RNA–Protein interactions for RNA: ENST00000513846.1

GAPDHP60-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase pseudogene 60, humanhuman

BASIC

Gene GAPDHP60, Length 995 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP60-201ENST00000513846 TGFB2P61812 414 aa12.69□□□□□ -0.38
GAPDHP60-201ENST00000513846 PRR5LQ6MZQ0 368 aa12.69□□□□□ -0.38
GAPDHP60-201ENST00000513846 NECTIN2Q92692 538 aa12.69□□□□□ -0.38
GAPDHP60-201ENST00000513846 ATP10DQ9P241 1426 aa12.69□□□□□ -0.38
GAPDHP60-201ENST00000513846 FER1L6Q2WGJ9 1857 aa12.68□□□□□ -0.38
GAPDHP60-201ENST00000513846 PDIA6Q15084 440 aa12.68□□□□□ -0.38
GAPDHP60-201ENST00000513846 PNISRQ8TF01 805 aaKnown RBP12.68□□□□□ -0.38
GAPDHP60-201ENST00000513846 LAS1LQ9Y4W2 734 aaKnown RBP12.68□□□□□ -0.38
GAPDHP60-201ENST00000513846 ABCC12Q96J65 1359 aa12.68□□□□□ -0.38
GAPDHP60-201ENST00000513846 GRIN3BO60391 1043 aa12.67□□□□□ -0.38
GAPDHP60-201ENST00000513846 FAM177BA6PVY3 158 aa12.66□□□□□ -0.38
GAPDHP60-201ENST00000513846 CHL1O00533 1208 aa12.66□□□□□ -0.38
GAPDHP60-201ENST00000513846 EIF2S2P20042 333 aaKnown RBP12.66□□□□□ -0.38
GAPDHP60-201ENST00000513846 PRELPP51888 382 aa12.66□□□□□ -0.38
GAPDHP60-201ENST00000513846 LMOD3Q0VAK6 560 aa12.66□□□□□ -0.38
GAPDHP60-201ENST00000513846 SLC51AQ86UW1 340 aa12.66□□□□□ -0.38
GAPDHP60-201ENST00000513846 ZBTB3Q9H5J0 574 aa12.66□□□□□ -0.38
GAPDHP60-201ENST00000513846 UBN2Q6ZU65 1347 aa12.65□□□□□ -0.38
GAPDHP60-201ENST00000513846 RASSF7Q02833 373 aa12.65□□□□□ -0.38
GAPDHP60-201ENST00000513846 MRS2Q9HD23 443 aa12.65□□□□□ -0.38
GAPDHP60-201ENST00000513846 MBIPQ9NS73 344 aa12.65□□□□□ -0.38
GAPDHP60-201ENST00000513846 DDX60Q8IY21 1712 aaKnown RBP12.65□□□□□ -0.38
GAPDHP60-201ENST00000513846 MAP3K15Q6ZN16 1313 aa12.64□□□□□ -0.39
GAPDHP60-201ENST00000513846 TAF1P21675 1872 aa12.64□□□□□ -0.39
GAPDHP60-201ENST00000513846 ZNF853P0CG23 659 aa12.64□□□□□ -0.39
GAPDHP60-201ENST00000513846 C2CD5Q86YS7 1000 aa12.64□□□□□ -0.39
GAPDHP60-201ENST00000513846 ZNF428Q96B54 188 aa12.64□□□□□ -0.39
GAPDHP60-201ENST00000513846 PIM2Q9P1W9 311 aa12.64□□□□□ -0.39
GAPDHP60-201ENST00000513846 COL4A1P02462 1669 aa12.64□□□□□ -0.39
GAPDHP60-201ENST00000513846 DICER1Q9UPY3 1922 aaKnown RBP12.63□□□□□ -0.39
GAPDHP60-201ENST00000513846 DALRD3Q5D0E6 543 aaKnown RBP12.63□□□□□ -0.39
GAPDHP60-201ENST00000513846 CNBD1Q8NA66 436 aa12.63□□□□□ -0.39
GAPDHP60-201ENST00000513846 ZNF526Q8TF50 670 aaPredicted RBP12.63□□□□□ -0.39
GAPDHP60-201ENST00000513846 SETDB2Q96T68 719 aa12.63□□□□□ -0.39
GAPDHP60-201ENST00000513846 NIP7Q9Y221 180 aaKnown RBP eCLIP12.63□□□□□ -0.39
GAPDHP60-201ENST00000513846 ANP32CO43423 234 aa12.62□□□□□ -0.39
GAPDHP60-201ENST00000513846 GPTP24298 496 aa12.62□□□□□ -0.39
GAPDHP60-201ENST00000513846 ARHGAP27Q6ZUM4 889 aa12.62□□□□□ -0.39
GAPDHP60-201ENST00000513846 NUTM1Q86Y26 1132 aa12.62□□□□□ -0.39
GAPDHP60-201ENST00000513846 CHPF2Q9P2E5 772 aa12.62□□□□□ -0.39
GAPDHP60-201ENST00000513846 ZNF219Q9P2Y4 722 aaPredicted RBP12.62□□□□□ -0.39
GAPDHP60-201ENST00000513846 CLEC4GQ6UXB4 293 aa12.61□□□□□ -0.39
GAPDHP60-201ENST00000513846 NBPF5PQ86XG9 351 aaPredicted RBP12.61□□□□□ -0.39
GAPDHP60-201ENST00000513846 CFAP44Q96MT7 982 aa12.61□□□□□ -0.39
GAPDHP60-201ENST00000513846 BABAM1Q9NWV8 329 aa12.61□□□□□ -0.39
GAPDHP60-201ENST00000513846 ERBB4Q15303 1308 aa12.61□□□□□ -0.39
GAPDHP60-201ENST00000513846 NFKBIEO00221 500 aa12.6□□□□□ -0.39
GAPDHP60-201ENST00000513846 SUSD4Q5VX71 490 aa12.6□□□□□ -0.39
GAPDHP60-201ENST00000513846 OLFM4Q6UX06 510 aa12.6□□□□□ -0.39
GAPDHP60-201ENST00000513846 C3orf67Q6ZVT6 689 aa12.6□□□□□ -0.39
GAPDHP60-201ENST00000513846 NPM2Q86SE8 214 aaKnown RBP12.6□□□□□ -0.39
GAPDHP60-201ENST00000513846 XAGE3Q8WTP9 111 aa12.6□□□□□ -0.39
GAPDHP60-201ENST00000513846 TSR2Q969E8 191 aaKnown RBP12.6□□□□□ -0.39
GAPDHP60-201ENST00000513846 ZNF622Q969S3 477 aaKnown RBP eCLIP12.6□□□□□ -0.39
GAPDHP60-201ENST00000513846 BRIP1Q9BX63 1249 aa12.6□□□□□ -0.39
GAPDHP60-201ENST00000513846 ZNF652Q9Y2D9 606 aa12.6□□□□□ -0.39
GAPDHP60-201ENST00000513846 H0YIN7 160 aa12.59□□□□□ -0.39
GAPDHP60-201ENST00000513846 ELL2O00472 640 aaPredicted RBP12.59□□□□□ -0.39
GAPDHP60-201ENST00000513846 AIMP1Q12904 312 aaKnown RBP12.59□□□□□ -0.39
GAPDHP60-201ENST00000513846 ERFEQ4G0M1 354 aa12.59□□□□□ -0.39
GAPDHP60-201ENST00000513846 DUSP27Q5VZP5 1158 aa12.59□□□□□ -0.39
GAPDHP60-201ENST00000513846 KIF6Q6ZMV9 814 aa12.59□□□□□ -0.39
GAPDHP60-201ENST00000513846 TSPYL6Q8N831 410 aa12.59□□□□□ -0.39
GAPDHP60-201ENST00000513846 C8orf58Q8NAV2 365 aa12.59□□□□□ -0.39
GAPDHP60-201ENST00000513846 IFT57Q9NWB7 429 aa12.59□□□□□ -0.39
GAPDHP60-201ENST00000513846 SALL2Q9Y467 1007 aaPredicted RBP12.59□□□□□ -0.39
GAPDHP60-201ENST00000513846 ERVV-1B6SEH8 477 aa12.58□□□□□ -0.4
GAPDHP60-201ENST00000513846 NTSR2O95665 410 aa12.58□□□□□ -0.4
GAPDHP60-201ENST00000513846 SRGNP10124 158 aa12.58□□□□□ -0.4
GAPDHP60-201ENST00000513846 ST5P78524 1137 aa12.58□□□□□ -0.4
GAPDHP60-201ENST00000513846 HDGFL1Q5TGJ6 251 aa12.58□□□□□ -0.4
GAPDHP60-201ENST00000513846 C9orf131Q5VYM1 1079 aa12.58□□□□□ -0.4
GAPDHP60-201ENST00000513846 GIGYF2Q6Y7W6 1299 aaKnown RBP12.58□□□□□ -0.4
GAPDHP60-201ENST00000513846 COPS6Q7L5N1 327 aa12.58□□□□□ -0.4
GAPDHP60-201ENST00000513846 WWC1Q8IX03 1113 aa12.58□□□□□ -0.4
GAPDHP60-201ENST00000513846 ZNF34Q8IZ26 560 aa12.58□□□□□ -0.4
GAPDHP60-201ENST00000513846 SYNE4Q8N205 404 aa12.58□□□□□ -0.4
GAPDHP60-201ENST00000513846 TTLL6Q8N841 843 aa12.58□□□□□ -0.4
GAPDHP60-201ENST00000513846 SNED1Q8TER0 1413 aa12.58□□□□□ -0.4
GAPDHP60-201ENST00000513846 NPHP1O15259 732 aa12.57□□□□□ -0.4
GAPDHP60-201ENST00000513846 C21orf2O43822 256 aa12.57□□□□□ -0.4
GAPDHP60-201ENST00000513846 PDE6BP35913 854 aa12.57□□□□□ -0.4
GAPDHP60-201ENST00000513846 PRPF40BQ6NWY9 871 aaKnown RBP12.57□□□□□ -0.4
GAPDHP60-201ENST00000513846 SPINK5Q9NQ38 1064 aaPredicted RBP12.57□□□□□ -0.4
GAPDHP60-201ENST00000513846 DDX21Q9NR30 783 aaKnown RBP eCLIP12.57□□□□□ -0.4
GAPDHP60-201ENST00000513846 COL4A5P29400 1685 aa12.57□□□□□ -0.4
GAPDHP60-201ENST00000513846 IBTKQ9P2D0 1353 aaPredicted RBP12.56□□□□□ -0.4
GAPDHP60-201ENST00000513846 TCERG1O14776 1098 aaKnown RBP12.56□□□□□ -0.4
GAPDHP60-201ENST00000513846 RGL2O15211 777 aa12.56□□□□□ -0.4
GAPDHP60-201ENST00000513846 FAM9BQ8IZU0 186 aa12.56□□□□□ -0.4
GAPDHP60-201ENST00000513846 PHAXQ9H814 394 aaKnown RBP12.56□□□□□ -0.4
GAPDHP60-201ENST00000513846 RNF181Q9P0P0 153 aa12.56□□□□□ -0.4
GAPDHP60-201ENST00000513846 CEP350Q5VT06 3117 aa12.55□□□□□ -0.4
GAPDHP60-201ENST00000513846 RIC1Q4ADV7 1423 aa12.55□□□□□ -0.4
GAPDHP60-201ENST00000513846 KLRG2A4D1S0 409 aaPredicted RBP12.55□□□□□ -0.4
GAPDHP60-201ENST00000513846 GNAI1P63096 354 aa12.55□□□□□ -0.4
GAPDHP60-201ENST00000513846 STYK1Q6J9G0 422 aa12.55□□□□□ -0.4
GAPDHP60-201ENST00000513846 SPEF2Q9C093 1822 aa12.55□□□□□ -0.4
GAPDHP60-201ENST00000513846 LRRC37AA6NMS7 1700 aa12.54□□□□□ -0.4
GAPDHP60-201ENST00000513846 KIF3CO14782 793 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms