RNA–Protein interactions for RNA: ENST00000515829.6

SMG7-215, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMG7, Length 5,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-215ENST00000515829 EDC4Q6P2E9 1401 aaKnown RBP12.05□□□□□ -0.48
SMG7-215ENST00000515829 ANO6Q4KMQ2 910 aa12.05□□□□□ -0.48
SMG7-215ENST00000515829 THEMISQ8N1K5 641 aaPredicted RBP12.05□□□□□ -0.48
SMG7-215ENST00000515829 SNX14Q9Y5W7 946 aa12.05□□□□□ -0.48
SMG7-215ENST00000515829 MAP3K4Q9Y6R4 1608 aa12.05□□□□□ -0.48
SMG7-215ENST00000515829 KRT32Q14532 448 aa12.05□□□□□ -0.48
SMG7-215ENST00000515829 UNC5CLQ8IV45 518 aa12.05□□□□□ -0.48
SMG7-215ENST00000515829 ZNF853P0CG23 659 aa12.04□□□□□ -0.48
SMG7-215ENST00000515829 BRPF1P55201 1214 aaPredicted RBP12.04□□□□□ -0.48
SMG7-215ENST00000515829 NBPF7P0C2Y1 421 aaPredicted RBP12.04□□□□□ -0.48
SMG7-215ENST00000515829 AMOTL1Q8IY63 956 aa12.04□□□□□ -0.48
SMG7-215ENST00000515829 PRIMPOLQ96LW4 560 aa12.04□□□□□ -0.48
SMG7-215ENST00000515829 CEP57L1Q8IYX8 460 aa12.04□□□□□ -0.48
SMG7-215ENST00000515829 NMIQ13287 307 aaPredicted RBP12.03□□□□□ -0.48
SMG7-215ENST00000515829 LUZP1Q86V48 1076 aa12.03□□□□□ -0.48
SMG7-215ENST00000515829 E9PCH4 1651 aa12.03□□□□□ -0.48
SMG7-215ENST00000515829 PTGS1P23219 599 aa12.03□□□□□ -0.48
SMG7-215ENST00000515829 DNAJC25Q9H1X3 360 aa12.03□□□□□ -0.48
SMG7-215ENST00000515829 PIP4K2AP48426 406 aaPredicted RBP12.02□□□□□ -0.48
SMG7-215ENST00000515829 ATP5J2-PTCD1G3V325 749 aa12.02□□□□□ -0.48
SMG7-215ENST00000515829 PTCD1O75127 700 aaKnown RBP12.02□□□□□ -0.48
SMG7-215ENST00000515829 SERPINC1P01008 464 aa12.02□□□□□ -0.48
SMG7-215ENST00000515829 FAM200AQ8TCP9 573 aa12.02□□□□□ -0.48
SMG7-215ENST00000515829 DDX19AQ9NUU7 478 aaKnown RBP12.02□□□□□ -0.48
SMG7-215ENST00000515829 SGSM2O43147 1006 aa12.02□□□□□ -0.49
SMG7-215ENST00000515829 TNNT3P45378 269 aaPredicted RBP12.02□□□□□ -0.49
SMG7-215ENST00000515829 PTPN14Q15678 1187 aa12.02□□□□□ -0.49
SMG7-215ENST00000515829 RAB11FIP4Q86YS3 637 aa12.02□□□□□ -0.49
SMG7-215ENST00000515829 BRF1Q92994 677 aa12.02□□□□□ -0.49
SMG7-215ENST00000515829 LRRC59Q96AG4 307 aaKnown RBP12.02□□□□□ -0.49
SMG7-215ENST00000515829 NOL10Q9BSC4 688 aaKnown RBP12.02□□□□□ -0.49
SMG7-215ENST00000515829 KIF1BO60333 1816 aa12.02□□□□□ -0.49
SMG7-215ENST00000515829 A0A0U1RQG5 324 aaPredicted RBP12.02□□□□□ -0.49
SMG7-215ENST00000515829 MARCH6O60337 910 aa12.02□□□□□ -0.49
SMG7-215ENST00000515829 LARP1Q6PKG0 1096 aaKnown RBP12.02□□□□□ -0.49
SMG7-215ENST00000515829 PHF8Q9UPP1 1060 aa12.02□□□□□ -0.49
SMG7-215ENST00000515829 FLT4P35916 1363 aa12.02□□□□□ -0.49
SMG7-215ENST00000515829 TATP17735 454 aaPredicted RBP12.02□□□□□ -0.49
SMG7-215ENST00000515829 OLFM4Q6UX06 510 aa12.02□□□□□ -0.49
SMG7-215ENST00000515829 DDX46Q7L014 1031 aaKnown RBP12.02□□□□□ -0.49
SMG7-215ENST00000515829 LAMC1P11047 1609 aa12.01□□□□□ -0.49
SMG7-215ENST00000515829 BIN1O00499 593 aa12.01□□□□□ -0.49
SMG7-215ENST00000515829 IGSF3O75054 1194 aa12.01□□□□□ -0.49
SMG7-215ENST00000515829 TYRO3Q06418 890 aa12.01□□□□□ -0.49
SMG7-215ENST00000515829 CREB3L3Q68CJ9 461 aa12.01□□□□□ -0.49
SMG7-215ENST00000515829 NEK1Q96PY6 1258 aa12.01□□□□□ -0.49
SMG7-215ENST00000515829 TET3O43151 1660 aa12.01□□□□□ -0.49
SMG7-215ENST00000515829 TTC39AQ5SRH9 613 aa12.01□□□□□ -0.49
SMG7-215ENST00000515829 USP44Q9H0E7 712 aa12.01□□□□□ -0.49
SMG7-215ENST00000515829 HSPA4P34932 840 aa12.01□□□□□ -0.49
SMG7-215ENST00000515829 NOC3LQ8WTT2 800 aaKnown RBP12.01□□□□□ -0.49
SMG7-215ENST00000515829 TPM1P09493 284 aa12□□□□□ -0.49
SMG7-215ENST00000515829 ATF3P18847 181 aa12□□□□□ -0.49
SMG7-215ENST00000515829 SLC39A6Q13433 755 aa12□□□□□ -0.49
SMG7-215ENST00000515829 TTLL5Q6EMB2 1281 aa12□□□□□ -0.49
SMG7-215ENST00000515829 ISM2Q6H9L7 571 aa12□□□□□ -0.49
SMG7-215ENST00000515829 ZCCHC11Q5TAX3 1644 aaKnown RBP12□□□□□ -0.49
SMG7-215ENST00000515829 ABCA6Q8N139 1617 aa12□□□□□ -0.49
SMG7-215ENST00000515829 UHRF1BP1LA0JNW5 1464 aa12□□□□□ -0.49
SMG7-215ENST00000515829 CABP4P57796 275 aa12□□□□□ -0.49
SMG7-215ENST00000515829 UBE3BQ7Z3V4 1068 aa12□□□□□ -0.49
SMG7-215ENST00000515829 CCAR1Q8IX12 1150 aaKnown RBP12□□□□□ -0.49
SMG7-215ENST00000515829 GOLGA6L1Q8N7Z2 621 aa12□□□□□ -0.49
SMG7-215ENST00000515829 SPHKAPQ2M3C7 1700 aa12□□□□□ -0.49
SMG7-215ENST00000515829 TSR1Q2NL82 804 aaKnown RBP12□□□□□ -0.49
SMG7-215ENST00000515829 RRP12Q5JTH9 1297 aaKnown RBP12□□□□□ -0.49
SMG7-215ENST00000515829 FSIP1Q8NA03 581 aa12□□□□□ -0.49
SMG7-215ENST00000515829 KLHDC4Q8TBB5 520 aa12□□□□□ -0.49
SMG7-215ENST00000515829 GOLIM4O00461 696 aa12□□□□□ -0.49
SMG7-215ENST00000515829 DHX16O60231 1041 aaKnown RBP12□□□□□ -0.49
SMG7-215ENST00000515829 SYTL4Q96C24 671 aaPredicted RBP12□□□□□ -0.49
SMG7-215ENST00000515829 FAM227BQ96M60 508 aa12□□□□□ -0.49
SMG7-215ENST00000515829 ARGLU1Q9NWB6 273 aaPredicted RBP12□□□□□ -0.49
SMG7-215ENST00000515829 SHROOM2Q13796 1616 aa12□□□□□ -0.49
SMG7-215ENST00000515829 CCDC158Q5M9N0 1113 aa12□□□□□ -0.49
SMG7-215ENST00000515829 RUFY3Q7L099 469 aa12□□□□□ -0.49
SMG7-215ENST00000515829 LGR6Q9HBX8 967 aa12□□□□□ -0.49
SMG7-215ENST00000515829 HYPKQ9NX55 129 aa12□□□□□ -0.49
SMG7-215ENST00000515829 RAD50Q92878 1312 aa11.99□□□□□ -0.49
SMG7-215ENST00000515829 KIF24Q5T7B8 1368 aa11.99□□□□□ -0.49
SMG7-215ENST00000515829 A0A087WZG4 1122 aa11.99□□□□□ -0.49
SMG7-215ENST00000515829 VPS53Q5VIR6 699 aa11.99□□□□□ -0.49
SMG7-215ENST00000515829 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.99□□□□□ -0.49
SMG7-215ENST00000515829 HOOK1Q9UJC3 728 aaKnown RBP11.99□□□□□ -0.49
SMG7-215ENST00000515829 V9GYY5 206 aaPredicted RBP11.99□□□□□ -0.49
SMG7-215ENST00000515829 FAM135BQ49AJ0 1406 aa11.99□□□□□ -0.49
SMG7-215ENST00000515829 ZNF500O60304 480 aaPredicted RBP11.99□□□□□ -0.49
SMG7-215ENST00000515829 POLR3DP05423 398 aaPredicted RBP11.99□□□□□ -0.49
SMG7-215ENST00000515829 PDIA4P13667 645 aaKnown RBP11.99□□□□□ -0.49
SMG7-215ENST00000515829 SAFBQ15424 915 aaKnown RBP eCLIP11.99□□□□□ -0.49
SMG7-215ENST00000515829 TTC21AQ8NDW8 1320 aa11.99□□□□□ -0.49
SMG7-215ENST00000515829 KIAA0232Q92628 1395 aa11.99□□□□□ -0.49
SMG7-215ENST00000515829 ERICH4A6NGS2 130 aa11.99□□□□□ -0.49
SMG7-215ENST00000515829 GRM8O00222 908 aa11.98□□□□□ -0.49
SMG7-215ENST00000515829 HOXC9P31274 260 aa11.98□□□□□ -0.49
SMG7-215ENST00000515829 HAND2P61296 217 aa11.98□□□□□ -0.49
SMG7-215ENST00000515829 RASEFQ8IZ41 740 aa11.98□□□□□ -0.49
SMG7-215ENST00000515829 SNRKQ9NRH2 765 aa11.98□□□□□ -0.49
SMG7-215ENST00000515829 ANO10Q9NW15 660 aa11.98□□□□□ -0.49
SMG7-215ENST00000515829 Q6ZUG5 572 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms