKP52-201ENST00000516219 SCN4AP35499 1836 aa12.61□□□□□ -0.39
RN7SKP52-201ENST00000516219 PBX2P40425 430 aa12.61□□□□□ -0.39
RN7SKP52-201ENST00000516219 LGR6Q9HBX8 967 aa12.61□□□□□ -0.39
RN7SKP52-201ENST00000516219 GLTPD2A6NH11 291 aa12.6□□□□□ -0.39
RN7SKP52-201ENST00000516219 CYP19A1P11511 503 aaPredicted RBP12.6□□□□□ -0.39
RN7SKP52-201ENST00000516219 SULT6B1Q6IMI4 303 aa12.6□□□□□ -0.39
RN7SKP52-201ENST00000516219 LMNB1P20700 586 aa12.59□□□□□ -0.39
RN7SKP52-201ENST00000516219 AMOTQ4VCS5 1084 aa12.59□□□□□ -0.39
RN7SKP52-201ENST00000516219 C1orf141Q5JVX7 400 aa12.59□□□□□ -0.39
RN7SKP52-201ENST00000516219 CCDC24Q8N4L8 307 aa12.59□□□□□ -0.39
RN7SKP52-201ENST00000516219 ZC3H4Q9UPT8 1303 aaKnown RBP12.59□□□□□ -0.39
RN7SKP52-201ENST00000516219 SERPINB2P05120 415 aa12.58□□□□□ -0.4
RN7SKP52-201ENST00000516219 NARFQ9UHQ1 456 aa12.58□□□□□ -0.4
RN7SKP52-201ENST00000516219 ZPR1O75312 459 aa12.57□□□□□ -0.4
RN7SKP52-201ENST00000516219 RGS20O76081 388 aa12.57□□□□□ -0.4
RN7SKP52-201ENST00000516219 VEGFAP15692 232 aaPredicted RBP12.57□□□□□ -0.4
RN7SKP52-201ENST00000516219 IL13P35225 146 aa12.57□□□□□ -0.4
RN7SKP52-201ENST00000516219 C2CD5Q86YS7 1000 aa12.57□□□□□ -0.4
RN7SKP52-201ENST00000516219 PANK3Q9H999 370 aa12.57□□□□□ -0.4
RN7SKP52-201ENST00000516219 SLC52A2Q9HAB3 445 aa12.57□□□□□ -0.4
RN7SKP52-201ENST00000516219 BICDL1Q6ZP65 573 aa12.56□□□□□ -0.4
RN7SKP52-201ENST00000516219 TTLL6Q8N841 843 aa12.56□□□□□ -0.4
RN7SKP52-201ENST00000516219 MKRN1Q9UHC7 482 aaKnown RBP12.56□□□□□ -0.4
RN7SKP52-201ENST00000516219 LTBP1Q14766 1721 aa12.56□□□□□ -0.4
RN7SKP52-201ENST00000516219 RNMTO43148 476 aaKnown RBP12.55□□□□□ -0.4
RN7SKP52-201ENST00000516219 C21orf2O43822 256 aa12.54□□□□□ -0.4
RN7SKP52-201ENST00000516219 HMOX1P09601 288 aa12.54□□□□□ -0.4
RN7SKP52-201ENST00000516219 CANXP27824 592 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms