RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-223	ENST00000514267	CCDC97	Q96F63	343 aa	Predicted RBP	6.28	□□□□□ -1.4
CALCOCO2-223	ENST00000514267	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	6.28	□□□□□ -1.4
CALCOCO2-223	ENST00000514267	SERPINA10	Q9UK55	444 aa		6.28	□□□□□ -1.4
CALCOCO2-223	ENST00000514267	FOXO3	O43524	673 aa		6.27	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	BNIP3L	O60238	219 aa		6.27	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	THBS1	P07996	1170 aa		6.27	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	ELOA	Q14241	798 aa	Known RBP	6.27	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	SWI5	Q1ZZU3	235 aa		6.27	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	LYPD4	Q6UWN0	246 aa		6.27	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	ZDHHC1	Q8WTX9	485 aa		6.27	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	KLRG1	Q96E93	195 aa		6.27	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	ABHD17A	Q96GS6	310 aa		6.27	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	MARK1	Q9P0L2	795 aa		6.27	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	ZNF777	Q9ULD5	760 aa	Predicted RBP	6.27	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	SFI1	A8K8P3	1242 aa		6.26	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	KHNYN	O15037	678 aa	Known RBP	6.26	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	DKK1	O94907	266 aa		6.26	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	MAPT	P10636	758 aa	Known RBP	6.26	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	RFX1	P22670	979 aa		6.26	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	TNP2	Q05952	138 aa		6.26	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	DPYD	Q12882	1025 aa		6.26	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	CFAP70	Q5T0N1	1121 aa		6.26	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	TSEN2	Q8NCE0	465 aa	Known RBP	6.26	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	FAM200A	Q8TCP9	573 aa		6.26	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	VTI1A	Q96AJ9	217 aa		6.26	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	ACD	Q96AP0	544 aa		6.26	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	HINFP	Q9BQA5	517 aa		6.26	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	USP3	Q9Y6I4	520 aa		6.26	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	EPB42	P16452	691 aa		6.25	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	TXLNA	P40222	546 aa		6.25	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	RTN1	Q16799	776 aa		6.25	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	CRTC2	Q53ET0	693 aa	Predicted RBP	6.25	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	IER5	Q5VY09	327 aa		6.25	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	ARID3A	Q99856	593 aa		6.25	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	C2orf49	Q9BVC5	232 aa	Predicted RBP	6.25	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	PHACTR1	Q9C0D0	580 aa		6.25	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	MKL2	Q9ULH7	1088 aa		6.25	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	PRR12	Q9ULL5	1215 aa		6.25	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	ATAD2	Q6PL18	1390 aa		6.25	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	DCDC2B	A2VCK2	349 aa		6.24	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	ARID3C	A6NKF2	412 aa		6.24	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	EFS	O43281	561 aa		6.24	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	ZNF468	Q5VIY5	522 aa	Predicted RBP	6.24	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	TMEM151A	Q8N4L1	468 aa		6.24	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	WHAMM	Q8TF30	809 aa		6.24	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	EDARADD	Q8WWZ3	215 aa		6.24	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	SCG3	Q8WXD2	468 aa	Known RBP	6.24	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	C11orf16	Q9NQ32	467 aa		6.24	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	PARP3	Q9Y6F1	533 aa		6.24	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	AMPD1	P23109	780 aa		6.23	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	KCNQ4	P56696	695 aa		6.23	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	TBCEL	Q5QJ74	424 aa		6.23	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	ALDH16A1	Q8IZ83	802 aa		6.23	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	GALNT6	Q8NCL4	622 aa		6.23	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	6.23	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	ACIN1	Q9UKV3	1341 aa	Known RBP	6.23	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	SIN3B	O75182	1162 aa		6.22	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	IGHA1	P01876	353 aa		6.22	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	EPX	P11678	715 aa		6.22	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	ALAS2	P22557	587 aa		6.22	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	RASSF7	Q02833	373 aa		6.22	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	LRRC69	Q6ZNQ3	347 aa		6.22	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	CCDC82	Q8N4S0	544 aa		6.22	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	PODXL2	Q9NZ53	605 aa		6.22	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	NOP53	Q9NZM5	478 aa	Known RBP	6.22	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	GGA1	Q9UJY5	639 aa		6.22	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	NOVA2	Q9UNW9	492 aa	Known RBP	6.22	□□□□□ -1.41
CALCOCO2-223	ENST00000514267	SPDYE3	A6NKU9	549 aa		6.21	□□□□□ -1.42
CALCOCO2-223	ENST00000514267	TGFBR3L	H3BV60	316 aa		6.21	□□□□□ -1.42
CALCOCO2-223	ENST00000514267	ATG7	O95352	703 aa		6.21	□□□□□ -1.42
CALCOCO2-223	ENST00000514267	GDF11	O95390	407 aa		6.21	□□□□□ -1.42
CALCOCO2-223	ENST00000514267	CD33	P20138	364 aa		6.21	□□□□□ -1.42
CALCOCO2-223	ENST00000514267	WEE1	P30291	646 aa		6.21	□□□□□ -1.42
CALCOCO2-223	ENST00000514267	CTBS	Q01459	385 aa		6.21	□□□□□ -1.42
CALCOCO2-223	ENST00000514267	CHMP7	Q8WUX9	453 aa	Predicted RBP	6.21	□□□□□ -1.42
CALCOCO2-223	ENST00000514267	PBXIP1	Q96AQ6	731 aa		6.21	□□□□□ -1.42
CALCOCO2-223	ENST00000514267	SUSD3	Q96L08	255 aa		6.21	□□□□□ -1.42
CALCOCO2-223	ENST00000514267	CEP63	Q96MT8	703 aa		6.21	□□□□□ -1.42
CALCOCO2-223	ENST00000514267	BRD7	Q9NPI1	651 aa		6.21	□□□□□ -1.42
CALCOCO2-223	ENST00000514267	C21orf2	O43822	256 aa		6.2	□□□□□ -1.42
CALCOCO2-223	ENST00000514267	PCSK7	Q16549	785 aa		6.2	□□□□□ -1.42
CALCOCO2-223	ENST00000514267	COL26A1	Q96A83	441 aa		6.2	□□□□□ -1.42
CALCOCO2-223	ENST00000514267	KCNH4	Q9UQ05	1017 aa		6.2	□□□□□ -1.42
CALCOCO2-223	ENST00000514267	HCN4	Q9Y3Q4	1203 aa		6.2	□□□□□ -1.42
CALCOCO2-223	ENST00000514267	GNB5	O14775	395 aa		6.19	□□□□□ -1.42
CALCOCO2-223	ENST00000514267	PTCD1	O75127	700 aa	Known RBP	6.19	□□□□□ -1.42
CALCOCO2-223	ENST00000514267	PPP1R15A	O75807	674 aa	Predicted RBP	6.19	□□□□□ -1.42
CALCOCO2-223	ENST00000514267	ARID4A	P29374	1257 aa	Predicted RBP	6.19	□□□□□ -1.42
CALCOCO2-223	ENST00000514267	IRS1	P35568	1242 aa		6.19	□□□□□ -1.42
CALCOCO2-223	ENST00000514267	TYRO3	Q06418	890 aa		6.19	□□□□□ -1.42
CALCOCO2-223	ENST00000514267	C7orf43	Q8WVR3	580 aa		6.19	□□□□□ -1.42
CALCOCO2-223	ENST00000514267	MYO19	Q96H55	970 aa		6.19	□□□□□ -1.42
CALCOCO2-223	ENST00000514267	RRAGC	Q9HB90	399 aa		6.19	□□□□□ -1.42
CALCOCO2-223	ENST00000514267	ELOA3C	A0A087WX78	387 aa	Predicted RBP	6.18	□□□□□ -1.42
CALCOCO2-223	ENST00000514267	ELOA3D	A6NLF2	546 aa	Predicted RBP	6.18	□□□□□ -1.42
CALCOCO2-223	ENST00000514267	NEURL1B	A8MQ27	555 aa		6.18	□□□□□ -1.42
CALCOCO2-223	ENST00000514267	ADARB2-AS1	A8MUL3	147 aa		6.18	□□□□□ -1.42
CALCOCO2-223	ENST00000514267	C2CD2L	O14523	706 aa		6.18	□□□□□ -1.42
CALCOCO2-223	ENST00000514267	PDIA4	P13667	645 aa	Known RBP	6.18	□□□□□ -1.42
CALCOCO2-223	ENST00000514267	SPEM2	Q0P670	501 aa		6.18	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms