RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 TBC1D9BQ66K14 1250 aa33.49■■■□□ 2.95
DDR1-279ENST00000515529 MAP3K15Q6ZN16 1313 aa33.49■■■□□ 2.95
DDR1-279ENST00000515529 BCORQ6W2J9 1755 aa33.48■■■□□ 2.95
DDR1-279ENST00000515529 ERVV-1B6SEH8 477 aa33.48■■■□□ 2.95
DDR1-279ENST00000515529 RGL2O15211 777 aa33.48■■■□□ 2.95
DDR1-279ENST00000515529 TTLL7Q6ZT98 887 aa33.48■■■□□ 2.95
DDR1-279ENST00000515529 TSPYL6Q8N831 410 aa33.48■■■□□ 2.95
DDR1-279ENST00000515529 SETDB2Q96T68 719 aa33.48■■■□□ 2.95
DDR1-279ENST00000515529 SPINK5Q9NQ38 1064 aaPredicted RBP33.48■■■□□ 2.95
DDR1-279ENST00000515529 AIMP1Q12904 312 aaKnown RBP33.47■■■□□ 2.95
DDR1-279ENST00000515529 HYPKQ9NX55 129 aa33.47■■■□□ 2.95
DDR1-279ENST00000515529 XAGE3Q8WTP9 111 aa33.46■■■□□ 2.95
DDR1-279ENST00000515529 ZBTB3Q9H5J0 574 aa33.46■■■□□ 2.95
DDR1-279ENST00000515529 DCAF8L1A6NGE4 600 aa33.45■■■□□ 2.95
DDR1-279ENST00000515529 E9PSI1 815 aa33.45■■■□□ 2.95
DDR1-279ENST00000515529 SERPINB2P05120 415 aa33.45■■■□□ 2.95
DDR1-279ENST00000515529 COPS6Q7L5N1 327 aa33.45■■■□□ 2.95
DDR1-279ENST00000515529 CARMIL3Q8ND23 1372 aa33.45■■■□□ 2.94
DDR1-279ENST00000515529 NPHP1O15259 732 aa33.44■■■□□ 2.94
DDR1-279ENST00000515529 EXOSC9Q06265 439 aaKnown RBP33.44■■■□□ 2.94
DDR1-279ENST00000515529 LRP10Q7Z4F1 713 aa33.44■■■□□ 2.94
DDR1-279ENST00000515529 STK31Q9BXU1 1019 aa33.44■■■□□ 2.94
DDR1-279ENST00000515529 HLFQ16534 295 aa33.43■■■□□ 2.94
DDR1-279ENST00000515529 NLGN2Q8NFZ4 835 aa33.42■■■□□ 2.94
DDR1-279ENST00000515529 NIP7Q9Y221 180 aaKnown RBP eCLIP33.42■■■□□ 2.94
DDR1-279ENST00000515529 C10orf71Q711Q0 1435 aa33.4■■■□□ 2.94
DDR1-279ENST00000515529 HNRNPUQ00839 825 aaKnown RBP eCLIP33.4■■■□□ 2.94
DDR1-279ENST00000515529 GIGYF2Q6Y7W6 1299 aaKnown RBP33.38■■■□□ 2.93
DDR1-279ENST00000515529 NBPF5PQ86XG9 351 aaPredicted RBP33.37■■■□□ 2.93
DDR1-279ENST00000515529 TGFB2P61812 414 aa33.36■■■□□ 2.93
DDR1-279ENST00000515529 SLFN5Q08AF3 891 aa33.36■■■□□ 2.93
DDR1-279ENST00000515529 CNBD1Q8NA66 436 aa33.36■■■□□ 2.93
DDR1-279ENST00000515529 TCERG1O14776 1098 aaKnown RBP33.35■■■□□ 2.93
DDR1-279ENST00000515529 VAMP4O75379 141 aa33.35■■■□□ 2.93
DDR1-279ENST00000515529 HSP90AB3PQ58FF7 597 aa33.35■■■□□ 2.93
DDR1-279ENST00000515529 ATP10DQ9P241 1426 aa33.35■■■□□ 2.93
DDR1-279ENST00000515529 ST5P78524 1137 aa33.34■■■□□ 2.93
DDR1-279ENST00000515529 ANKRD13DQ6ZTN6 518 aa33.34■■■□□ 2.93
DDR1-279ENST00000515529 PELP1Q8IZL8 1130 aaKnown RBP33.34■■■□□ 2.93
DDR1-279ENST00000515529 PLBD2Q8NHP8 589 aa33.34■■■□□ 2.93
DDR1-279ENST00000515529 FAM177BA6PVY3 158 aa33.33■■■□□ 2.93
DDR1-279ENST00000515529 GPTP24298 496 aa33.33■■■□□ 2.93
DDR1-279ENST00000515529 CDCA7LQ96GN5 454 aa33.33■■■□□ 2.93
DDR1-279ENST00000515529 PHAXQ9H814 394 aaKnown RBP33.33■■■□□ 2.93
DDR1-279ENST00000515529 AFDNP55196 1824 aaKnown RBP33.32■■■□□ 2.93
DDR1-279ENST00000515529 DDX58O95786 925 aaKnown RBP33.32■■■□□ 2.92
DDR1-279ENST00000515529 GTF2E1P29083 439 aaPredicted RBP33.32■■■□□ 2.92
DDR1-279ENST00000515529 TPTE2Q6XPS3 522 aa33.32■■■□□ 2.92
DDR1-279ENST00000515529 NUP98P52948 1817 aa33.32■■■□□ 2.92
DDR1-279ENST00000515529 NRXN2Q9P2S2 1712 aa33.31■■■□□ 2.92
DDR1-279ENST00000515529 KIF13BQ9NQT8 1826 aa33.31■■■□□ 2.92
DDR1-279ENST00000515529 GPR162Q16538 588 aa33.31■■■□□ 2.92
DDR1-279ENST00000515529 PRR5LQ6MZQ0 368 aa33.31■■■□□ 2.92
DDR1-279ENST00000515529 RIC3Q7Z5B4 369 aa33.31■■■□□ 2.92
DDR1-279ENST00000515529 SLC4A2P04920 1241 aa33.3■■■□□ 2.92
DDR1-279ENST00000515529 NYXQ9GZU5 481 aa33.3■■■□□ 2.92
DDR1-279ENST00000515529 PARP10Q53GL7 1025 aa33.29■■■□□ 2.92
DDR1-279ENST00000515529 ZNF34Q8IZ26 560 aa33.29■■■□□ 2.92
DDR1-279ENST00000515529 A0A0G2JLW4 131 aa33.28■■■□□ 2.92
DDR1-279ENST00000515529 PXDNLA1KZ92 1463 aa33.28■■■□□ 2.92
DDR1-279ENST00000515529 DPEP1P16444 411 aa33.27■■■□□ 2.92
DDR1-279ENST00000515529 TCIRG1Q13488 830 aa33.27■■■□□ 2.92
DDR1-279ENST00000515529 PPP1R42Q7Z4L9 355 aa33.27■■■□□ 2.92
DDR1-279ENST00000515529 CCDC24Q8N4L8 307 aa33.27■■■□□ 2.92
DDR1-279ENST00000515529 BRIP1Q9BX63 1249 aa33.26■■■□□ 2.91
DDR1-279ENST00000515529 PDE6BP35913 854 aa33.25■■■□□ 2.91
DDR1-279ENST00000515529 UBN2Q6ZU65 1347 aa33.25■■■□□ 2.91
DDR1-279ENST00000515529 WWC3Q9ULE0 1092 aa33.24■■■□□ 2.91
DDR1-279ENST00000515529 PDZRN3Q9UPQ7 1066 aa33.23■■■□□ 2.91
DDR1-279ENST00000515529 IBTKQ9P2D0 1353 aaPredicted RBP33.22■■■□□ 2.91
DDR1-279ENST00000515529 H0YIN7 160 aa33.22■■■□□ 2.91
DDR1-279ENST00000515529 CHRNA5P30532 468 aa33.22■■■□□ 2.91
DDR1-279ENST00000515529 SUSD4Q5VX71 490 aa33.22■■■□□ 2.91
DDR1-279ENST00000515529 C2CD5Q86YS7 1000 aa33.22■■■□□ 2.91
DDR1-279ENST00000515529 TRMT2AQ8IZ69 625 aaKnown RBP33.22■■■□□ 2.91
DDR1-279ENST00000515529 FLIIQ13045 1269 aa33.21■■■□□ 2.91
DDR1-279ENST00000515529 UTP14AQ9BVJ6 771 aaKnown RBP33.21■■■□□ 2.91
DDR1-279ENST00000515529 N4BP2Q86UW6 1770 aaPredicted RBP33.21■■■□□ 2.91
DDR1-279ENST00000515529 KSR2Q6VAB6 950 aa33.2■■■□□ 2.91
DDR1-279ENST00000515529 G2E3Q7L622 706 aa33.2■■■□□ 2.91
DDR1-279ENST00000515529 PIM2Q9P1W9 311 aa33.2■■■□□ 2.91
DDR1-279ENST00000515529 FKBP5Q13451 457 aaPredicted RBP33.19■■■□□ 2.9
DDR1-279ENST00000515529 NLRP10Q86W26 655 aa33.19■■■□□ 2.9
DDR1-279ENST00000515529 NUTM1Q86Y26 1132 aa33.19■■■□□ 2.9
DDR1-279ENST00000515529 ANKRD36CQ5JPF3 1778 aa33.19■■■□□ 2.9
DDR1-279ENST00000515529 ATP5J2-PTCD1G3V325 749 aa33.18■■■□□ 2.9
DDR1-279ENST00000515529 ZNF428Q96B54 188 aa33.18■■■□□ 2.9
DDR1-279ENST00000515529 MAP3K2Q9Y2U5 619 aa33.18■■■□□ 2.9
DDR1-279ENST00000515529 ZBED9Q6R2W3 1325 aa33.18■■■□□ 2.9
DDR1-279ENST00000515529 KIAA1551Q9HCM1 1747 aa33.17■■■□□ 2.9
DDR1-279ENST00000515529 ARFGEF2Q9Y6D5 1785 aa33.17■■■□□ 2.9
DDR1-279ENST00000515529 PI4KAP2A4QPH2 592 aa33.17■■■□□ 2.9
DDR1-279ENST00000515529 NTSR2O95665 410 aa33.17■■■□□ 2.9
DDR1-279ENST00000515529 ERFEQ4G0M1 354 aa33.17■■■□□ 2.9
DDR1-279ENST00000515529 PI4KAP1Q8N8J0 262 aa33.17■■■□□ 2.9
DDR1-279ENST00000515529 MYD88Q99836 296 aa33.17■■■□□ 2.9
DDR1-279ENST00000515529 BCS1LQ9Y276 419 aa33.17■■■□□ 2.9
DDR1-279ENST00000515529 CACNA1FO60840 1977 aa33.16■■■□□ 2.9
DDR1-279ENST00000515529 CT47B1P0C2W7 299 aaPredicted RBP33.16■■■□□ 2.9
DDR1-279ENST00000515529 NEXNQ0ZGT2 675 aa33.16■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms