RNA–Protein interactions for RNA: ENST00000514055.5

CAST-240, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-240ENST00000514055 AMOTQ4VCS5 1084 aa11.69□□□□□ -0.54
CAST-240ENST00000514055 BRIP1Q9BX63 1249 aa11.69□□□□□ -0.54
CAST-240ENST00000514055 LGR6Q9HBX8 967 aa11.69□□□□□ -0.54
CAST-240ENST00000514055 TNRC18O15417 2968 aaPredicted RBP11.68□□□□□ -0.54
CAST-240ENST00000514055 RNF123Q5XPI4 1314 aa11.68□□□□□ -0.54
CAST-240ENST00000514055 EPHX2P34913 555 aa11.68□□□□□ -0.54
CAST-240ENST00000514055 CYP4F22Q6NT55 531 aa11.68□□□□□ -0.54
CAST-240ENST00000514055 PRPF40BQ6NWY9 871 aaKnown RBP11.68□□□□□ -0.54
CAST-240ENST00000514055 OLFM4Q6UX06 510 aa11.68□□□□□ -0.54
CAST-240ENST00000514055 PAXIP1Q6ZW49 1069 aaPredicted RBP11.68□□□□□ -0.54
CAST-240ENST00000514055 MCOLN1Q9GZU1 580 aa11.68□□□□□ -0.54
CAST-240ENST00000514055 HACL1Q9UJ83 578 aa11.68□□□□□ -0.54
CAST-240ENST00000514055 ADAMTSL1Q8N6G6 1762 aa11.68□□□□□ -0.54
CAST-240ENST00000514055 SCN4AP35499 1836 aa11.67□□□□□ -0.54
CAST-240ENST00000514055 PDE6BP35913 854 aa11.67□□□□□ -0.54
CAST-240ENST00000514055 CAPNS2Q96L46 248 aa11.67□□□□□ -0.54
CAST-240ENST00000514055 ZNF277Q9NRM2 450 aaPredicted RBP11.67□□□□□ -0.54
CAST-240ENST00000514055 COL3A1P02461 1466 aaPredicted RBP11.66□□□□□ -0.54
CAST-240ENST00000514055 AOC2O75106 756 aa11.66□□□□□ -0.54
CAST-240ENST00000514055 PPP2R1AP30153 589 aa11.66□□□□□ -0.54
CAST-240ENST00000514055 SLC52A2Q9HAB3 445 aa11.66□□□□□ -0.54
CAST-240ENST00000514055 DDX21Q9NR30 783 aaKnown RBP eCLIP11.66□□□□□ -0.54
CAST-240ENST00000514055 CACNA1SQ13698 1873 aa11.66□□□□□ -0.54
CAST-240ENST00000514055 EIF5P55010 431 aaKnown RBP11.65□□□□□ -0.54
CAST-240ENST00000514055 RALBP1Q15311 655 aa11.65□□□□□ -0.54
CAST-240ENST00000514055 SULT6B1Q6IMI4 303 aa11.65□□□□□ -0.54
CAST-240ENST00000514055 C7orf43Q8WVR3 580 aa11.65□□□□□ -0.54
CAST-240ENST00000514055 CNKSR1Q969H4 720 aa11.65□□□□□ -0.54
CAST-240ENST00000514055 GPR101Q96P66 508 aaPredicted RBP11.65□□□□□ -0.54
CAST-240ENST00000514055 TBC1D2BQ9UPU7 963 aa11.65□□□□□ -0.54
CAST-240ENST00000514055 THSD7BQ9C0I4 1608 aa11.64□□□□□ -0.55
CAST-240ENST00000514055 SRGNP10124 158 aa11.64□□□□□ -0.55
CAST-240ENST00000514055 STYK1Q6J9G0 422 aa11.64□□□□□ -0.55
CAST-240ENST00000514055 BEGAINQ9BUH8 593 aa11.64□□□□□ -0.55
CAST-240ENST00000514055 PDZRN3Q9UPQ7 1066 aa11.64□□□□□ -0.55
CAST-240ENST00000514055 ZNF330Q9Y3S2 320 aaPredicted RBP11.64□□□□□ -0.55
CAST-240ENST00000514055 CASP8AP2Q9UKL3 1982 aa11.64□□□□□ -0.55
CAST-240ENST00000514055 SCN11AQ9UI33 1791 aa11.64□□□□□ -0.55
CAST-240ENST00000514055 LTBP1Q14766 1721 aa11.63□□□□□ -0.55
CAST-240ENST00000514055 TRAF5O00463 557 aa11.63□□□□□ -0.55
CAST-240ENST00000514055 RNMTO43148 476 aaKnown RBP11.63□□□□□ -0.55
CAST-240ENST00000514055 CST9Q5W186 159 aa11.63□□□□□ -0.55
CAST-240ENST00000514055 MASTLQ96GX5 879 aa11.63□□□□□ -0.55
CAST-240ENST00000514055 CFAP53Q96M91 514 aa11.63□□□□□ -0.55
CAST-240ENST00000514055 DIAPH1O60610 1272 aaKnown RBP11.62□□□□□ -0.55
CAST-240ENST00000514055 IL13P35225 146 aa11.62□□□□□ -0.55
CAST-240ENST00000514055 FKBP4Q02790 459 aaKnown RBP eCLIP11.62□□□□□ -0.55
CAST-240ENST00000514055 DGKZQ13574 1117 aa11.62□□□□□ -0.55
CAST-240ENST00000514055 CCDC93Q567U6 631 aa11.62□□□□□ -0.55
CAST-240ENST00000514055 AKAP4Q5JQC9 854 aa11.62□□□□□ -0.55
CAST-240ENST00000514055 PNMA8AQ86V59 439 aaPredicted RBP11.62□□□□□ -0.55
CAST-240ENST00000514055 CNBD1Q8NA66 436 aa11.62□□□□□ -0.55
CAST-240ENST00000514055 A0A087WZG4 1122 aa11.61□□□□□ -0.55
CAST-240ENST00000514055 FZD9O00144 591 aa11.61□□□□□ -0.55
CAST-240ENST00000514055 ECE1P42892 770 aa11.61□□□□□ -0.55
CAST-240ENST00000514055 SOX10P56693 466 aa11.61□□□□□ -0.55
CAST-240ENST00000514055 SOGA3Q5TF21 947 aa11.61□□□□□ -0.55
CAST-240ENST00000514055 MRC1P22897 1456 aa11.61□□□□□ -0.55
CAST-240ENST00000514055 MYBBP1AQ9BQG0 1328 aaKnown RBP11.6□□□□□ -0.55
CAST-240ENST00000514055 NPHP1O15259 732 aa11.6□□□□□ -0.55
CAST-240ENST00000514055 CAMTA2O94983 1202 aa11.6□□□□□ -0.55
CAST-240ENST00000514055 EPS15P42566 896 aa11.6□□□□□ -0.55
CAST-240ENST00000514055 ST5P78524 1137 aa11.6□□□□□ -0.55
CAST-240ENST00000514055 VSIG10Q8N0Z9 540 aa11.6□□□□□ -0.55
CAST-240ENST00000514055 SETDB2Q96T68 719 aa11.6□□□□□ -0.55
CAST-240ENST00000514055 PRKRIP1Q9H875 184 aaPredicted RBP11.6□□□□□ -0.55
CAST-240ENST00000514055 GJA3Q9Y6H8 435 aa11.6□□□□□ -0.55
CAST-240ENST00000514055 TLL2Q9Y6L7 1015 aa11.6□□□□□ -0.55
CAST-240ENST00000514055 ARFGEF2Q9Y6D5 1785 aa11.59□□□□□ -0.55
CAST-240ENST00000514055 COL4A5P29400 1685 aa11.59□□□□□ -0.55
CAST-240ENST00000514055 SCN7AQ01118 1682 aa11.59□□□□□ -0.55
CAST-240ENST00000514055 A1BGP04217 495 aa11.59□□□□□ -0.55
CAST-240ENST00000514055 IARSP41252 1262 aaKnown RBP11.59□□□□□ -0.55
CAST-240ENST00000514055 SLC51AQ86UW1 340 aa11.59□□□□□ -0.55
CAST-240ENST00000514055 SYNE4Q8N205 404 aa11.59□□□□□ -0.55
CAST-240ENST00000514055 ZIC5Q96T25 663 aa11.59□□□□□ -0.55
CAST-240ENST00000514055 U2SURPO15042 1029 aaKnown RBP11.58□□□□□ -0.56
CAST-240ENST00000514055 STARD3NLO95772 234 aa11.58□□□□□ -0.56
CAST-240ENST00000514055 PIP4K2AP48426 406 aaPredicted RBP11.58□□□□□ -0.56
CAST-240ENST00000514055 GPC2Q8N158 579 aa11.58□□□□□ -0.56
CAST-240ENST00000514055 ZNF496Q96IT1 587 aaPredicted RBP11.58□□□□□ -0.56
CAST-240ENST00000514055 NUDCQ9Y266 331 aa11.58□□□□□ -0.56
CAST-240ENST00000514055 HMOX1P09601 288 aa11.57□□□□□ -0.56
CAST-240ENST00000514055 NPR1P16066 1061 aa11.57□□□□□ -0.56
CAST-240ENST00000514055 MAP2K2P36507 400 aa11.57□□□□□ -0.56
CAST-240ENST00000514055 SCNN1DP51172 638 aa11.57□□□□□ -0.56
CAST-240ENST00000514055 MTHFSDQ2M296 383 aaKnown RBP11.57□□□□□ -0.56
CAST-240ENST00000514055 CIAPIN1Q6FI81 312 aa11.57□□□□□ -0.56
CAST-240ENST00000514055 ANP32CO43423 234 aa11.56□□□□□ -0.56
CAST-240ENST00000514055 IL6STP40189 918 aaPredicted RBP11.56□□□□□ -0.56
CAST-240ENST00000514055 SAPCD2Q86UD0 394 aa11.56□□□□□ -0.56
CAST-240ENST00000514055 NBPF5PQ86XG9 351 aaPredicted RBP11.56□□□□□ -0.56
CAST-240ENST00000514055 UBR2Q8IWV8 1755 aa11.56□□□□□ -0.56
CAST-240ENST00000514055 SNED1Q8TER0 1413 aa11.55□□□□□ -0.56
CAST-240ENST00000514055 FAM177BA6PVY3 158 aa11.55□□□□□ -0.56
CAST-240ENST00000514055 CELF2O95319 508 aaKnown RBP11.55□□□□□ -0.56
CAST-240ENST00000514055 RTKN2Q8IZC4 609 aa11.55□□□□□ -0.56
CAST-240ENST00000514055 TTC5Q8N0Z6 440 aa11.55□□□□□ -0.56
CAST-240ENST00000514055 HEG1Q9ULI3 1381 aa11.54□□□□□ -0.56
CAST-240ENST00000514055 KLRG2A4D1S0 409 aaPredicted RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms