RNA–Protein interactions for RNA: ENST00000514027.5

SDHA-216, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,209 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-216ENST00000514027 ANAPC15P60006 121 aa15.19■□□□□ 0.02
SDHA-216ENST00000514027 CWF19L2Q2TBE0 894 aaKnown RBP15.19■□□□□ 0.02
SDHA-216ENST00000514027 PROSER2Q86WR7 435 aaPredicted RBP15.19■□□□□ 0.02
SDHA-216ENST00000514027 CNTROBQ8N137 903 aa15.19■□□□□ 0.02
SDHA-216ENST00000514027 ZDHHC9Q9Y397 364 aa15.19■□□□□ 0.02
SDHA-216ENST00000514027 PRPF40AO75400 957 aaKnown RBP15.19■□□□□ 0.02
SDHA-216ENST00000514027 AIMP1Q12904 312 aaKnown RBP15.19■□□□□ 0.02
SDHA-216ENST00000514027 HSP90AB4PQ58FF6 505 aa15.19■□□□□ 0.02
SDHA-216ENST00000514027 LMBRD1Q9NUN5 540 aa15.19■□□□□ 0.02
SDHA-216ENST00000514027 RGPD5Q99666 1765 aa15.18■□□□□ 0.02
SDHA-216ENST00000514027 ZSCAN30Q86W11 494 aa15.17■□□□□ 0.02
SDHA-216ENST00000514027 CWC27Q6UX04 472 aaKnown RBP15.17■□□□□ 0.02
SDHA-216ENST00000514027 PA2G4Q9UQ80 394 aaKnown RBP15.17■□□□□ 0.02
SDHA-216ENST00000514027 KSR2Q6VAB6 950 aa15.16■□□□□ 0.02
SDHA-216ENST00000514027 TRPM3Q9HCF6 1732 aaPredicted RBP15.16■□□□□ 0.02
SDHA-216ENST00000514027 HSPA4P34932 840 aa15.16■□□□□ 0.02
SDHA-216ENST00000514027 CLASRPQ8N2M8 674 aaKnown RBP15.16■□□□□ 0.02
SDHA-216ENST00000514027 NLRP2Q9NX02 1062 aa15.16■□□□□ 0.02
SDHA-216ENST00000514027 OVOS2A0A0G2JMS6 1433 aa15.16■□□□□ 0.02
SDHA-216ENST00000514027 SGSM2O43147 1006 aa15.15■□□□□ 0.02
SDHA-216ENST00000514027 ALDH1L1O75891 902 aa15.15■□□□□ 0.02
SDHA-216ENST00000514027 SLC39A6Q13433 755 aa15.15■□□□□ 0.02
SDHA-216ENST00000514027 ERBB3P21860 1342 aa15.15■□□□□ 0.02
SDHA-216ENST00000514027 RAD50Q92878 1312 aa15.15■□□□□ 0.02
SDHA-216ENST00000514027 ZSCAN20P17040 1043 aaPredicted RBP15.15■□□□□ 0.02
SDHA-216ENST00000514027 NASPP49321 788 aaPredicted RBP15.15■□□□□ 0.02
SDHA-216ENST00000514027 ZSCAN23Q3MJ62 389 aa15.15■□□□□ 0.02
SDHA-216ENST00000514027 PPP4R3BQ5MIZ7 849 aa15.15■□□□□ 0.02
SDHA-216ENST00000514027 RAPGEF4Q8WZA2 1011 aa15.15■□□□□ 0.02
SDHA-216ENST00000514027 HYPKQ9NX55 129 aa15.15■□□□□ 0.02
SDHA-216ENST00000514027 SPG7Q9UQ90 795 aa15.15■□□□□ 0.02
SDHA-216ENST00000514027 IFIT2P09913 472 aaKnown RBP15.14■□□□□ 0.01
SDHA-216ENST00000514027 CCDC173Q0VFZ6 552 aa15.14■□□□□ 0.01
SDHA-216ENST00000514027 CUL4AQ13619 759 aa15.14■□□□□ 0.01
SDHA-216ENST00000514027 FOXD4L6Q3SYB3 417 aaPredicted RBP15.14■□□□□ 0.01
SDHA-216ENST00000514027 FOXD4L3Q6VB84 417 aaPredicted RBP15.14■□□□□ 0.01
SDHA-216ENST00000514027 DIAPH3Q9NSV4 1193 aa15.14■□□□□ 0.01
SDHA-216ENST00000514027 RBM27Q9P2N5 1060 aaKnown RBP15.14■□□□□ 0.01
SDHA-216ENST00000514027 C1orf167Q5SNV9 1468 aa15.14■□□□□ 0.01
SDHA-216ENST00000514027 CAMTA1Q9Y6Y1 1673 aa15.14■□□□□ 0.01
SDHA-216ENST00000514027 GLRX3O76003 335 aaKnown RBP15.13■□□□□ 0.01
SDHA-216ENST00000514027 DDX58O95786 925 aaKnown RBP15.13■□□□□ 0.01
SDHA-216ENST00000514027 MYL6BP14649 208 aa15.13■□□□□ 0.01
SDHA-216ENST00000514027 GPT2Q8TD30 523 aa15.13■□□□□ 0.01
SDHA-216ENST00000514027 DDX17Q92841 729 aaKnown RBP15.13■□□□□ 0.01
SDHA-216ENST00000514027 ARID3AQ99856 593 aa15.13■□□□□ 0.01
SDHA-216ENST00000514027 TTC41PQ6P2S7 1318 aa15.13■□□□□ 0.01
SDHA-216ENST00000514027 UQCRHLA0A096LP55 91 aa15.13■□□□□ 0.01
SDHA-216ENST00000514027 UQCRHP07919 91 aa15.13■□□□□ 0.01
SDHA-216ENST00000514027 MTX1Q13505 466 aa15.13■□□□□ 0.01
SDHA-216ENST00000514027 GPATCH3Q96I76 525 aa15.13■□□□□ 0.01
SDHA-216ENST00000514027 SUCLG2Q96I99 432 aa15.13■□□□□ 0.01
SDHA-216ENST00000514027 R3HCC1Q9Y3T6 440 aaKnown RBP15.13■□□□□ 0.01
SDHA-216ENST00000514027 SIPA1L3O60292 1781 aaPredicted RBP15.13■□□□□ 0.01
SDHA-216ENST00000514027 KIF1AQ12756 1690 aa15.12■□□□□ 0.01
SDHA-216ENST00000514027 HEG1Q9ULI3 1381 aa15.12■□□□□ 0.01
SDHA-216ENST00000514027 MSNP26038 577 aaKnown RBP15.12■□□□□ 0.01
SDHA-216ENST00000514027 RIC3Q7Z5B4 369 aa15.12■□□□□ 0.01
SDHA-216ENST00000514027 AACSQ86V21 672 aa15.12■□□□□ 0.01
SDHA-216ENST00000514027 LSG1Q9H089 658 aaKnown RBP15.12■□□□□ 0.01
SDHA-216ENST00000514027 SNX14Q9Y5W7 946 aa15.12■□□□□ 0.01
SDHA-216ENST00000514027 GRM8O00222 908 aa15.12■□□□□ 0.01
SDHA-216ENST00000514027 BRD1O95696 1058 aa15.12■□□□□ 0.01
SDHA-216ENST00000514027 CSB-PGBD3P0DP91 1061 aa15.12■□□□□ 0.01
SDHA-216ENST00000514027 LINS1Q8NG48 757 aa15.12■□□□□ 0.01
SDHA-216ENST00000514027 ANP32BQ92688 251 aaKnown RBP15.12■□□□□ 0.01
SDHA-216ENST00000514027 INTS4Q96HW7 963 aaKnown RBP15.12■□□□□ 0.01
SDHA-216ENST00000514027 LARP6Q9BRS8 491 aaKnown RBP15.12■□□□□ 0.01
SDHA-216ENST00000514027 BICC1Q9H694 974 aaKnown RBP15.12■□□□□ 0.01
SDHA-216ENST00000514027 DDX21Q9NR30 783 aaKnown RBP eCLIP15.12■□□□□ 0.01
SDHA-216ENST00000514027 ECHDC1Q9NTX5 307 aa15.12■□□□□ 0.01
SDHA-216ENST00000514027 DYNC1I1O14576 645 aa15.11■□□□□ 0.01
SDHA-216ENST00000514027 ERC1Q8IUD2 1116 aa15.11■□□□□ 0.01
SDHA-216ENST00000514027 PPP1R9BQ96SB3 815 aa15.11■□□□□ 0.01
SDHA-216ENST00000514027 SIL1Q9H173 461 aa15.11■□□□□ 0.01
SDHA-216ENST00000514027 HDAC5Q9UQL6 1122 aa15.11■□□□□ 0.01
SDHA-216ENST00000514027 ZNF790Q6PG37 636 aa15.11■□□□□ 0.01
SDHA-216ENST00000514027 RASEFQ8IZ41 740 aa15.11■□□□□ 0.01
SDHA-216ENST00000514027 CCDC94Q9BW85 323 aaPredicted RBP15.11■□□□□ 0.01
SDHA-216ENST00000514027 TMEM51Q9NW97 253 aa15.11■□□□□ 0.01
SDHA-216ENST00000514027 USP42Q9H9J4 1324 aaKnown RBP15.1■□□□□ 0.01
SDHA-216ENST00000514027 EPB41L2O43491 1005 aaKnown RBP15.1■□□□□ 0.01
SDHA-216ENST00000514027 KIF20AO95235 890 aa15.1■□□□□ 0.01
SDHA-216ENST00000514027 TATP17735 454 aaPredicted RBP15.1■□□□□ 0.01
SDHA-216ENST00000514027 ZNF445P59923 1031 aa15.1■□□□□ 0.01
SDHA-216ENST00000514027 NFATC2IPQ8NCF5 419 aa15.1■□□□□ 0.01
SDHA-216ENST00000514027 C19orf44Q9H6X5 657 aa15.1■□□□□ 0.01
SDHA-216ENST00000514027 NPHP3Q7Z494 1330 aa15.1■□□□□ 0.01
SDHA-216ENST00000514027 C5P01031 1676 aa15.1■□□□□ 0.01
SDHA-216ENST00000514027 CRYBG1Q9Y4K1 1723 aa15.1■□□□□ 0.01
SDHA-216ENST00000514027 G3BP1Q13283 466 aaKnown RBP eCLIP15.09■□□□□ 0.019e-8■■□□□ 12.6
SDHA-216ENST00000514027 CABLES1Q8TDN4 633 aa15.09■□□□□ 0.01
SDHA-216ENST00000514027 RUFY2Q8WXA3 655 aa15.09■□□□□ 0.01
SDHA-216ENST00000514027 IL17RAQ96F46 866 aa15.09■□□□□ 0.01
SDHA-216ENST00000514027 SLC52A2Q9HAB3 445 aa15.09■□□□□ 0.01
SDHA-216ENST00000514027 NSFL1CQ9UNZ2 370 aaKnown RBP15.09■□□□□ 0.01
SDHA-216ENST00000514027 KDM6AO15550 1401 aaPredicted RBP15.09■□□□□ 0.01
SDHA-216ENST00000514027 CPA1P15085 419 aa15.09■□□□□ 0.01
SDHA-216ENST00000514027 ATF3P18847 181 aa15.09■□□□□ 0.01
SDHA-216ENST00000514027 CASTP20810 708 aaKnown RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms