RNA–Protein interactions for RNA: ENST00000514013.1

SH3D19-209, Transcript of SH3 domain containing 19, humanhuman

TSL 4

Gene SH3D19, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-209ENST00000514013 RC3H1Q5TC82 1133 aaKnown RBP12.72□□□□□ -0.37
SH3D19-209ENST00000514013 RFC4P35249 363 aa12.71□□□□□ -0.37
SH3D19-209ENST00000514013 COL5A3P25940 1745 aaPredicted RBP12.71□□□□□ -0.38
SH3D19-209ENST00000514013 POTECB2RU33 542 aa12.7□□□□□ -0.38
SH3D19-209ENST00000514013 RIMBP2O15034 1052 aa12.7□□□□□ -0.38
SH3D19-209ENST00000514013 IFNL2Q8IZJ0 200 aa12.7□□□□□ -0.38
SH3D19-209ENST00000514013 EFCAB3Q8N7B9 438 aa12.7□□□□□ -0.38
SH3D19-209ENST00000514013 CARD14Q9BXL6 1004 aa12.7□□□□□ -0.38
SH3D19-209ENST00000514013 USP42Q9H9J4 1324 aaKnown RBP12.69□□□□□ -0.38
SH3D19-209ENST00000514013 MYH14Q7Z406 1995 aaKnown RBP12.69□□□□□ -0.38
SH3D19-209ENST00000514013 PPM1GO15355 546 aaPredicted RBP12.69□□□□□ -0.38
SH3D19-209ENST00000514013 SBF1O95248 1867 aa12.68□□□□□ -0.38
SH3D19-209ENST00000514013 GLTPD2A6NH11 291 aa12.68□□□□□ -0.38
SH3D19-209ENST00000514013 POLRMTO00411 1230 aaKnown RBP12.68□□□□□ -0.38
SH3D19-209ENST00000514013 VEGFAP15692 232 aaPredicted RBP12.68□□□□□ -0.38
SH3D19-209ENST00000514013 ZNF831Q5JPB2 1677 aa12.67□□□□□ -0.38
SH3D19-209ENST00000514013 WASHC2AQ641Q2 1341 aa12.67□□□□□ -0.38
SH3D19-209ENST00000514013 FOXN1O15353 648 aa12.67□□□□□ -0.38
SH3D19-209ENST00000514013 CRKLP46109 303 aaKnown RBP12.67□□□□□ -0.38
SH3D19-209ENST00000514013 MKRN1Q9UHC7 482 aaKnown RBP12.67□□□□□ -0.38
SH3D19-209ENST00000514013 ANKRD26Q9UPS8 1709 aa12.67□□□□□ -0.38
SH3D19-209ENST00000514013 ADAMTS7Q9UKP4 1686 aa12.67□□□□□ -0.38
SH3D19-209ENST00000514013 ZC3H4Q9UPT8 1303 aaKnown RBP12.66□□□□□ -0.38
SH3D19-209ENST00000514013 NFKBIEO00221 500 aa12.66□□□□□ -0.38
SH3D19-209ENST00000514013 LMNB1P20700 586 aa12.66□□□□□ -0.38
SH3D19-209ENST00000514013 TM4SF1P30408 202 aa12.66□□□□□ -0.38
SH3D19-209ENST00000514013 KIF20BQ96Q89 1820 aa12.66□□□□□ -0.38
SH3D19-209ENST00000514013 ERVV-2B6SEH9 535 aa12.65□□□□□ -0.38
SH3D19-209ENST00000514013 PTCD1O75127 700 aaKnown RBP12.65□□□□□ -0.38
SH3D19-209ENST00000514013 VARS2Q5ST30 1063 aaKnown RBP12.65□□□□□ -0.38
SH3D19-209ENST00000514013 EIF4A2Q14240 407 aaKnown RBP12.64□□□□□ -0.39
SH3D19-209ENST00000514013 INTS5Q6P9B9 1019 aaKnown RBP12.64□□□□□ -0.39
SH3D19-209ENST00000514013 CARMIL3Q8ND23 1372 aa12.64□□□□□ -0.39
SH3D19-209ENST00000514013 POLKQ9UBT6 870 aa12.63□□□□□ -0.39
SH3D19-209ENST00000514013 TJP1Q07157 1748 aa12.62□□□□□ -0.39
SH3D19-209ENST00000514013 TIAM2Q8IVF5 1701 aa12.62□□□□□ -0.39
SH3D19-209ENST00000514013 CABP4P57796 275 aa12.62□□□□□ -0.39
SH3D19-209ENST00000514013 NFIXQ14938 502 aa12.62□□□□□ -0.39
SH3D19-209ENST00000514013 USPL1Q5W0Q7 1092 aa12.62□□□□□ -0.39
SH3D19-209ENST00000514013 MICALL2Q8IY33 904 aa12.62□□□□□ -0.39
SH3D19-209ENST00000514013 RNF166Q96A37 237 aaPredicted RBP12.62□□□□□ -0.39
SH3D19-209ENST00000514013 CNTNAP1P78357 1384 aa12.61□□□□□ -0.39
SH3D19-209ENST00000514013 BCL2L12Q9HB09 334 aa12.61□□□□□ -0.39
SH3D19-209ENST00000514013 PRDM10Q9NQV6 1147 aa12.61□□□□□ -0.39
SH3D19-209ENST00000514013 SOS1Q07889 1333 aaPredicted RBP12.61□□□□□ -0.39
SH3D19-209ENST00000514013 FAM161AQ3B820 660 aa12.6□□□□□ -0.39
SH3D19-209ENST00000514013 ZNF530Q6P9A1 599 aaPredicted RBP12.6□□□□□ -0.39
SH3D19-209ENST00000514013 TMEM92Q6UXU6 159 aa12.6□□□□□ -0.39
SH3D19-209ENST00000514013 DNAJC10Q8IXB1 793 aa12.6□□□□□ -0.39
SH3D19-209ENST00000514013 ZSWIM6Q9HCJ5 1215 aa12.6□□□□□ -0.39
SH3D19-209ENST00000514013 AEBP1Q8IUX7 1158 aa12.59□□□□□ -0.39
SH3D19-209ENST00000514013 TTLL6Q8N841 843 aa12.59□□□□□ -0.39
SH3D19-209ENST00000514013 NFATC2IPQ8NCF5 419 aa12.59□□□□□ -0.39
SH3D19-209ENST00000514013 HSP90AB1P08238 724 aaKnown RBP12.58□□□□□ -0.4
SH3D19-209ENST00000514013 C2CD5Q86YS7 1000 aa12.58□□□□□ -0.4
SH3D19-209ENST00000514013 NRXN2Q9P2S2 1712 aa12.58□□□□□ -0.4
SH3D19-209ENST00000514013 PASKQ96RG2 1323 aa12.58□□□□□ -0.4
SH3D19-209ENST00000514013 DLEC1Q9Y238 1755 aa12.57□□□□□ -0.4
SH3D19-209ENST00000514013 DDNO94850 711 aaPredicted RBP12.57□□□□□ -0.4
SH3D19-209ENST00000514013 SERPINB2P05120 415 aa12.57□□□□□ -0.4
SH3D19-209ENST00000514013 TNNT2P45379 298 aaPredicted RBP12.57□□□□□ -0.4
SH3D19-209ENST00000514013 VEGFBP49765 207 aa12.57□□□□□ -0.4
SH3D19-209ENST00000514013 LBX1P52954 281 aa12.57□□□□□ -0.4
SH3D19-209ENST00000514013 AFDNP55196 1824 aaKnown RBP12.57□□□□□ -0.4
SH3D19-209ENST00000514013 SLC24A1O60721 1099 aa12.56□□□□□ -0.4
SH3D19-209ENST00000514013 ZPR1O75312 459 aa12.56□□□□□ -0.4
SH3D19-209ENST00000514013 CTCFP49711 727 aaPredicted RBP12.56□□□□□ -0.4
SH3D19-209ENST00000514013 MTHFSP49914 203 aa12.56□□□□□ -0.4
SH3D19-209ENST00000514013 ERFEQ4G0M1 354 aa12.56□□□□□ -0.4
SH3D19-209ENST00000514013 PLEKHO1Q53GL0 409 aaPredicted RBP12.56□□□□□ -0.4
SH3D19-209ENST00000514013 ABHD8Q96I13 439 aa12.56□□□□□ -0.4
SH3D19-209ENST00000514013 NARFQ9UHQ1 456 aa12.56□□□□□ -0.4
SH3D19-209ENST00000514013 ZBTB1Q9Y2K1 713 aa12.56□□□□□ -0.4
SH3D19-209ENST00000514013 COL15A1P39059 1388 aa12.56□□□□□ -0.4
SH3D19-209ENST00000514013 C21orf2O43822 256 aa12.55□□□□□ -0.4
SH3D19-209ENST00000514013 CYP19A1P11511 503 aaPredicted RBP12.55□□□□□ -0.4
SH3D19-209ENST00000514013 ZNF687Q8N1G0 1237 aa12.55□□□□□ -0.4
SH3D19-209ENST00000514013 CCDC24Q8N4L8 307 aa12.55□□□□□ -0.4
SH3D19-209ENST00000514013 WBP1LQ9NX94 342 aa12.55□□□□□ -0.4
SH3D19-209ENST00000514013 HSPA8P11142 646 aaKnown RBP12.54□□□□□ -0.4
SH3D19-209ENST00000514013 H0YIN7 160 aa12.53□□□□□ -0.4
SH3D19-209ENST00000514013 ITGBL1O95965 494 aaPredicted RBP12.53□□□□□ -0.4
SH3D19-209ENST00000514013 SLC39A6Q13433 755 aa12.53□□□□□ -0.4
SH3D19-209ENST00000514013 GPR153Q6NV75 609 aa12.53□□□□□ -0.4
SH3D19-209ENST00000514013 BICDL1Q6ZP65 573 aa12.53□□□□□ -0.4
SH3D19-209ENST00000514013 CCDC88AQ3V6T2 1871 aa12.53□□□□□ -0.4
SH3D19-209ENST00000514013 COL11A2P13942 1736 aaPredicted RBP12.52□□□□□ -0.41
SH3D19-209ENST00000514013 AMOTQ4VCS5 1084 aa12.52□□□□□ -0.41
SH3D19-209ENST00000514013 AIDAQ96BJ3 306 aa12.52□□□□□ -0.41
SH3D19-209ENST00000514013 MS4A4AQ96JQ5 239 aa12.52□□□□□ -0.41
SH3D19-209ENST00000514013 ANKRD31Q8N7Z5 1873 aa12.51□□□□□ -0.41
SH3D19-209ENST00000514013 RIOK3O14730 519 aaKnown RBP12.51□□□□□ -0.41
SH3D19-209ENST00000514013 C1orf141Q5JVX7 400 aa12.51□□□□□ -0.41
SH3D19-209ENST00000514013 LDHDQ86WU2 507 aa12.51□□□□□ -0.41
SH3D19-209ENST00000514013 ZNF622Q969S3 477 aaKnown RBP eCLIP12.51□□□□□ -0.41
SH3D19-209ENST00000514013 TAOK3Q9H2K8 898 aa12.51□□□□□ -0.41
SH3D19-209ENST00000514013 TAF1DQ9H5J8 278 aaPredicted RBP12.51□□□□□ -0.41
SH3D19-209ENST00000514013 LGR6Q9HBX8 967 aa12.51□□□□□ -0.41
SH3D19-209ENST00000514013 LTBP3Q9NS15 1303 aa12.51□□□□□ -0.41
SH3D19-209ENST00000514013 TMEM88BA6NKF7 163 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms