RNA–Protein interactions for RNA: ENST00000514773.1

PCDH1-207, Transcript of protocadherin 1, humanhuman

TSL 4

Gene PCDH1, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-207ENST00000514773 STK31Q9BXU1 1019 aa23.12■■□□□ 1.29
PCDH1-207ENST00000514773 MAP3K15Q6ZN16 1313 aa23.11■■□□□ 1.29
PCDH1-207ENST00000514773 TSPYL6Q8N831 410 aa23.11■■□□□ 1.29
PCDH1-207ENST00000514773 SPINK5Q9NQ38 1064 aaPredicted RBP23.11■■□□□ 1.29
PCDH1-207ENST00000514773 POLRMTO00411 1230 aaKnown RBP23.1■■□□□ 1.29
PCDH1-207ENST00000514773 EXOSC9Q06265 439 aaKnown RBP23.1■■□□□ 1.29
PCDH1-207ENST00000514773 PROSER3Q2NL68 480 aa23.1■■□□□ 1.29
PCDH1-207ENST00000514773 BICDL1Q6ZP65 573 aa23.1■■□□□ 1.29
PCDH1-207ENST00000514773 LRP10Q7Z4F1 713 aa23.1■■□□□ 1.29
PCDH1-207ENST00000514773 CARMIL3Q8ND23 1372 aa23.1■■□□□ 1.29
PCDH1-207ENST00000514773 ANXA1P04083 346 aa23.09■■□□□ 1.29
PCDH1-207ENST00000514773 TBC1D9BQ66K14 1250 aa23.09■■□□□ 1.29
PCDH1-207ENST00000514773 TTLL7Q6ZT98 887 aa23.09■■□□□ 1.29
PCDH1-207ENST00000514773 COPS6Q7L5N1 327 aa23.09■■□□□ 1.29
PCDH1-207ENST00000514773 BCORQ6W2J9 1755 aa23.09■■□□□ 1.29
PCDH1-207ENST00000514773 DCAF8L1A6NGE4 600 aa23.08■■□□□ 1.29
PCDH1-207ENST00000514773 HNRNPUQ00839 825 aaKnown RBP eCLIP23.08■■□□□ 1.29
PCDH1-207ENST00000514773 DDR1Q08345 913 aa23.08■■□□□ 1.29
PCDH1-207ENST00000514773 AIMP1Q12904 312 aaKnown RBP23.08■■□□□ 1.29
PCDH1-207ENST00000514773 XAGE3Q8WTP9 111 aa23.08■■□□□ 1.29
PCDH1-207ENST00000514773 SERPINB2P05120 415 aa23.07■■□□□ 1.28
PCDH1-207ENST00000514773 SLFN5Q08AF3 891 aa23.07■■□□□ 1.28
PCDH1-207ENST00000514773 ZBTB3Q9H5J0 574 aa23.07■■□□□ 1.28
PCDH1-207ENST00000514773 NPHP1O15259 732 aa23.06■■□□□ 1.28
PCDH1-207ENST00000514773 HSP90AB3PQ58FF7 597 aa23.06■■□□□ 1.28
PCDH1-207ENST00000514773 GIGYF2Q6Y7W6 1299 aaKnown RBP23.06■■□□□ 1.28
PCDH1-207ENST00000514773 NIP7Q9Y221 180 aaKnown RBP eCLIP23.06■■□□□ 1.28
PCDH1-207ENST00000514773 VAMP4O75379 141 aa23.05■■□□□ 1.28
PCDH1-207ENST00000514773 HLFQ16534 295 aa23.05■■□□□ 1.28
PCDH1-207ENST00000514773 ANKRD13DQ6ZTN6 518 aa23.05■■□□□ 1.28
PCDH1-207ENST00000514773 DDX58O95786 925 aaKnown RBP23.04■■□□□ 1.28
PCDH1-207ENST00000514773 TGFB2P61812 414 aa23.04■■□□□ 1.28
PCDH1-207ENST00000514773 PLBD2Q8NHP8 589 aa23.04■■□□□ 1.28
PCDH1-207ENST00000514773 C10orf71Q711Q0 1435 aa23.03■■□□□ 1.28
PCDH1-207ENST00000514773 ATP10DQ9P241 1426 aa23.03■■□□□ 1.28
PCDH1-207ENST00000514773 TPTE2Q6XPS3 522 aa23.03■■□□□ 1.28
PCDH1-207ENST00000514773 NBPF5PQ86XG9 351 aaPredicted RBP23.03■■□□□ 1.28
PCDH1-207ENST00000514773 SLC4A2P04920 1241 aa23.02■■□□□ 1.28
PCDH1-207ENST00000514773 CNBD1Q8NA66 436 aa23.02■■□□□ 1.28
PCDH1-207ENST00000514773 NYXQ9GZU5 481 aa23.02■■□□□ 1.28
PCDH1-207ENST00000514773 ST5P78524 1137 aa23.01■■□□□ 1.27
PCDH1-207ENST00000514773 PARP10Q53GL7 1025 aa23.01■■□□□ 1.27
PCDH1-207ENST00000514773 ZNF428Q96B54 188 aa23.01■■□□□ 1.27
PCDH1-207ENST00000514773 CDCA7LQ96GN5 454 aa23.01■■□□□ 1.27
PCDH1-207ENST00000514773 NUP98P52948 1817 aa23.01■■□□□ 1.27
PCDH1-207ENST00000514773 GTF2E1P29083 439 aaPredicted RBP23■■□□□ 1.27
PCDH1-207ENST00000514773 RIC3Q7Z5B4 369 aa23■■□□□ 1.27
PCDH1-207ENST00000514773 TRMT2AQ8IZ69 625 aaKnown RBP23■■□□□ 1.27
PCDH1-207ENST00000514773 NLGN2Q8NFZ4 835 aa23■■□□□ 1.27
PCDH1-207ENST00000514773 CT47B1P0C2W7 299 aaPredicted RBP22.99■■□□□ 1.27
PCDH1-207ENST00000514773 PPP1R42Q7Z4L9 355 aa22.99■■□□□ 1.27
PCDH1-207ENST00000514773 ZNF34Q8IZ26 560 aa22.99■■□□□ 1.27
PCDH1-207ENST00000514773 PHAXQ9H814 394 aaKnown RBP22.99■■□□□ 1.27
PCDH1-207ENST00000514773 PDZRN3Q9UPQ7 1066 aa22.99■■□□□ 1.27
PCDH1-207ENST00000514773 NRXN2Q9P2S2 1712 aa22.99■■□□□ 1.27
PCDH1-207ENST00000514773 KIF13BQ9NQT8 1826 aa22.98■■□□□ 1.27
PCDH1-207ENST00000514773 CACNA1FO60840 1977 aa22.98■■□□□ 1.27
PCDH1-207ENST00000514773 TCIRG1Q13488 830 aa22.98■■□□□ 1.27
PCDH1-207ENST00000514773 PRR5LQ6MZQ0 368 aa22.98■■□□□ 1.27
PCDH1-207ENST00000514773 BRIP1Q9BX63 1249 aa22.98■■□□□ 1.27
PCDH1-207ENST00000514773 ZBED9Q6R2W3 1325 aa22.98■■□□□ 1.27
PCDH1-207ENST00000514773 AFDNP55196 1824 aaKnown RBP22.98■■□□□ 1.27
PCDH1-207ENST00000514773 TCERG1O14776 1098 aaKnown RBP22.97■■□□□ 1.27
PCDH1-207ENST00000514773 GPTP24298 496 aa22.97■■□□□ 1.27
PCDH1-207ENST00000514773 PDE6BP35913 854 aa22.97■■□□□ 1.27
PCDH1-207ENST00000514773 IBTKQ9P2D0 1353 aaPredicted RBP22.96■■□□□ 1.27
PCDH1-207ENST00000514773 RNF123Q5XPI4 1314 aa22.95■■□□□ 1.26
PCDH1-207ENST00000514773 KSR2Q6VAB6 950 aa22.95■■□□□ 1.26
PCDH1-207ENST00000514773 GOLGB1Q14789 3259 aaKnown RBP22.95■■□□□ 1.26
PCDH1-207ENST00000514773 FAM177BA6PVY3 158 aa22.94■■□□□ 1.26
PCDH1-207ENST00000514773 FLIIQ13045 1269 aa22.94■■□□□ 1.26
PCDH1-207ENST00000514773 GPR162Q16538 588 aa22.94■■□□□ 1.26
PCDH1-207ENST00000514773 UTP14AQ9BVJ6 771 aaKnown RBP22.94■■□□□ 1.26
PCDH1-207ENST00000514773 PXDNLA1KZ92 1463 aa22.93■■□□□ 1.26
PCDH1-207ENST00000514773 UBN2Q6ZU65 1347 aa22.93■■□□□ 1.26
PCDH1-207ENST00000514773 A0A0G2JLW4 131 aa22.93■■□□□ 1.26
PCDH1-207ENST00000514773 H0YIN7 160 aa22.93■■□□□ 1.26
PCDH1-207ENST00000514773 NEXNQ0ZGT2 675 aa22.93■■□□□ 1.26
PCDH1-207ENST00000514773 PI4KAP2A4QPH2 592 aa22.92■■□□□ 1.26
PCDH1-207ENST00000514773 DPEP1P16444 411 aa22.92■■□□□ 1.26
PCDH1-207ENST00000514773 TRIM28Q13263 835 aaKnown RBP22.92■■□□□ 1.26
PCDH1-207ENST00000514773 FKBP5Q13451 457 aaPredicted RBP22.92■■□□□ 1.26
PCDH1-207ENST00000514773 SUSD4Q5VX71 490 aa22.92■■□□□ 1.26
PCDH1-207ENST00000514773 PI4KAP1Q8N8J0 262 aa22.92■■□□□ 1.26
PCDH1-207ENST00000514773 PIM2Q9P1W9 311 aa22.92■■□□□ 1.26
PCDH1-207ENST00000514773 ALDH1L2Q3SY69 923 aa22.91■■□□□ 1.26
PCDH1-207ENST00000514773 NLRP10Q86W26 655 aa22.91■■□□□ 1.26
PCDH1-207ENST00000514773 PELP1Q8IZL8 1130 aaKnown RBP22.91■■□□□ 1.26
PCDH1-207ENST00000514773 METTL22Q9BUU2 404 aaPredicted RBP22.91■■□□□ 1.26
PCDH1-207ENST00000514773 MAP3K2Q9Y2U5 619 aa22.91■■□□□ 1.26
PCDH1-207ENST00000514773 GRIN3BO60391 1043 aa22.9■■□□□ 1.26
PCDH1-207ENST00000514773 C2CD5Q86YS7 1000 aa22.9■■□□□ 1.26
PCDH1-207ENST00000514773 ISCA1Q9BUE6 129 aa22.9■■□□□ 1.26
PCDH1-207ENST00000514773 ANKRD36CQ5JPF3 1778 aa22.9■■□□□ 1.26
PCDH1-207ENST00000514773 NTSR2O95665 410 aa22.89■■□□□ 1.25
PCDH1-207ENST00000514773 G2E3Q7L622 706 aa22.89■■□□□ 1.25
PCDH1-207ENST00000514773 MYD88Q99836 296 aa22.89■■□□□ 1.25
PCDH1-207ENST00000514773 TRMT112Q9UI30 125 aaKnown RBP22.89■■□□□ 1.25
PCDH1-207ENST00000514773 ARFGEF2Q9Y6D5 1785 aa22.89■■□□□ 1.25
PCDH1-207ENST00000514773 CCDC24Q8N4L8 307 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms