RNA–Protein interactions for RNA: ENST00000514520.5

CNGA1-208, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

TSL 2

Gene CNGA1, Length 405 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-208ENST00000514520 FIGNL1Q6PIW4 674 aa7.59□□□□□ -1.19
CNGA1-208ENST00000514520 L3MBTL2Q969R5 705 aa7.59□□□□□ -1.19
CNGA1-208ENST00000514520 RRAGCQ9HB90 399 aa7.59□□□□□ -1.19
CNGA1-208ENST00000514520 PCBP4P57723 403 aaKnown RBP7.58□□□□□ -1.2
CNGA1-208ENST00000514520 PSME1Q06323 249 aa7.58□□□□□ -1.2
CNGA1-208ENST00000514520 TEAD4Q15561 434 aa7.58□□□□□ -1.2
CNGA1-208ENST00000514520 NBPF1Q3BBV0 1214 aa7.58□□□□□ -1.2
CNGA1-208ENST00000514520 FAM182BQ5T319 152 aa7.58□□□□□ -1.2
CNGA1-208ENST00000514520 ALYREFQ86V81 257 aaKnown RBP7.58□□□□□ -1.2
CNGA1-208ENST00000514520 PLEKHM2Q8IWE5 1019 aa7.58□□□□□ -1.2
CNGA1-208ENST00000514520 TPCN2Q8NHX9 752 aa7.58□□□□□ -1.2
CNGA1-208ENST00000514520 MKL2Q9ULH7 1088 aa7.58□□□□□ -1.2
CNGA1-208ENST00000514520 NOS2P35228 1153 aa7.57□□□□□ -1.2
CNGA1-208ENST00000514520 SAMD5Q5TGI4 173 aa7.57□□□□□ -1.2
CNGA1-208ENST00000514520 HDGFL1Q5TGJ6 251 aa7.57□□□□□ -1.2
CNGA1-208ENST00000514520 POTEAQ6S8J7 498 aa7.57□□□□□ -1.2
CNGA1-208ENST00000514520 LRRC69Q6ZNQ3 347 aa7.57□□□□□ -1.2
CNGA1-208ENST00000514520 FNBP4Q8N3X1 1017 aaPredicted RBP7.57□□□□□ -1.2
CNGA1-208ENST00000514520 CLUAP1Q96AJ1 413 aa7.57□□□□□ -1.2
CNGA1-208ENST00000514520 TSPAN10Q9H1Z9 355 aaPredicted RBP7.57□□□□□ -1.2
CNGA1-208ENST00000514520 C21orf2O43822 256 aa7.56□□□□□ -1.2
CNGA1-208ENST00000514520 UBTFP17480 764 aaKnown RBP7.56□□□□□ -1.2
CNGA1-208ENST00000514520 TATP17735 454 aaPredicted RBP7.56□□□□□ -1.2
CNGA1-208ENST00000514520 CHSY3Q70JA7 882 aa7.56□□□□□ -1.2
CNGA1-208ENST00000514520 TRIM11Q96F44 468 aa7.56□□□□□ -1.2
CNGA1-208ENST00000514520 PIK3R2O00459 728 aa7.55□□□□□ -1.2
CNGA1-208ENST00000514520 LZTS3O60299 673 aaPredicted RBP7.55□□□□□ -1.2
CNGA1-208ENST00000514520 AMPD1P23109 780 aa7.55□□□□□ -1.2
CNGA1-208ENST00000514520 ZNF468Q5VIY5 522 aaPredicted RBP7.55□□□□□ -1.2
CNGA1-208ENST00000514520 HSH2DQ96JZ2 352 aa7.55□□□□□ -1.2
CNGA1-208ENST00000514520 SLC30A3Q99726 388 aa7.55□□□□□ -1.2
CNGA1-208ENST00000514520 CADPSQ9ULU8 1353 aa7.55□□□□□ -1.2
CNGA1-208ENST00000514520 K7ELQ4 463 aaPredicted RBP7.54□□□□□ -1.2
CNGA1-208ENST00000514520 BACH1O14867 736 aa7.54□□□□□ -1.2
CNGA1-208ENST00000514520 ATP9BO43861 1147 aa7.54□□□□□ -1.2
CNGA1-208ENST00000514520 ADH6P28332 368 aa7.54□□□□□ -1.2
CNGA1-208ENST00000514520 CHRNA4P43681 627 aa7.54□□□□□ -1.2
CNGA1-208ENST00000514520 SFSWAPQ12872 951 aaKnown RBP7.54□□□□□ -1.2
CNGA1-208ENST00000514520 CCDC102BQ68D86 513 aa7.54□□□□□ -1.2
CNGA1-208ENST00000514520 TSEN2Q8NCE0 465 aaKnown RBP7.54□□□□□ -1.2
CNGA1-208ENST00000514520 SFI1A8K8P3 1242 aa7.53□□□□□ -1.2
CNGA1-208ENST00000514520 OGFOD1Q8N543 542 aa7.53□□□□□ -1.2
CNGA1-208ENST00000514520 ZNF280CQ8ND82 737 aa7.53□□□□□ -1.2
CNGA1-208ENST00000514520 GAS2L2Q8NHY3 880 aa7.53□□□□□ -1.2
CNGA1-208ENST00000514520 ZNF594Q96JF6 807 aaPredicted RBP7.53□□□□□ -1.2
CNGA1-208ENST00000514520 CEP164Q9UPV0 1460 aa7.52□□□□□ -1.21
CNGA1-208ENST00000514520 GNB5O14775 395 aa7.52□□□□□ -1.21
CNGA1-208ENST00000514520 ITGB7P26010 798 aa7.52□□□□□ -1.21
CNGA1-208ENST00000514520 BAG6P46379 1132 aa7.52□□□□□ -1.21
CNGA1-208ENST00000514520 FLIIQ13045 1269 aa7.52□□□□□ -1.21
CNGA1-208ENST00000514520 COL9A3Q14050 684 aaPredicted RBP7.52□□□□□ -1.21
CNGA1-208ENST00000514520 BICDL1Q6ZP65 573 aa7.52□□□□□ -1.21
CNGA1-208ENST00000514520 RAB44Q7Z6P3 723 aaPredicted RBP7.52□□□□□ -1.21
CNGA1-208ENST00000514520 CD163Q86VB7 1156 aa7.52□□□□□ -1.21
CNGA1-208ENST00000514520 SIX5Q8N196 739 aa7.52□□□□□ -1.21
CNGA1-208ENST00000514520 AVENQ9NQS1 362 aaPredicted RBP7.52□□□□□ -1.21
CNGA1-208ENST00000514520 MARK1Q9P0L2 795 aa7.52□□□□□ -1.21
CNGA1-208ENST00000514520 MKRN1Q9UHC7 482 aaKnown RBP7.52□□□□□ -1.21
CNGA1-208ENST00000514520 STARD13Q9Y3M8 1113 aa7.52□□□□□ -1.21
CNGA1-208ENST00000514520 SERTM1A2A2V5 107 aa7.51□□□□□ -1.21
CNGA1-208ENST00000514520 C1QTNF9BB2RNN3 333 aa7.51□□□□□ -1.21
CNGA1-208ENST00000514520 LGR5O75473 907 aa7.51□□□□□ -1.21
CNGA1-208ENST00000514520 XP32Q5T750 250 aa7.51□□□□□ -1.21
CNGA1-208ENST00000514520 SYT9Q86SS6 491 aa7.51□□□□□ -1.21
CNGA1-208ENST00000514520 GLMNQ92990 594 aa7.51□□□□□ -1.21
CNGA1-208ENST00000514520 ZNF232Q9UNY5 417 aa7.51□□□□□ -1.21
CNGA1-208ENST00000514520 HCN4Q9Y3Q4 1203 aa7.51□□□□□ -1.21
CNGA1-208ENST00000514520 RIMBP3CA6NJZ7 1639 aa7.51□□□□□ -1.21
CNGA1-208ENST00000514520 RIMBP3BA6NNM3 1639 aa7.51□□□□□ -1.21
CNGA1-208ENST00000514520 RIMBP3Q9UFD9 1639 aa7.51□□□□□ -1.21
CNGA1-208ENST00000514520 MROH2BQ7Z745 1585 aa7.5□□□□□ -1.21
CNGA1-208ENST00000514520 RAD21O60216 631 aa7.5□□□□□ -1.21
CNGA1-208ENST00000514520 HIRAP54198 1017 aaPredicted RBP7.5□□□□□ -1.21
CNGA1-208ENST00000514520 TRIM50Q86XT4 487 aa7.5□□□□□ -1.21
CNGA1-208ENST00000514520 PHACTR1Q9C0D0 580 aa7.5□□□□□ -1.21
CNGA1-208ENST00000514520 MAFBQ9Y5Q3 323 aaPredicted RBP7.5□□□□□ -1.21
CNGA1-208ENST00000514520 PSMA6P60900 246 aaKnown RBP7.49□□□□□ -1.21
CNGA1-208ENST00000514520 LAMC2Q13753 1193 aa7.49□□□□□ -1.21
CNGA1-208ENST00000514520 C8orf86Q6ZUL3 223 aa7.49□□□□□ -1.21
CNGA1-208ENST00000514520 RHPN1Q8TCX5 695 aa7.49□□□□□ -1.21
CNGA1-208ENST00000514520 GJA3Q9Y6H8 435 aa7.49□□□□□ -1.21
CNGA1-208ENST00000514520 FURINP09958 794 aa7.48□□□□□ -1.21
CNGA1-208ENST00000514520 TYRO3Q06418 890 aa7.48□□□□□ -1.21
CNGA1-208ENST00000514520 CRTC2Q53ET0 693 aaPredicted RBP7.48□□□□□ -1.21
CNGA1-208ENST00000514520 PROSER2Q86WR7 435 aaPredicted RBP7.48□□□□□ -1.21
CNGA1-208ENST00000514520 LARGE2Q8N3Y3 721 aa7.48□□□□□ -1.21
CNGA1-208ENST00000514520 TFIP11Q9UBB9 837 aaKnown RBP7.48□□□□□ -1.21
CNGA1-208ENST00000514520 ELOA3CA0A087WX78 387 aaPredicted RBP7.47□□□□□ -1.21
CNGA1-208ENST00000514520 ELOA3DA6NLF2 546 aaPredicted RBP7.47□□□□□ -1.21
CNGA1-208ENST00000514520 M0R2N6 131 aa7.47□□□□□ -1.21
CNGA1-208ENST00000514520 GRNP28799 593 aaKnown RBP7.47□□□□□ -1.21
CNGA1-208ENST00000514520 ELOA3BQ3SY89 546 aa7.47□□□□□ -1.21
CNGA1-208ENST00000514520 WWC1Q8IX03 1113 aa7.47□□□□□ -1.21
CNGA1-208ENST00000514520 ELOA3Q8NG57 546 aa7.47□□□□□ -1.21
CNGA1-208ENST00000514520 SUSD3Q96L08 255 aa7.47□□□□□ -1.21
CNGA1-208ENST00000514520 PRR12Q9ULL5 1215 aa7.47□□□□□ -1.21
CNGA1-208ENST00000514520 FANCD2Q9BXW9 1451 aa7.47□□□□□ -1.21
CNGA1-208ENST00000514520 ARHGEF11O15085 1522 aa7.47□□□□□ -1.21
CNGA1-208ENST00000514520 PALM3A6NDB9 673 aaPredicted RBP7.46□□□□□ -1.22
CNGA1-208ENST00000514520 ALBP02768 609 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms