RNA–Protein interactions for RNA: ENST00000513997.1

DDX60-205, Transcript of DExD/H-box helicase 60, humanhuman

TSL 3

Gene DDX60, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60-205ENST00000513997 ESPNB1AK53 854 aa11.67□□□□□ -0.54
DDX60-205ENST00000513997 NBPF20Q3BBV1 942 aa11.67□□□□□ -0.54
DDX60-205ENST00000513997 ZNF394Q53GI3 561 aa11.67□□□□□ -0.54
DDX60-205ENST00000513997 TSEN2Q8NCE0 465 aaKnown RBP11.67□□□□□ -0.54
DDX60-205ENST00000513997 FAM129BQ96TA1 746 aa11.67□□□□□ -0.54
DDX60-205ENST00000513997 PCDH12Q9NPG4 1184 aa11.67□□□□□ -0.54
DDX60-205ENST00000513997 FAN1Q9Y2M0 1017 aa11.67□□□□□ -0.54
DDX60-205ENST00000513997 FOXC1Q12948 553 aa11.66□□□□□ -0.54
DDX60-205ENST00000513997 ARID5BQ14865 1188 aa11.66□□□□□ -0.54
DDX60-205ENST00000513997 VASH1Q7L8A9 365 aaPredicted RBP11.66□□□□□ -0.54
DDX60-205ENST00000513997 FILIP1Q7Z7B0 1213 aa11.66□□□□□ -0.54
DDX60-205ENST00000513997 ALKBH8Q96BT7 664 aaKnown RBP11.66□□□□□ -0.54
DDX60-205ENST00000513997 KCTD15Q96SI1 283 aaPredicted RBP11.66□□□□□ -0.54
DDX60-205ENST00000513997 IFT57Q9NWB7 429 aa11.66□□□□□ -0.54
DDX60-205ENST00000513997 PCDHGB7Q9Y5F8 929 aa11.66□□□□□ -0.54
DDX60-205ENST00000513997 TLL2Q9Y6L7 1015 aa11.66□□□□□ -0.54
DDX60-205ENST00000513997 ENPP3O14638 875 aa11.65□□□□□ -0.54
DDX60-205ENST00000513997 GPR182O15218 404 aa11.65□□□□□ -0.54
DDX60-205ENST00000513997 GDF9O60383 454 aa11.65□□□□□ -0.54
DDX60-205ENST00000513997 GRM5P41594 1212 aa11.65□□□□□ -0.54
DDX60-205ENST00000513997 TAF7LQ5H9L4 462 aa11.65□□□□□ -0.54
DDX60-205ENST00000513997 MORC4Q8TE76 937 aa11.65□□□□□ -0.54
DDX60-205ENST00000513997 CCDC87Q9NVE4 849 aa11.65□□□□□ -0.54
DDX60-205ENST00000513997 CCDC194A0A1B0GVG4 234 aa11.64□□□□□ -0.55
DDX60-205ENST00000513997 FOXO3O43524 673 aa11.64□□□□□ -0.55
DDX60-205ENST00000513997 FZD6O60353 706 aa11.64□□□□□ -0.55
DDX60-205ENST00000513997 RGS20O76081 388 aa11.64□□□□□ -0.55
DDX60-205ENST00000513997 PLEKHG6Q3KR16 790 aa11.64□□□□□ -0.55
DDX60-205ENST00000513997 ALG1LQ6GMV1 187 aa11.64□□□□□ -0.55
DDX60-205ENST00000513997 CRELD1Q96HD1 420 aa11.64□□□□□ -0.55
DDX60-205ENST00000513997 PEX14O75381 377 aa11.63□□□□□ -0.55
DDX60-205ENST00000513997 GNA15P30679 374 aa11.63□□□□□ -0.55
DDX60-205ENST00000513997 ENOX2Q16206 610 aaKnown RBP11.63□□□□□ -0.55
DDX60-205ENST00000513997 RNF20Q5VTR2 975 aa11.63□□□□□ -0.55
DDX60-205ENST00000513997 USP48Q86UV5 1035 aa11.63□□□□□ -0.55
DDX60-205ENST00000513997 SEPT12Q8IYM1 358 aa11.63□□□□□ -0.55
DDX60-205ENST00000513997 GAS2L2Q8NHY3 880 aa11.63□□□□□ -0.55
DDX60-205ENST00000513997 K7ELQ4 463 aaPredicted RBP11.62□□□□□ -0.55
DDX60-205ENST00000513997 IGFBP4P22692 258 aa11.62□□□□□ -0.55
DDX60-205ENST00000513997 TRIM67Q6ZTA4 783 aa11.62□□□□□ -0.55
DDX60-205ENST00000513997 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.62□□□□□ -0.55
DDX60-205ENST00000513997 IRF2BPLQ9H1B7 796 aa11.62□□□□□ -0.55
DDX60-205ENST00000513997 SRA1Q9HD15 236 aaKnown RBP11.62□□□□□ -0.55
DDX60-205ENST00000513997 DNAJC6O75061 913 aa11.61□□□□□ -0.55
DDX60-205ENST00000513997 CTSHP09668 335 aa11.61□□□□□ -0.55
DDX60-205ENST00000513997 EIF1AXP47813 144 aaKnown RBP11.61□□□□□ -0.55
DDX60-205ENST00000513997 INTS6LQ5JSJ4 861 aaKnown RBP11.61□□□□□ -0.55
DDX60-205ENST00000513997 ALKBH2Q6NS38 261 aa11.61□□□□□ -0.55
DDX60-205ENST00000513997 RPUSD2Q8IZ73 545 aaKnown RBP11.61□□□□□ -0.55
DDX60-205ENST00000513997 PNMA6FA0A0J9YX94 578 aa11.6□□□□□ -0.55
DDX60-205ENST00000513997 ADH1CP00326 375 aa11.6□□□□□ -0.55
DDX60-205ENST00000513997 PTPN12Q05209 780 aaKnown RBP11.6□□□□□ -0.55
DDX60-205ENST00000513997 SNIP1Q8TAD8 396 aaKnown RBP11.6□□□□□ -0.55
DDX60-205ENST00000513997 TNFRSF10AO00220 468 aa11.59□□□□□ -0.55
DDX60-205ENST00000513997 ALDH1A1P00352 501 aa11.59□□□□□ -0.55
DDX60-205ENST00000513997 ATF4P18848 351 aaPredicted RBP11.59□□□□□ -0.55
DDX60-205ENST00000513997 FSHRP23945 695 aa11.59□□□□□ -0.55
DDX60-205ENST00000513997 GJA8P48165 433 aa11.59□□□□□ -0.55
DDX60-205ENST00000513997 SERINC3Q13530 473 aa11.59□□□□□ -0.55
DDX60-205ENST00000513997 NBPF6Q5VWK0 638 aa11.59□□□□□ -0.55
DDX60-205ENST00000513997 CKAP2LQ8IYA6 745 aa11.59□□□□□ -0.55
DDX60-205ENST00000513997 NBPF4Q96M43 638 aa11.59□□□□□ -0.55
DDX60-205ENST00000513997 SPC25Q9HBM1 224 aa11.59□□□□□ -0.55
DDX60-205ENST00000513997 RAB15P59190 212 aa11.58□□□□□ -0.56
DDX60-205ENST00000513997 PRR20EP86478 221 aa11.58□□□□□ -0.56
DDX60-205ENST00000513997 PRR20CP86479 221 aa11.58□□□□□ -0.56
DDX60-205ENST00000513997 PRR20DP86480 221 aa11.58□□□□□ -0.56
DDX60-205ENST00000513997 PRR20BP86481 221 aa11.58□□□□□ -0.56
DDX60-205ENST00000513997 PRR20AP86496 221 aa11.58□□□□□ -0.56
DDX60-205ENST00000513997 NR5A1Q13285 461 aa11.58□□□□□ -0.56
DDX60-205ENST00000513997 AAMPQ13685 434 aa11.58□□□□□ -0.56
DDX60-205ENST00000513997 MKL1Q969V6 931 aa11.58□□□□□ -0.56
DDX60-205ENST00000513997 AK5Q9Y6K8 562 aa11.58□□□□□ -0.56
DDX60-205ENST00000513997 ERVH48-1M5A8F1 160 aa11.57□□□□□ -0.56
DDX60-205ENST00000513997 USP4Q13107 963 aa11.57□□□□□ -0.56
DDX60-205ENST00000513997 NIF3L1Q9GZT8 377 aa11.57□□□□□ -0.56
DDX60-205ENST00000513997 TOR4AQ9NXH8 423 aa11.57□□□□□ -0.56
DDX60-205ENST00000513997 DDX56Q9NY93 547 aaKnown RBP11.57□□□□□ -0.56
DDX60-205ENST00000513997 C16orf46Q6P387 395 aa11.56□□□□□ -0.56
DDX60-205ENST00000513997 SMC5Q8IY18 1101 aa11.56□□□□□ -0.56
DDX60-205ENST00000513997 CYP4X1Q8N118 509 aa11.56□□□□□ -0.56
DDX60-205ENST00000513997 SAP130Q9H0E3 1048 aa11.56□□□□□ -0.56
DDX60-205ENST00000513997 TTC24A2A3L6 582 aaPredicted RBP11.55□□□□□ -0.56
DDX60-205ENST00000513997 J3QL48 77 aa11.55□□□□□ -0.56
DDX60-205ENST00000513997 U2SURPO15042 1029 aaKnown RBP11.55□□□□□ -0.56
DDX60-205ENST00000513997 NR3C2P08235 984 aa11.55□□□□□ -0.56
DDX60-205ENST00000513997 HS2ST1Q7LGA3 356 aa11.55□□□□□ -0.56
DDX60-205ENST00000513997 FBF1Q8TES7 1133 aa11.55□□□□□ -0.56
DDX60-205ENST00000513997 STAG1Q8WVM7 1258 aa11.55□□□□□ -0.56
DDX60-205ENST00000513997 RNPC3Q96LT9 517 aaKnown RBP11.55□□□□□ -0.56
DDX60-205ENST00000513997 FRMD6Q96NE9 622 aa11.55□□□□□ -0.56
DDX60-205ENST00000513997 PCDHB11Q9Y5F2 797 aa11.55□□□□□ -0.56
DDX60-205ENST00000513997 S100BP04271 92 aaPredicted RBP11.54□□□□□ -0.56
DDX60-205ENST00000513997 PLEKHG4Q58EX7 1191 aa11.54□□□□□ -0.56
DDX60-205ENST00000513997 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.54□□□□□ -0.56
DDX60-205ENST00000513997 CFHR5Q9BXR6 569 aa11.54□□□□□ -0.56
DDX60-205ENST00000513997 PRKAB1Q9Y478 270 aa11.54□□□□□ -0.56
DDX60-205ENST00000513997 DHX9Q08211 1270 aaKnown RBP11.53□□□□□ -0.56
DDX60-205ENST00000513997 CCDC116Q8IYX3 515 aa11.53□□□□□ -0.56
DDX60-205ENST00000513997 GABBR1Q9UBS5 961 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms