RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 A1BGP04217 495 aa19.05■□□□□ 0.64
THUMPD3-210ENST00000515662 NUTM2AQ8IVF1 878 aaPredicted RBP19.05■□□□□ 0.64
THUMPD3-210ENST00000515662 ASAP1Q9ULH1 1129 aa19.05■□□□□ 0.64
THUMPD3-210ENST00000515662 SPATA31A1Q5TZJ5 1347 aa19.05■□□□□ 0.64
THUMPD3-210ENST00000515662 MX1P20591 662 aa19.05■□□□□ 0.64
THUMPD3-210ENST00000515662 ITGB4P16144 1822 aa19.05■□□□□ 0.64
THUMPD3-210ENST00000515662 RBM25P49756 843 aaKnown RBP19.04■□□□□ 0.64
THUMPD3-210ENST00000515662 HSP90AB4PQ58FF6 505 aa19.04■□□□□ 0.64
THUMPD3-210ENST00000515662 RHPN1Q8TCX5 695 aa19.04■□□□□ 0.64
THUMPD3-210ENST00000515662 STAP2Q9UGK3 403 aa19.04■□□□□ 0.64
THUMPD3-210ENST00000515662 KIF1BPQ96EK5 621 aa19.04■□□□□ 0.64
THUMPD3-210ENST00000515662 CDCA7Q9BWT1 371 aaPredicted RBP19.04■□□□□ 0.64
THUMPD3-210ENST00000515662 IL1RAPL2Q9NP60 686 aa19.04■□□□□ 0.64
THUMPD3-210ENST00000515662 ATG3Q9NT62 314 aa19.04■□□□□ 0.64
THUMPD3-210ENST00000515662 THRAP3Q9Y2W1 955 aaKnown RBP19.04■□□□□ 0.64
THUMPD3-210ENST00000515662 BICC1Q9H694 974 aaKnown RBP19.03■□□□□ 0.64
THUMPD3-210ENST00000515662 BCL9O00512 1426 aa19.03■□□□□ 0.64
THUMPD3-210ENST00000515662 UBAP1LF5GYI3 381 aa19.03■□□□□ 0.64
THUMPD3-210ENST00000515662 VSIG10Q8N0Z9 540 aa19.03■□□□□ 0.64
THUMPD3-210ENST00000515662 BECN1Q14457 450 aa19.02■□□□□ 0.64
THUMPD3-210ENST00000515662 TSHZ3Q63HK5 1081 aa19.02■□□□□ 0.64
THUMPD3-210ENST00000515662 TTLL7Q6ZT98 887 aa19.01■□□□□ 0.63
THUMPD3-210ENST00000515662 NWD2Q9ULI1 1742 aa19.01■□□□□ 0.63
THUMPD3-210ENST00000515662 AOX1Q06278 1338 aa19.01■□□□□ 0.63
THUMPD3-210ENST00000515662 EIF5BO60841 1220 aaKnown RBP19.01■□□□□ 0.63
THUMPD3-210ENST00000515662 SLIT2O94813 1529 aa19.01■□□□□ 0.63
THUMPD3-210ENST00000515662 AFDNP55196 1824 aaKnown RBP19.01■□□□□ 0.63
THUMPD3-210ENST00000515662 NUP188Q5SRE5 1749 aa19.01■□□□□ 0.63
THUMPD3-210ENST00000515662 ATP5J2-PTCD1G3V325 749 aa19■□□□□ 0.63
THUMPD3-210ENST00000515662 TEX13AQ9BXU3 409 aaPredicted RBP19■□□□□ 0.63
THUMPD3-210ENST00000515662 TUBGCP6Q96RT7 1819 aa19■□□□□ 0.63
THUMPD3-210ENST00000515662 SPATA31A5Q5VU36 1347 aa19■□□□□ 0.63
THUMPD3-210ENST00000515662 SPATA31A7Q8IWB4 1347 aa19■□□□□ 0.63
THUMPD3-210ENST00000515662 RTL5Q5HYW3 569 aaPredicted RBP19■□□□□ 0.63
THUMPD3-210ENST00000515662 OS9Q13438 667 aaPredicted RBP18.99■□□□□ 0.63
THUMPD3-210ENST00000515662 NUTM1Q86Y26 1132 aa18.99■□□□□ 0.63
THUMPD3-210ENST00000515662 CASC1Q6TDU7 716 aa18.99■□□□□ 0.63
THUMPD3-210ENST00000515662 DNAJC10Q8IXB1 793 aa18.99■□□□□ 0.63
THUMPD3-210ENST00000515662 PA2G4Q9UQ80 394 aaKnown RBP18.99■□□□□ 0.63
THUMPD3-210ENST00000515662 COL15A1P39059 1388 aa18.99■□□□□ 0.63
THUMPD3-210ENST00000515662 DDB1Q16531 1140 aa18.98■□□□□ 0.63
THUMPD3-210ENST00000515662 EPHA10Q5JZY3 1008 aa18.98■□□□□ 0.63
THUMPD3-210ENST00000515662 ERC1Q8IUD2 1116 aa18.98■□□□□ 0.63
THUMPD3-210ENST00000515662 RBM42Q9BTD8 480 aaKnown RBP18.98■□□□□ 0.63
THUMPD3-210ENST00000515662 UBE3BQ7Z3V4 1068 aa18.97■□□□□ 0.63
THUMPD3-210ENST00000515662 JARID2Q92833 1246 aaPredicted RBP18.97■□□□□ 0.63
THUMPD3-210ENST00000515662 TBC1D2Q9BYX2 928 aa18.97■□□□□ 0.63
THUMPD3-210ENST00000515662 A0A087WZG4 1122 aa18.97■□□□□ 0.63
THUMPD3-210ENST00000515662 CASP7P55210 303 aa18.97■□□□□ 0.63
THUMPD3-210ENST00000515662 DOT1LQ8TEK3 1739 aa18.96■□□□□ 0.63
THUMPD3-210ENST00000515662 STARD3NLO95772 234 aa18.96■□□□□ 0.63
THUMPD3-210ENST00000515662 PRIM1P49642 420 aaKnown RBP18.96■□□□□ 0.63
THUMPD3-210ENST00000515662 SYTL4Q96C24 671 aaPredicted RBP18.96■□□□□ 0.63
THUMPD3-210ENST00000515662 ZBTB3Q9H5J0 574 aa18.96■□□□□ 0.63
THUMPD3-210ENST00000515662 BARGINQ6ZT62 677 aa18.96■□□□□ 0.63
THUMPD3-210ENST00000515662 SLC4A9Q96Q91 983 aa18.95■□□□□ 0.62
THUMPD3-210ENST00000515662 RABL6Q3YEC7 729 aaPredicted RBP18.95■□□□□ 0.62
THUMPD3-210ENST00000515662 KIF2CQ99661 725 aa18.95■□□□□ 0.62
THUMPD3-210ENST00000515662 CCDC9Q9Y3X0 531 aaKnown RBP18.95■□□□□ 0.62
THUMPD3-210ENST00000515662 H7C1W4 665 aa18.94■□□□□ 0.62
THUMPD3-210ENST00000515662 CLASRPQ8N2M8 674 aaKnown RBP18.94■□□□□ 0.62
THUMPD3-210ENST00000515662 PI4K2BQ8TCG2 481 aa18.94■□□□□ 0.62
THUMPD3-210ENST00000515662 CWC25Q9NXE8 425 aaPredicted RBP18.94■□□□□ 0.62
THUMPD3-210ENST00000515662 USP42Q9H9J4 1324 aaKnown RBP18.94■□□□□ 0.62
THUMPD3-210ENST00000515662 JCADQ9P266 1359 aa18.94■□□□□ 0.62
THUMPD3-210ENST00000515662 G3BP1Q13283 466 aaKnown RBP eCLIP18.93■□□□□ 0.62
THUMPD3-210ENST00000515662 MARCH10Q8NA82 808 aaPredicted RBP18.93■□□□□ 0.62
THUMPD3-210ENST00000515662 TRIM6-TRIM34B2RNG4 842 aa18.93■□□□□ 0.62
THUMPD3-210ENST00000515662 USP26Q9BXU7 913 aa18.93■□□□□ 0.62
THUMPD3-210ENST00000515662 TJP1Q07157 1748 aa18.93■□□□□ 0.62
THUMPD3-210ENST00000515662 SASH1O94885 1247 aa18.92■□□□□ 0.62
THUMPD3-210ENST00000515662 CYP19A1P11511 503 aaPredicted RBP18.92■□□□□ 0.62
THUMPD3-210ENST00000515662 UNC5CLQ8IV45 518 aa18.92■□□□□ 0.62
THUMPD3-210ENST00000515662 CCDC191Q8NCU4 936 aa18.92■□□□□ 0.62
THUMPD3-210ENST00000515662 RILPL2Q969X0 211 aa18.92■□□□□ 0.62
THUMPD3-210ENST00000515662 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.92■□□□□ 0.62
THUMPD3-210ENST00000515662 ERC2O15083 957 aa18.92■□□□□ 0.62
THUMPD3-210ENST00000515662 TTC41PQ6P2S7 1318 aa18.92■□□□□ 0.62
THUMPD3-210ENST00000515662 RFX5P48382 616 aaPredicted RBP18.91■□□□□ 0.62
THUMPD3-210ENST00000515662 KLHDC4Q8TBB5 520 aa18.91■□□□□ 0.62
THUMPD3-210ENST00000515662 COPRSQ9NQ92 184 aa18.91■□□□□ 0.62
THUMPD3-210ENST00000515662 ZNF330Q9Y3S2 320 aaPredicted RBP18.91■□□□□ 0.62
THUMPD3-210ENST00000515662 REC8O95072 547 aa18.91■□□□□ 0.62
THUMPD3-210ENST00000515662 C8orf37Q96NL8 207 aa18.9■□□□□ 0.62
THUMPD3-210ENST00000515662 ISCA1Q9BUE6 129 aa18.9■□□□□ 0.62
THUMPD3-210ENST00000515662 SIL1Q9H173 461 aa18.9■□□□□ 0.62
THUMPD3-210ENST00000515662 CHMLP26374 656 aa18.9■□□□□ 0.62
THUMPD3-210ENST00000515662 FOXO4P98177 505 aa18.9■□□□□ 0.62
THUMPD3-210ENST00000515662 TCIRG1Q13488 830 aa18.9■□□□□ 0.62
THUMPD3-210ENST00000515662 KIF6Q6ZMV9 814 aa18.9■□□□□ 0.62
THUMPD3-210ENST00000515662 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.9■□□□□ 0.62
THUMPD3-210ENST00000515662 BCL9LQ86UU0 1499 aa18.9■□□□□ 0.62
THUMPD3-210ENST00000515662 IFIT2P09913 472 aaKnown RBP18.89■□□□□ 0.61
THUMPD3-210ENST00000515662 SNX21Q969T3 373 aa18.89■□□□□ 0.61
THUMPD3-210ENST00000515662 NGLY1Q96IV0 654 aa18.89■□□□□ 0.61
THUMPD3-210ENST00000515662 PTPN12Q05209 780 aaKnown RBP18.89■□□□□ 0.61
THUMPD3-210ENST00000515662 AACSQ86V21 672 aa18.89■□□□□ 0.61
THUMPD3-210ENST00000515662 ESYT1Q9BSJ8 1104 aa18.89■□□□□ 0.61
THUMPD3-210ENST00000515662 GLRX3O76003 335 aaKnown RBP18.88■□□□□ 0.61
THUMPD3-210ENST00000515662 TRIM28Q13263 835 aaKnown RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms