RNA–Protein interactions for RNA: ENST00000513321.1

NEIL3-202, Transcript of nei like DNA glycosylase 3, humanhuman

TSL 1 (best)

Gene NEIL3, Length 1,528 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-202ENST00000513321 MAP3K15Q6ZN16 1313 aa26.98■■□□□ 1.91
NEIL3-202ENST00000513321 ERVV-1B6SEH8 477 aa26.97■■□□□ 1.91
NEIL3-202ENST00000513321 CT47B1P0C2W7 299 aaPredicted RBP26.97■■□□□ 1.91
NEIL3-202ENST00000513321 PTGER2P43116 358 aa26.97■■□□□ 1.91
NEIL3-202ENST00000513321 ZBTB3Q9H5J0 574 aa26.97■■□□□ 1.91
NEIL3-202ENST00000513321 HLFQ16534 295 aa26.96■■□□□ 1.91
NEIL3-202ENST00000513321 SGIP1Q9BQI5 828 aa26.96■■□□□ 1.91
NEIL3-202ENST00000513321 POLD1P28340 1107 aa26.95■■□□□ 1.91
NEIL3-202ENST00000513321 CLEC4GQ6UXB4 293 aa26.95■■□□□ 1.91
NEIL3-202ENST00000513321 ZNF428Q96B54 188 aa26.95■■□□□ 1.91
NEIL3-202ENST00000513321 ANKRD13DQ6ZTN6 518 aa26.95■■□□□ 1.9
NEIL3-202ENST00000513321 G2E3Q7L622 706 aa26.95■■□□□ 1.9
NEIL3-202ENST00000513321 ZNF652Q9Y2D9 606 aa26.95■■□□□ 1.9
NEIL3-202ENST00000513321 RGL2O15211 777 aa26.94■■□□□ 1.9
NEIL3-202ENST00000513321 MMP10P09238 476 aa26.94■■□□□ 1.9
NEIL3-202ENST00000513321 TM4SF1P30408 202 aa26.94■■□□□ 1.9
NEIL3-202ENST00000513321 NFIXQ14938 502 aa26.93■■□□□ 1.9
NEIL3-202ENST00000513321 TBC1D9BQ66K14 1250 aa26.93■■□□□ 1.9
NEIL3-202ENST00000513321 BICDL1Q6ZP65 573 aa26.93■■□□□ 1.9
NEIL3-202ENST00000513321 SSH1Q8WYL5 1049 aa26.93■■□□□ 1.9
NEIL3-202ENST00000513321 PLBD2Q8NHP8 589 aa26.92■■□□□ 1.9
NEIL3-202ENST00000513321 GIGYF2Q6Y7W6 1299 aaKnown RBP26.91■■□□□ 1.9
NEIL3-202ENST00000513321 ALDH1L2Q3SY69 923 aa26.9■■□□□ 1.9
NEIL3-202ENST00000513321 DDX58O95786 925 aaKnown RBP26.9■■□□□ 1.9
NEIL3-202ENST00000513321 FLIIQ13045 1269 aa26.9■■□□□ 1.9
NEIL3-202ENST00000513321 MRPL50Q8N5N7 158 aaKnown RBP26.9■■□□□ 1.9
NEIL3-202ENST00000513321 PARP3Q9Y6F1 533 aa26.9■■□□□ 1.9
NEIL3-202ENST00000513321 SCN7AQ01118 1682 aa26.89■■□□□ 1.9
NEIL3-202ENST00000513321 DDR1Q08345 913 aa26.89■■□□□ 1.89
NEIL3-202ENST00000513321 RIC3Q7Z5B4 369 aa26.89■■□□□ 1.89
NEIL3-202ENST00000513321 SETDB2Q96T68 719 aa26.89■■□□□ 1.89
NEIL3-202ENST00000513321 BCL2L13Q9BXK5 485 aa26.89■■□□□ 1.89
NEIL3-202ENST00000513321 RARSP54136 660 aaKnown RBP26.88■■□□□ 1.89
NEIL3-202ENST00000513321 NIP7Q9Y221 180 aaKnown RBP eCLIP26.88■■□□□ 1.89
NEIL3-202ENST00000513321 COL24A1Q17RW2 1714 aa26.88■■□□□ 1.89
NEIL3-202ENST00000513321 POLRMTO00411 1230 aaKnown RBP26.87■■□□□ 1.89
NEIL3-202ENST00000513321 SMC4Q9NTJ3 1288 aa26.87■■□□□ 1.89
NEIL3-202ENST00000513321 BCORQ6W2J9 1755 aa26.87■■□□□ 1.89
NEIL3-202ENST00000513321 FKBP5Q13451 457 aaPredicted RBP26.86■■□□□ 1.89
NEIL3-202ENST00000513321 KSR2Q6VAB6 950 aa26.86■■□□□ 1.89
NEIL3-202ENST00000513321 PPP1R1BQ9UD71 204 aaPredicted RBP26.86■■□□□ 1.89
NEIL3-202ENST00000513321 PI4KAP2A4QPH2 592 aa26.85■■□□□ 1.89
NEIL3-202ENST00000513321 TCIRG1Q13488 830 aa26.85■■□□□ 1.89
NEIL3-202ENST00000513321 PI4KAP1Q8N8J0 262 aa26.85■■□□□ 1.89
NEIL3-202ENST00000513321 SERPINB2P05120 415 aa26.85■■□□□ 1.89
NEIL3-202ENST00000513321 GPTP24298 496 aa26.85■■□□□ 1.89
NEIL3-202ENST00000513321 HSP90AB3PQ58FF7 597 aa26.85■■□□□ 1.89
NEIL3-202ENST00000513321 ZNF34Q8IZ26 560 aa26.85■■□□□ 1.89
NEIL3-202ENST00000513321 MAP3K2Q9Y2U5 619 aa26.85■■□□□ 1.89
NEIL3-202ENST00000513321 ATP10DQ9P241 1426 aa26.83■■□□□ 1.89
NEIL3-202ENST00000513321 CARMIL3Q8ND23 1372 aa26.82■■□□□ 1.88
NEIL3-202ENST00000513321 CACNA1FO60840 1977 aa26.82■■□□□ 1.88
NEIL3-202ENST00000513321 ADCY9O60503 1353 aa26.82■■□□□ 1.88
NEIL3-202ENST00000513321 NUP98P52948 1817 aa26.82■■□□□ 1.88
NEIL3-202ENST00000513321 METTL22Q9BUU2 404 aaPredicted RBP26.81■■□□□ 1.88
NEIL3-202ENST00000513321 FAM177BA6PVY3 158 aa26.8■■□□□ 1.88
NEIL3-202ENST00000513321 ATP5J2-PTCD1G3V325 749 aa26.8■■□□□ 1.88
NEIL3-202ENST00000513321 UBN2Q6ZU65 1347 aa26.8■■□□□ 1.88
NEIL3-202ENST00000513321 LRP5O75197 1615 aa26.8■■□□□ 1.88
NEIL3-202ENST00000513321 BRPF1P55201 1214 aaPredicted RBP26.8■■□□□ 1.88
NEIL3-202ENST00000513321 MYD88Q99836 296 aa26.8■■□□□ 1.88
NEIL3-202ENST00000513321 SRCAPQ6ZRS2 3230 aa26.79■■□□□ 1.88
NEIL3-202ENST00000513321 BCAR3O75815 825 aa26.79■■□□□ 1.88
NEIL3-202ENST00000513321 NBPF5PQ86XG9 351 aaPredicted RBP26.79■■□□□ 1.88
NEIL3-202ENST00000513321 ISCA1Q9BUE6 129 aa26.79■■□□□ 1.88
NEIL3-202ENST00000513321 F6X3S4 739 aa26.78■■□□□ 1.88
NEIL3-202ENST00000513321 PARP10Q53GL7 1025 aa26.78■■□□□ 1.88
NEIL3-202ENST00000513321 SUSD4Q5VX71 490 aa26.78■■□□□ 1.88
NEIL3-202ENST00000513321 NLRP10Q86W26 655 aa26.78■■□□□ 1.88
NEIL3-202ENST00000513321 KLHL34Q8N239 644 aa26.78■■□□□ 1.88
NEIL3-202ENST00000513321 DNAAF4Q8WXU2 420 aa26.78■■□□□ 1.88
NEIL3-202ENST00000513321 NOB1Q9ULX3 412 aaKnown RBP26.78■■□□□ 1.88
NEIL3-202ENST00000513321 PTPRCP08575 1304 aa26.77■■□□□ 1.88
NEIL3-202ENST00000513321 TPTE2Q6XPS3 522 aa26.77■■□□□ 1.88
NEIL3-202ENST00000513321 NPHP1O15259 732 aa26.76■■□□□ 1.87
NEIL3-202ENST00000513321 TRIM28Q13263 835 aaKnown RBP26.76■■□□□ 1.87
NEIL3-202ENST00000513321 CNBD1Q8NA66 436 aa26.76■■□□□ 1.87
NEIL3-202ENST00000513321 NEXNQ0ZGT2 675 aa26.75■■□□□ 1.87
NEIL3-202ENST00000513321 PRR5LQ6MZQ0 368 aa26.75■■□□□ 1.87
NEIL3-202ENST00000513321 PPP1R42Q7Z4L9 355 aa26.75■■□□□ 1.87
NEIL3-202ENST00000513321 CCDC24Q8N4L8 307 aa26.75■■□□□ 1.87
NEIL3-202ENST00000513321 FHDC1Q9C0D6 1143 aaPredicted RBP26.75■■□□□ 1.87
NEIL3-202ENST00000513321 ARFGEF2Q9Y6D5 1785 aa26.75■■□□□ 1.87
NEIL3-202ENST00000513321 NYXQ9GZU5 481 aa26.75■■□□□ 1.87
NEIL3-202ENST00000513321 CD2APQ9Y5K6 639 aa26.75■■□□□ 1.87
NEIL3-202ENST00000513321 IGKV5-2P06315 115 aa26.74■■□□□ 1.87
NEIL3-202ENST00000513321 GTF2E1P29083 439 aaPredicted RBP26.74■■□□□ 1.87
NEIL3-202ENST00000513321 UTP14AQ9BVJ6 771 aaKnown RBP26.74■■□□□ 1.87
NEIL3-202ENST00000513321 KIF16BQ96L93 1317 aa26.73■■□□□ 1.87
NEIL3-202ENST00000513321 NTSR2O95665 410 aa26.72■■□□□ 1.87
NEIL3-202ENST00000513321 SLC4A10Q6U841 1118 aa26.72■■□□□ 1.87
NEIL3-202ENST00000513321 NUTM1Q86Y26 1132 aa26.72■■□□□ 1.87
NEIL3-202ENST00000513321 CCDC191Q8NCU4 936 aa26.72■■□□□ 1.87
NEIL3-202ENST00000513321 TRMT112Q9UI30 125 aaKnown RBP26.72■■□□□ 1.87
NEIL3-202ENST00000513321 RCAN3Q9UKA8 241 aa26.72■■□□□ 1.87
NEIL3-202ENST00000513321 ST5P78524 1137 aa26.71■■□□□ 1.87
NEIL3-202ENST00000513321 CWF19L2Q2TBE0 894 aaKnown RBP26.71■■□□□ 1.87
NEIL3-202ENST00000513321 FRAT1Q92837 279 aaPredicted RBP26.71■■□□□ 1.87
NEIL3-202ENST00000513321 SYT17Q9BSW7 474 aa26.71■■□□□ 1.87
NEIL3-202ENST00000513321 AFDNP55196 1824 aaKnown RBP26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms