RNA–Protein interactions for RNA: ENST00000513499.5

CCNH-210, Transcript of cyclin H, human

TSL 3

Gene CCNH, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNH-210	ENST00000513499	PXDNL	A1KZ92	1463 aa		11.25	□□□□□ -0.61
CCNH-210	ENST00000513499	FOSB	P53539	338 aa		11.24	□□□□□ -0.61
CCNH-210	ENST00000513499	ARHGAP27	Q6ZUM4	889 aa		11.24	□□□□□ -0.61
CCNH-210	ENST00000513499	ATP6V1A	P38606	617 aa		11.23	□□□□□ -0.61
CCNH-210	ENST00000513499	TGFB2	P61812	414 aa		11.23	□□□□□ -0.61
CCNH-210	ENST00000513499	DMRTA1	Q5VZB9	504 aa		11.23	□□□□□ -0.61
CCNH-210	ENST00000513499	KCNK17	Q96T54	332 aa		11.23	□□□□□ -0.61
CCNH-210	ENST00000513499	SMG6	Q86US8	1419 aa	Known RBP	11.23	□□□□□ -0.61
CCNH-210	ENST00000513499	NSD3	Q9BZ95	1437 aa		11.23	□□□□□ -0.61
CCNH-210	ENST00000513499	DPEP1	P16444	411 aa		11.22	□□□□□ -0.61
CCNH-210	ENST00000513499	TAF1L	Q8IZX4	1826 aa		11.22	□□□□□ -0.61
CCNH-210	ENST00000513499	KLRG1	Q96E93	195 aa		11.22	□□□□□ -0.61
CCNH-210	ENST00000513499	CIC	Q96RK0	1608 aa	Predicted RBP	11.22	□□□□□ -0.61
CCNH-210	ENST00000513499	ATG3	Q9NT62	314 aa		11.22	□□□□□ -0.61
CCNH-210	ENST00000513499	EMILIN1	Q9Y6C2	1016 aa		11.22	□□□□□ -0.61
CCNH-210	ENST00000513499	FLT4	P35916	1363 aa		11.21	□□□□□ -0.61
CCNH-210	ENST00000513499	FCHSD2	O94868	740 aa		11.21	□□□□□ -0.61
CCNH-210	ENST00000513499	KCNA3	P22001	575 aa		11.21	□□□□□ -0.61
CCNH-210	ENST00000513499	C9orf131	Q5VYM1	1079 aa		11.21	□□□□□ -0.61
CCNH-210	ENST00000513499	JMY	Q8N9B5	988 aa		11.21	□□□□□ -0.61
CCNH-210	ENST00000513499	RBM46	Q8TBY0	533 aa	Known RBP	11.21	□□□□□ -0.61
CCNH-210	ENST00000513499	SLC4A9	Q96Q91	983 aa		11.21	□□□□□ -0.61
CCNH-210	ENST00000513499	TMOD3	Q9NYL9	352 aa		11.21	□□□□□ -0.61
CCNH-210	ENST00000513499	TMF1	P82094	1093 aa		11.2	□□□□□ -0.62
CCNH-210	ENST00000513499	TRAPPC3L	Q5T215	181 aa		11.2	□□□□□ -0.62
CCNH-210	ENST00000513499	NLGN1	Q8N2Q7	840 aa		11.2	□□□□□ -0.62
CCNH-210	ENST00000513499	ARHGEF1	Q92888	912 aa	Known RBP	11.2	□□□□□ -0.62
CCNH-210	ENST00000513499	ZDHHC16	Q969W1	377 aa		11.2	□□□□□ -0.62
CCNH-210	ENST00000513499	SPG7	Q9UQ90	795 aa		11.2	□□□□□ -0.62
CCNH-210	ENST00000513499	PCDHGA10	Q9Y5H3	936 aa		11.2	□□□□□ -0.62
CCNH-210	ENST00000513499	UBR3	Q6ZT12	1888 aa		11.2	□□□□□ -0.62
CCNH-210	ENST00000513499	DDX12P	Q92771	950 aa		11.19	□□□□□ -0.62
CCNH-210	ENST00000513499	ADAM33	Q9BZ11	813 aa		11.19	□□□□□ -0.62
CCNH-210	ENST00000513499	RTCB	Q9Y3I0	505 aa	Known RBP	11.19	□□□□□ -0.62
CCNH-210	ENST00000513499	C10orf71	Q711Q0	1435 aa		11.18	□□□□□ -0.62
CCNH-210	ENST00000513499	KIF24	Q5T7B8	1368 aa		11.18	□□□□□ -0.62
CCNH-210	ENST00000513499	PPM1G	O15355	546 aa	Predicted RBP	11.18	□□□□□ -0.62
CCNH-210	ENST00000513499	GYS1	P13807	737 aa		11.18	□□□□□ -0.62
CCNH-210	ENST00000513499	PHKG2	P15735	406 aa		11.18	□□□□□ -0.62
CCNH-210	ENST00000513499	FSTL1	Q12841	308 aa		11.18	□□□□□ -0.62
CCNH-210	ENST00000513499	EYA1	Q99502	592 aa		11.18	□□□□□ -0.62
CCNH-210	ENST00000513499	CCDC87	Q9NVE4	849 aa		11.18	□□□□□ -0.62
CCNH-210	ENST00000513499	MAP2	P11137	1827 aa	Known RBP	11.18	□□□□□ -0.62
CCNH-210	ENST00000513499	NCAPD2	Q15021	1401 aa		11.18	□□□□□ -0.62
CCNH-210	ENST00000513499	C16orf71	Q8IYS4	520 aa	Predicted RBP	11.17	□□□□□ -0.62
CCNH-210	ENST00000513499	IFNL2	Q8IZJ0	200 aa		11.17	□□□□□ -0.62
CCNH-210	ENST00000513499	TNS4	Q8IZW8	715 aa		11.17	□□□□□ -0.62
CCNH-210	ENST00000513499	CARD14	Q9BXL6	1004 aa		11.17	□□□□□ -0.62
CCNH-210	ENST00000513499	BCL2L12	Q9HB09	334 aa		11.17	□□□□□ -0.62
CCNH-210	ENST00000513499	RRAGC	Q9HB90	399 aa		11.17	□□□□□ -0.62
CCNH-210	ENST00000513499	KIAA1551	Q9HCM1	1747 aa		11.17	□□□□□ -0.62
CCNH-210	ENST00000513499	KDR	P35968	1356 aa		11.16	□□□□□ -0.62
CCNH-210	ENST00000513499	TONSL	Q96HA7	1378 aa		11.16	□□□□□ -0.62
CCNH-210	ENST00000513499	RPS6KA4	O75676	772 aa		11.16	□□□□□ -0.62
CCNH-210	ENST00000513499	RC3H1	Q5TC82	1133 aa	Known RBP	11.16	□□□□□ -0.62
CCNH-210	ENST00000513499	DCAF5	Q96JK2	942 aa		11.16	□□□□□ -0.62
CCNH-210	ENST00000513499	PARP3	Q9Y6F1	533 aa		11.16	□□□□□ -0.62
CCNH-210	ENST00000513499	ITGB4	P16144	1822 aa		11.16	□□□□□ -0.62
CCNH-210	ENST00000513499	KCP	Q6ZWJ8	1503 aa		11.15	□□□□□ -0.62
CCNH-210	ENST00000513499	WASHC2A	Q641Q2	1341 aa		11.15	□□□□□ -0.62
CCNH-210	ENST00000513499	PTPRE	P23469	700 aa		11.15	□□□□□ -0.62
CCNH-210	ENST00000513499	RFC4	P35249	363 aa		11.15	□□□□□ -0.62
CCNH-210	ENST00000513499	PRELP	P51888	382 aa		11.15	□□□□□ -0.62
CCNH-210	ENST00000513499	ADGRD1	Q6QNK2	874 aa		11.15	□□□□□ -0.62
CCNH-210	ENST00000513499	RNF181	Q9P0P0	153 aa		11.15	□□□□□ -0.62
CCNH-210	ENST00000513499	PIM2	Q9P1W9	311 aa		11.15	□□□□□ -0.62
CCNH-210	ENST00000513499	KDM2B	Q8NHM5	1336 aa		11.14	□□□□□ -0.63
CCNH-210	ENST00000513499	N4BP2	Q86UW6	1770 aa	Predicted RBP	11.14	□□□□□ -0.63
CCNH-210	ENST00000513499	CHRNA5	P30532	468 aa		11.14	□□□□□ -0.63
CCNH-210	ENST00000513499	PDIA6	Q15084	440 aa		11.14	□□□□□ -0.63
CCNH-210	ENST00000513499	DALRD3	Q5D0E6	543 aa	Known RBP	11.14	□□□□□ -0.63
CCNH-210	ENST00000513499	PCNT	O95613	3336 aa		11.14	□□□□□ -0.63
CCNH-210	ENST00000513499	PKD1L3	Q7Z443	1732 aa		11.14	□□□□□ -0.63
CCNH-210	ENST00000513499	CNTNAP4	Q9C0A0	1308 aa		11.13	□□□□□ -0.63
CCNH-210	ENST00000513499	WDR90	Q96KV7	1748 aa		11.13	□□□□□ -0.63
CCNH-210	ENST00000513499	DDR1	Q08345	913 aa		11.13	□□□□□ -0.63
CCNH-210	ENST00000513499	TYW1B	Q6NUM6	668 aa		11.13	□□□□□ -0.63
CCNH-210	ENST00000513499	SRP68	Q9UHB9	627 aa	Known RBP	11.13	□□□□□ -0.63
CCNH-210	ENST00000513499	KIF13B	Q9NQT8	1826 aa		11.13	□□□□□ -0.63
CCNH-210	ENST00000513499	PLEKHG2	Q9H7P9	1386 aa		11.13	□□□□□ -0.63
CCNH-210	ENST00000513499	ERVV-2	B6SEH9	535 aa		11.12	□□□□□ -0.63
CCNH-210	ENST00000513499	SMC1B	Q8NDV3	1235 aa		11.12	□□□□□ -0.63
CCNH-210	ENST00000513499	RNF166	Q96A37	237 aa	Predicted RBP	11.12	□□□□□ -0.63
CCNH-210	ENST00000513499	POLK	Q9UBT6	870 aa		11.12	□□□□□ -0.63
CCNH-210	ENST00000513499	SPDYE16	A6NNV3	312 aa	Predicted RBP	11.11	□□□□□ -0.63
CCNH-210	ENST00000513499	EIF4A2	Q14240	407 aa	Known RBP	11.11	□□□□□ -0.63
CCNH-210	ENST00000513499	C4A	P0C0L4	1744 aa		11.1	□□□□□ -0.63
CCNH-210	ENST00000513499	GRXCR2	A6NFK2	248 aa		11.1	□□□□□ -0.63
CCNH-210	ENST00000513499	PTCD1	O75127	700 aa	Known RBP	11.1	□□□□□ -0.63
CCNH-210	ENST00000513499	HSPA1A	P0DMV8	641 aa	Known RBP	11.1	□□□□□ -0.63
CCNH-210	ENST00000513499	HSPA1B	P0DMV9	641 aa	Known RBP	11.1	□□□□□ -0.63
CCNH-210	ENST00000513499	CRKL	P46109	303 aa	Known RBP	11.1	□□□□□ -0.63
CCNH-210	ENST00000513499	RASSF7	Q02833	373 aa		11.1	□□□□□ -0.63
CCNH-210	ENST00000513499	NBR1	Q14596	966 aa		11.1	□□□□□ -0.63
CCNH-210	ENST00000513499	ARIH1	Q9Y4X5	557 aa	Predicted RBP	11.1	□□□□□ -0.63
CCNH-210	ENST00000513499	USP42	Q9H9J4	1324 aa	Known RBP	11.09	□□□□□ -0.63
CCNH-210	ENST00000513499	POLRMT	O00411	1230 aa	Known RBP	11.09	□□□□□ -0.63
CCNH-210	ENST00000513499	TM4SF1	P30408	202 aa		11.09	□□□□□ -0.63
CCNH-210	ENST00000513499	CABP4	P57796	275 aa		11.09	□□□□□ -0.63
CCNH-210	ENST00000513499	KCNV2	Q8TDN2	545 aa		11.09	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms